LOCUS       NM_001408842             479 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus H2A clustered histone 20 (H2ac20), mRNA.
ACCESSION   NM_001408842 XM_574997
VERSION     NM_001408842.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 479)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   2  (bases 1 to 479)
  AUTHORS   Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J., Wauben,M.
            and Stoorvogel,W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   3  (bases 1 to 479)
  AUTHORS   Bonenfant,D., Coulot,M., Towbin,H., Schindler,P. and van Oostrum,J.
  TITLE     Characterization of histone H2A and H2B variants and their
            post-translational modifications by mass spectrometry
  JOURNAL   Mol Cell Proteomics 5 (3), 541-552 (2006)
   PUBMED   16319397
REFERENCE   4  (bases 1 to 479)
  AUTHORS   Boyne,M.T. 2nd, Pesavento,J.J., Mizzen,C.A. and Kelleher,N.L.
  TITLE     Precise characterization of human histones in the H2A gene family
            by top down mass spectrometry
  JOURNAL   J Proteome Res 5 (2), 248-253 (2006)
   PUBMED   16457589
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jun 28, 2022 this sequence version replaced XM_574997.8.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360181.2682407.1,
                                        SRR22582419.1552339.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-479               JAXUCZ010000002.1  186468748-186469226 c
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..479
                     /gene="H2ac20"
                     /gene_synonym="Hist2h2ac; RGD1560965"
                     /note="H2A clustered histone 20"
                     /db_xref="GeneID:499675"
                     /db_xref="RGD:1560965"
     exon            1..479
                     /gene="H2ac20"
                     /gene_synonym="Hist2h2ac; RGD1560965"
                     /inference="alignment:Splign:2.1.0"
     CDS             49..438
                     /gene="H2ac20"
                     /gene_synonym="Hist2h2ac; RGD1560965"
                     /note="histone cluster 2, H2ac; histone H2A type 2-C;
                     histone cluster 2 H2A family member c"
                     /codon_start=1
                     /product="H2A clustered histone 20"
                     /protein_id="NP_001395771.1"
                     /db_xref="GeneID:499675"
                     /db_xref="RGD:1560965"
                     /translation="MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERV
                     GAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVT
                     IAQGGVLPNIQAVLLPKKTESHKAKSK"
ORIGIN      
        1 gcttcatcag agttgtcact tcagctagtc ttactctaca tcttagttat gtctggccgc
       61 ggcaagcaag gaggcaaggc ccgcgccaag gccaagtcgc ggtcgtcccg cgccgggctg
      121 cagttcccag tgggtcgcgt gcaccggctg ctgcgcaagg gcaactacgc ggagcgcgtg
      181 ggcgccggcg cgccggtata catggcagcg gtgctggagt acctgaccgc cgagatcctg
      241 gagctggcgg gcaacgcggc ccgcgacaac aagaagaccc gcatcatccc gcgccacctg
      301 cagctggcca tccgcaacga cgaagaactc aacaagctgc tgggcaaagt gacgatcgcg
      361 cagggcggcg tcctgcccaa catccaggcc gtgctgctgc ccaagaagac tgagagccac
      421 aaggctaaga gcaagtgaaa ctcactaatc caaaaaaggc tctttttaga gccaccaaa
//
