LOCUS       NM_001109400             464 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus H2B clustered histone 12 (H2bc12), mRNA.
ACCESSION   NM_001109400 XM_001056594
VERSION     NM_001109400.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Bonenfant,D., Coulot,M., Towbin,H., Schindler,P. and van Oostrum,J.
  TITLE     Characterization of histone H2A and H2B variants and their
            post-translational modifications by mass spectrometry
  JOURNAL   Mol Cell Proteomics 5 (3), 541-552 (2006)
   PUBMED   16319397
REFERENCE   3  (bases 1 to 464)
  AUTHORS   Howell,S.J., Wilk,D., Yadav,S.P. and Bevins,C.L.
  TITLE     Antimicrobial polypeptides of the human colonic epithelium
  JOURNAL   Peptides 24 (11), 1763-1770 (2003)
   PUBMED   15019208
REFERENCE   4  (bases 1 to 464)
  AUTHORS   Tollin,M., Bergman,P., Svenberg,T., Jornvall,H., Gudmundsson,G.H.
            and Agerberth,B.
  TITLE     Antimicrobial peptides in the first line defence of human colon
            mucosa
  JOURNAL   Peptides 24 (4), 523-530 (2003)
   PUBMED   12860195
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Nov 4, 2022 this sequence version replaced NM_001109400.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AA997499.1, SRR26360194.661393.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-464               JAXUCZ010000017.1  47181477-47181940   c
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..464
                     /gene="H2bc12"
                     /gene_synonym="Hist1h2bc; Hist1h2bk"
                     /note="H2B clustered histone 12"
                     /db_xref="GeneID:680312"
                     /db_xref="RGD:1593016"
     exon            1..464
                     /gene="H2bc12"
                     /gene_synonym="Hist1h2bc; Hist1h2bk"
                     /inference="alignment:Splign:2.1.0"
     CDS             37..417
                     /gene="H2bc12"
                     /gene_synonym="Hist1h2bc; Hist1h2bk"
                     /note="histone cluster 1, H2bc; histone cluster 1, H2bk;
                     histone cluster 1 H2B family member k"
                     /codon_start=1
                     /product="histone H2B"
                     /protein_id="NP_001102870.1"
                     /db_xref="GeneID:680312"
                     /db_xref="RGD:1593016"
                     /translation="MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYK
                     VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL
                     LPGELAKHAVSEGTKAVTKYTSAK"
ORIGIN      
        1 ggttttcttg ttcggtgttc tgtctacttc tacagtatgc ctgaacctgc caagtccgcc
       61 cccgcaccga agaagggctc caagaaggcc gtgaccaagg cgcagaagaa ggacggcaag
      121 aagcgcaagc gcagccgtaa ggagagctac tcggtgtacg tgtacaaggt gctgaagcaa
      181 gtacacccgg acacgggcat ctcttccaag gccatgggca tcatgaactc gttcgtgaac
      241 gacatctttg agcgcatcgc gggcgaggcg tcgcgcctgg cgcactacaa caagcgctcg
      301 accatcacgt cccgggagat ccagacggcc gtgcgcctgt tgcttcctgg ggagctggcc
      361 aagcacgcgg tgtccgaggg caccaaggcc gtcaccaaat acaccagcgc taagtaaact
      421 tttcagcagg gttaacacca aaggctcttt taagagccac taaa
//
