LOCUS       NM_001109423             504 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus H2A clustered histone 4 (H2ac4), mRNA.
ACCESSION   NM_001109423 XM_001058007
VERSION     NM_001109423.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Singh,R., Mortazavi,A., Telu,K.H., Nagarajan,P., Lucas,D.M.,
            Thomas-Ahner,J.M., Clinton,S.K., Byrd,J.C., Freitas,M.A. and
            Parthun,M.R.
  TITLE     Increasing the complexity of chromatin: functionally distinct roles
            for replication-dependent histone H2A isoforms in cell
            proliferation and carcinogenesis
  JOURNAL   Nucleic Acids Res 41 (20), 9284-9295 (2013)
   PUBMED   23956221
REFERENCE   2  (bases 1 to 504)
  AUTHORS   Bonenfant,D., Coulot,M., Towbin,H., Schindler,P. and van Oostrum,J.
  TITLE     Characterization of histone H2A and H2B variants and their
            post-translational modifications by mass spectrometry
  JOURNAL   Mol Cell Proteomics 5 (3), 541-552 (2006)
   PUBMED   16319397
REFERENCE   3  (bases 1 to 504)
  AUTHORS   Boyne,M.T. 2nd, Pesavento,J.J., Mizzen,C.A. and Kelleher,N.L.
  TITLE     Precise characterization of human histones in the H2A gene family
            by top down mass spectrometry
  JOURNAL   J Proteome Res 5 (2), 248-253 (2006)
   PUBMED   16457589
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Oct 25, 2022 this sequence version replaced NM_001109423.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-504               JAXUCZ010000017.1  47495624-47496127   c
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..504
                     /gene="H2ac4"
                     /gene_synonym="Hist1h2ak"
                     /note="H2A clustered histone 4"
                     /db_xref="GeneID:680615"
                     /db_xref="RGD:1589461"
     exon            1..504
                     /gene="H2ac4"
                     /gene_synonym="Hist1h2ak"
                     /inference="alignment:Splign:2.1.0"
     CDS             43..435
                     /gene="H2ac4"
                     /gene_synonym="Hist1h2ak"
                     /note="histone cluster 1, H2ak"
                     /codon_start=1
                     /product="H2A clustered histone 4"
                     /protein_id="NP_001102893.1"
                     /db_xref="GeneID:680615"
                     /db_xref="RGD:1589461"
                     /translation="MTGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERV
                     GAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVT
                     IAQGGVLPNIQAVLLPKKTESHHKAKGK"
ORIGIN      
        1 actgagtatc cttcagtgga ttctaccttc cagctctcta caatgactgg acgtggtaaa
       61 caaggtggta aggctcgtgc caaggccaag acccgctcct cccgggccgg cctacagttc
      121 cccgtgggtc gtgtgcaccg tctgctccgc aagggcaact actcggaacg ggtgggcgcc
      181 ggcgccccgg tgtacctggc ggccgtgctg gagtacctga cggccgagat cttggagctg
      241 gcgggcaacg cggcgaggga caacaagaag acgcgtatca tcccgcgcca cctgcagctg
      301 gccatccgca acgacgagga gctcaacaag ctgctgggcc gcgtgaccat cgcacagggc
      361 ggtgtcctgc ccaacatcca ggcggtgctg ctgcccaaga agaccgagag ccaccacaaa
      421 gctaagggaa agtgagaccc tttatacaaa gcactatcac caaaggctct tttcagagcc
      481 actcactttc tccaaaaaga attg
//
