LOCUS       NM_001416314            4439 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus H2B clustered histone 18 (H2bc18), mRNA.
ACCESSION   NM_001416314 XM_039103796
VERSION     NM_001416314.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4439)
  AUTHORS   Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M,
            Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail
            S, Li P and Sutton G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
REFERENCE   2  (bases 1 to 4439)
  AUTHORS   Choi YC and Chae CB.
  TITLE     The genomic and sequence analysis of rat histone H2B genes
  JOURNAL   DNA Seq 9 (5-6), 353-358 (1998)
   PUBMED   10524764
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000076.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001416314.2.
            
            On Jan 26, 2023 this sequence version replaced XM_039103796.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: CB556698.1, CB725324.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4439              JACYVU010000076.1  2041385-2045823
FEATURES             Location/Qualifiers
     source          1..4439
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..4439
                     /gene="H2bc18"
                     /gene_synonym="Hist2h2bb; RGD1561543"
                     /note="H2B clustered histone 18"
                     /db_xref="GeneID:100912338"
                     /db_xref="RGD:6487821"
     exon            1..4439
                     /gene="H2bc18"
                     /gene_synonym="Hist2h2bb; RGD1561543"
                     /inference="alignment:Splign:2.1.0"
     CDS             53..433
                     /gene="H2bc18"
                     /gene_synonym="Hist2h2bb; RGD1561543"
                     /note="histone H2B type 2-F; histone H2B type 2-B-like;
                     histone cluster 2, H2bb; histone H2B-3"
                     /codon_start=1
                     /product="H2B clustered histone 18"
                     /protein_id="NP_001403243.1"
                     /db_xref="GeneID:100912338"
                     /db_xref="RGD:6487821"
                     /translation="MPDPAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYK
                     VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL
                     LPGELAKHAVSEGTKAVTKYTSSK"
ORIGIN      
        1 agtccgtagt tgcctcgtcc atcttacggt gagtctctaa acgcggagga aaatgccgga
       61 tccagccaag tctgctcctg ctccaaagaa gggctcgaag aaagctgtca cgaaagtcca
      121 gaagaaagat ggcaagaagc gcaagcgcag ccgtaaggaa agctactctg tctacgtgta
      181 caaggtgctg aagcaagtgc acccggacac cggcatctca tctaaggcca tgggtatcat
      241 gaattccttc gtgaacgaca tcttcgagcg catcgcaggt gaggcctccc gtctggcgca
      301 ttacaacaag cgctcgacca tcacttcccg ggagatacag acggccgtgc gtctgctgct
      361 tcccggggag ttggctaaac atgctgtgtc ggagggcacc aaggctgtga ccaagtacac
      421 cagctccaag tgaggtgcag caaagacgtg attgatcggc tttacccaaa aggctctttt
      481 cagagccact ttagttctcg aagaaagggc tgtaatcact aagggcctgt atggtctagc
      541 aggtaaggtc tggtcgtgag tctaaccctg caacactgca atatcgagtg tttccaagtg
      601 taaggtgagg tggaggttgt ctcatcacgt atcagattga ggtgagatgt aaatttatgg
      661 ccggggaact atcttcccat tagactgttc aagcctactc caagttaatc ccggcatctc
      721 ctgtgattga ttccaagcag gggctagtgt ctcactgccc taggcaccca ggattgtact
      781 ctacctagat catatgggcc aactattgtc atcagacaga agtatcccaa gtgatactca
      841 atagggtcat cttcagaaac tcccgctcgc tgcccagctt caaccgcttt gagtgttcat
      901 aacacagact ctttttttta aacactgagt actaaagatg gtatacacag cgggaataag
      961 acttatcttg cacctttcac caagggctga gggctcttaa cttttctgat tctcttccag
     1021 taagaaaata gtggagctgt ttctaggttg gttagggtta gatgagataa tggtaccagc
     1081 tgtaacaagc agttgccagg gcatagtggg gtaggaagca gtgcagccac cactgtgcct
     1141 cctgcacact tccaacaagt gtgcgtacag atttaattct cttaagtgtc ttgcgtttac
     1201 ctccttactg cataaggcat gtttctggag agaccttgag atctgtgggt tgtcattatg
