LOCUS       NM_001408920             580 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus H2A.L variant histone 3 (H2al3), mRNA.
ACCESSION   NM_001408920 XM_002730197
VERSION     NM_001408920.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Govin,J., Escoffier,E., Rousseaux,S., Kuhn,L., Ferro,M.,
            Thevenon,J., Catena,R., Davidson,I., Garin,J., Khochbin,S. and
            Caron,C.
  TITLE     Pericentric heterochromatin reprogramming by new histone variants
            during mouse spermiogenesis
  JOURNAL   J Cell Biol 176 (3), 283-294 (2007)
   PUBMED   17261847
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Jul 1, 2022 this sequence version replaced XM_002730197.5.
            
            ##Evidence-Data-START##
            Transcript is intronless :: FM089335.1, BF404274.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-580               JAXUCZ010000021.1  15577826-15578405   c
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq12"
     gene            1..580
                     /gene="H2al3"
                     /note="H2A.L variant histone 3"
                     /db_xref="GeneID:100363125"
                     /db_xref="RGD:2324764"
     exon            1..580
                     /gene="H2al3"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..467
                     /gene="H2al3"
                     /note="histone H2A-Bbd type 1; rCG42854-like"
                     /codon_start=1
                     /product="uncharacterized protein LOC100363125"
                     /protein_id="NP_001395849.1"
                     /db_xref="GeneID:100363125"
                     /db_xref="RGD:2324764"
                     /translation="MEGKRQNNAARSSRGKLHFPVNKVERLLRERNTSKCPNSSAPVF
                     LAGVLEYLTSNILDLAGKEAHNSGSKLISPEHVTMAIRKNEGFHQLLKDNKWLAGEIP
                     GPSGTSALNKRSALKRPTPDEITEPDETPAPSGTPAPDKK"
ORIGIN      
        1 gagagagagc cgaccacaca ccatctcaac caggtactat ggaaggcaag cgacagaata
       61 atgcggctcg ctcctcacga ggaaaacttc acttcccagt taacaaagta gaacgcctac
      121 ttcgagaaag gaacacctcc aaatgcccta actcctctgc acccgttttt cttgccggtg
      181 ttcttgaata tttgacctca aatattcttg acctggctgg caaggaggcc cacaacagtg
      241 gcagtaagct tattagccct gagcatgtga ccatggccat tcgaaagaat gaaggattcc
      301 accaactcct aaaagataac aaatggttgg ctggtgagat accaggaccc agcgggacat
      361 cagcacttaa taaaagatct gcactcaaga gaccaacacc tgatgagata acagaacctg
      421 atgagacacc agcaccctct gggacaccag cacctgataa gaagtgaaga taattgcatt
      481 tcagagactg gaaagccatc aagtctcaaa tcagcctcaa tgtctccctt attggtggag
      541 gtggggctta ctcagacatt gtattaaagt gtctaaagca
//
