LOCUS       NM_001408754             751 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus H2B clustered histone 8 (H2bc8), mRNA.
ACCESSION   NM_001408754 XM_225384
VERSION     NM_001408754.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Falk,S.J., Guo,L.Y., Sekulic,N., Smoak,E.M., Mani,T., Logsdon,G.A.,
            Gupta,K., Jansen,L.E., Van Duyne,G.D., Vinogradov,S.A.,
            Lampson,M.A. and Black,B.E.
  TITLE     Chromosomes. CENP-C reshapes and stabilizes CENP-A nucleosomes at
            the centromere
  JOURNAL   Science 348 (6235), 699-703 (2015)
   PUBMED   25954010
REFERENCE   2  (bases 1 to 751)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   3  (bases 1 to 751)
  AUTHORS   Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J., Wauben,M.
            and Stoorvogel,W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   4  (bases 1 to 751)
  AUTHORS   Bonenfant,D., Coulot,M., Towbin,H., Schindler,P. and van Oostrum,J.
  TITLE     Characterization of histone H2A and H2B variants and their
            post-translational modifications by mass spectrometry
  JOURNAL   Mol Cell Proteomics 5 (3), 541-552 (2006)
   PUBMED   16319397
REFERENCE   5  (bases 1 to 751)
  AUTHORS   Tollin,M., Bergman,P., Svenberg,T., Jornvall,H., Gudmundsson,G.H.
            and Agerberth,B.
  TITLE     Antimicrobial peptides in the first line defence of human colon
            mucosa
  JOURNAL   Peptides 24 (4), 523-530 (2003)
   PUBMED   12860195
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Jun 23, 2022 this sequence version replaced XM_225384.7.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360172.1921004.1,
                                        SRR26360186.2717166.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-751               JAXUCZ010000017.1  47404405-47405155
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..751
                     /gene="H2bc8"
                     /gene_synonym="Hist1h2bf; Hist1h2bl; Hist1h2bp"
                     /note="H2B clustered histone 8"
                     /db_xref="GeneID:306969"
                     /db_xref="RGD:1308088"
     exon            1..751
                     /gene="H2bc8"
                     /gene_synonym="Hist1h2bf; Hist1h2bl; Hist1h2bp"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..409
                     /gene="H2bc8"
                     /gene_synonym="Hist1h2bf; Hist1h2bl; Hist1h2bp"
                     /note="histone 1, H2bp; histone cluster 1, H2bp; histone
                     H2B type 1; histone cluster 1, H2bf; histone cluster 1,
                     H2bl; histone H2B type 1-C/E/F/G/I"
                     /codon_start=1
                     /product="histone cluster 1 H2B family member l"
                     /protein_id="NP_001395683.1"
                     /db_xref="GeneID:306969"
                     /db_xref="RGD:1308088"
                     /translation="MPETAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYK
                     VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL
                     LPGELAKHAVSEGTKAVTKYTSSK"
ORIGIN      
        1 gctagaatca tagtgttcca gtcttaacat gcctgaaact gcgaagtccg ctcccgcccc
       61 gaagaagggc tccaagaagg ccgtaaccaa ggcgcagaag aaggatggca agaagcgcaa
      121 gcgcagccgc aaggagagct actcggtgta cgtgtacaag gtgcttaagc aagtgcatcc
      181 ggacacgggc atctcttcca aggccatggg cataatgaac tcgttcgtga acgacatctt
      241 cgagcgcatc gcgggcgagg cgtcgcgcct ggctcattac aacaagcgct cgaccatcac
      301 gtcccgggag atccagacgg cggtgcgtct gttgcttccc ggggagttgg ccaagcacgc
      361 tgtgtccgag ggcaccaagg cggtcaccaa gtacaccagc tccaagtgag ttcctctaac
      421 tcactcctaa cccaaaggct cttttcagag ccacctacac tttcagtcaa aaagtctgtt
      481 gcacatgcgt cctcccatgt agtcaatttg gggtggtgga tgtggacatc tagtttttgc
      541 cgctcagcgt tttctttttg tggacccttc cctctccagg tactttacaa gcagctccta
      601 gtgtcattcc taagtcgaat gctattggga cagccaatca tgttttgggt tttcggttat
      661 tcctttggct ttattgtata cagggatatt tttatgaatg acaatttaac atctctttga
      721 cttaagtatg taaatatcaa cctggaatta a
//