     1261 tagaaactaa gtatcttctg atcccctaag gagatagtgg gctttaatac ttgatgactg
     1321 gtgtttttaa tcccagcact ctaggaagca gattcttgat atttgccaca cttggtaata
     1381 gtttacagcc aaagatagcc cagcactctg gggaggcagg caattggact tctgagttca
     1441 agataagcct gatccacaga gatagttcca ggataaccag ggctatgtcc taaccaagac
     1501 aacacaagaa atcttgtctc aaacaattct catcaaaaag tactagtaaa ctctcctcag
     1561 cttctaattg acatttctga attttgatga tttaacacaa aagggaacca agcaaaaaga
     1621 aactacctat aatttatctc tgctatttgt gatactgtat tttatctgat ttggcctgtt
     1681 caggactcct ggagaataat aaacaggaaa gggtgcggtg aataacgggc taatacatag
     1741 gcgccttggg gttacatcat ccaggggcac ctcttctcct aaggtgtcta ctctatgaga
     1801 caaatccaaa gggtttgcct gtcaattcct ttgttgggga ctccccctcc ccccaagtca
     1861 ttttaagaat ctaaacagcg acttatattt tcatattgat ttccagacat taggtggtag
     1921 aaatcgttct aaatgaccat tccttacccc catacttccg atgaaaaata aaaagatgtt
     1981 gatagaattt taggactggc aagatgcccc agtatgtaaa ggtatctttg cccaatgacc
     2041 tgagtttggt cctggggaca aacacaaaca caataagtaa atatgatttt tttttttttt
     2101 ttttttttta ggattaggag agttcacagt aaaatttgaa tcctaattat ttgcttacag
     2161 gaaaaagcac ccaccccctg tctggccaag tctatcttat ttgtaatggt cggatgtgta
     2221 tttaaagaaa aggagcatta ctgagggttc tggttcagtt ctgagaagag ccaggttggg
     2281 tagattataa acacaaagca aaacaaagaa acttcctagc agggagaaat ggtatttggc
     2341 tgagtctggt ggcacaagcc tttagtccaa gcacttgggg gacaaaggta agtggatctc
     2401 catgagttta aggccagcct ggtctacatt tggagctcta agtcagacaa ggctatatag
     2461 tgacactcta cctcaaaaca acccagaagt tgtatttggg attctaagcg ttgactgagt
     2521 ccacagggct aaggaccccc atacgagttg cagttatcaa gaaagctaca tcacagacca
     2581 tccctgacac tacagagaga tactgtacat atgagaggat aactcctaag gcctctgtgt
     2641 gggccagggt accgtgcata cactactgcg acaaaccagc cgtcctgtga ctttctcgga
     2701 ggtttcattt gctgtgcttc ttaataatgc acttcctcat cttaaaatcg ggaatactag
     2761 caatggtcac acaatcttca ggaagtgacc acgttgttat aaggattttg gaaagcatac
     2821 ctcacaagac taataactca tacctacact atattgtgtt caaaatgaaa agtttacatt
     2881 aaacattggt caaaactgac caccactttt taaagggccc actcactgat tacaaaataa
     2941 caaacacata ctctacaatt ttttttattt accaaaaagt acacaggtta aagttgattt
     3001 cagaacaaga cctgcttgtt cttcaggaat aaggggagca ggggtggtgt tcgaggagtc
     3061 tggttggttc ataggtttgg aatgaactta aaggccggtg tggcgcacac ctttagtcac
     3121 tgaacgggga ggaggcacag gctggcaaaa aaaaaaaaaa aaaaaaaaaa aaaaggattt
     3181 aagagaaagt tagaatgggt taaacttttt tttttctttt ctttttttcg gagctgggga
     3241 tcgaacccag ggccttgcgc ttgctaggca agcgctctac ctctgagcta aatccccaac
     3301 cctagaatgg gttaaacttt taacgaaaaa agaacaataa aaaacaaagg gaagtagaaa
     3361 gggcaaatct gagaatcagc aggatagcag acttccccag tctaccaaga ctgaattaac
     3421 caataaaaac aaagacttct ctgacaaatc ccctgtgagt tcaacactga aggagatgaa
     3481 gtgcatagcc aatgaggtta gatgcagaag atacttgtaa atgctgtgag cttggggctt
     3541 gggcttttgt tttgaattct gtgcacgagt gtcttgtctg tatctgcatg aatacctggt
     3601 accacggagt ttagaaaagg atgtcagaca ctctgggagt ggagttacag atggttgcga
     3661 tccatcatgt gattgctggg aactgaactc gggtcctctc taagagcagc aactgttctt
     3721 aatcaatgag ccctttgcct ggttcattgt tggtttggtt ttgactctgt gccttcctgg
     3781 tgggcaagac gaagaagggc aaactatttt attggctatg agctttggag caactgtgta
     3841 ctaaccagtc ctattatact ctcatgtctc ctgctaccca ggctggcctg agactcctta
     3901 agtattgagg atgaccttga attgccgatc ctcgtacctc cgcctcccta atgctggtgt
     3961 ggctctatgc ttggttttct gccgttcaga ggattaagca gagctgagga ctaacactga
     4021 gcaagcactg ggccggtgga actactcccc aaaccccaag ccttatggag tcccaagttg
     4081 tctacattcg tactagtgtt ggggccaatg gggaaggaga aagagactag acttctcatt
     4141 gccaacctta atatacaatt ttctgggagt tagtttatga gacatgacct ctaaagattc
     4201 tgccagtgcc acttcacaca aatgggagat gtaggaatgg tcctaacaag tctctttaga
     4261 aggaacgttc tagcactact gtaaaatatg aacaatgacg taagtaagca gagctacctt
     4321 agcatgggta ggaaagtcgg catcatgtct gtccgtcctc ccttgactgc ccctccccca
     4381 aacacagatc tgtaggttta ctgaagtcct tctccatatt aaatattaaa taatcaaaa
//
