LOCUS       NM_001109351            1149 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus H1.8 linker histone (H1f8), mRNA.
ACCESSION   NM_001109351 XM_001054350 XM_578376
VERSION     NM_001109351.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Hayakawa K, Ohgane J, Tanaka S, Yagi S and Shiota K.
  TITLE     Oocyte-specific linker histone H1foo is an epigenomic modulator
            that decondenses chromatin and impairs pluripotency
  JOURNAL   Epigenetics 7 (9), 1029-1036 (2012)
   PUBMED   22868987
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta
            R, Wang NS and Knepper MA.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   3  (bases 1 to 1149)
  AUTHORS   Tanaka M, Hennebold JD, Macfarlane J and Adashi EY.
  TITLE     A mammalian oocyte-specific linker histone gene H1oo: homology with
            the genes for the oocyte-specific cleavage stage histone (cs-H1) of
            sea urchin and the B4/H1M histone of the frog
  JOURNAL   Development 128 (5), 655-664 (2001)
   PUBMED   11171391
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473964.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_578376.1, XM_001054350.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..1149
                     /gene="H1f8"
                     /gene_synonym="H1foo; RGD1566236"
                     /note="H1.8 linker histone"
                     /db_xref="GeneID:502875"
                     /db_xref="RGD:1566236"
     exon            1..141
                     /gene="H1f8"
                     /gene_synonym="H1foo; RGD1566236"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..1037
                     /gene="H1f8"
                     /gene_synonym="H1foo; RGD1566236"
                     /note="H1 histone family, member O, oocyte-specific"
                     /codon_start=1
                     /product="H1.8 linker histone"
                     /protein_id="NP_001102821.1"
                     /db_xref="GeneID:502875"
                     /db_xref="RGD:1566236"
                     /translation="MAPGSVSSVSSSSSVPSSDTSPPGSCGLPGAVSPDPSCSRIQVG
                     QRNPTMLRMVLEALKAREKRQGTSVVAIKVYIQHKYPTVGTTRFKYLLKQALETGMRR
                     GLLTRPANSKAKGATGSFKLVPKPKKKRTCAPKARGGATGTKETGSKESGLRKKDQVG
                     KAKTEKAAPNPGRKRKAYPCSAATLEKAPKNAKAVPREVREAPLKRDKAAGAPLTANI
                     GQKVKHSGTGQEADAHGKTKDVCEKSKASASKVQNSVASLIKKEMAAIAHMETVVQGA
                     KTVQKTKAPTPSQDVRHKAQPTTRVRKTKTPEDTKRPQLPPKTSSKAPSKKAEASS"
     exon            142..401
                     /gene="H1f8"
                     /gene_synonym="H1foo; RGD1566236"
                     /inference="alignment:Splign:2.1.0"
     exon            402..726
                     /gene="H1f8"
                     /gene_synonym="H1foo; RGD1566236"
                     /inference="alignment:Splign:2.1.0"
     exon            727..788
                     /gene="H1f8"
                     /gene_synonym="H1foo; RGD1566236"
                     /inference="alignment:Splign:2.1.0"
     exon            789..1149
                     /gene="H1f8"
                     /gene_synonym="H1foo; RGD1566236"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgacagagc tctggcctgg cctgccgctg cctgtgccat ggctccaggg agtgtctcca
       61 gtgtttcttc ctcctcctct gttccctcca gcgacacatc acctcctgga tcatgtgggc
      121 tccctggggc tgtcagtcca gatccaagtt gcagcaggat ccaagtaggc cagcggaacc
      181 cgacaatgct gcgtatggta ctagaggctc tgaaggccag ggagaagcgc cagggcacct
      241 cagttgtagc catcaaggtc tatatccagc ataagtaccc cacagtgggc accacccgct
      301 tcaagtacct gctgaagcag gccctggaaa ctggcatgcg gcgaggcctc ctcaccaggc
      361 ctgccaactc caaggccaag ggtgccactg gcagcttcaa gctagttccc aagcccaaga
      421 aaaagagaac ctgtgccccg aaagcccgtg ggggagctac aggtaccaag gagacaggct
      481 ccaaggaatc cggattgcgg aagaaagacc aagttggcaa ggccaagacg gagaaagcgg
      541 ctccaaaccc agggcggaag cggaaggctt atccctgttc agcagccacg ttggagaagg
      601 cgcctaagaa tgccaaggcg gtgccaagag aggtccgaga ggccccccta aaacgagaca
      661 aagctgcagg ggcccctctc actgccaaca taggccagaa ggtcaaacac agtgggaccg
      721 ggcaagaagc agatgcccat gggaagacca aagatgtgtg tgagaaatca aaggcctcgg
      781 ctagcaaggt ccagaatagt gttgcttccc tcatcaaaaa ggagatggca gccatagccc
      841 acatggagac agttgttcag ggggctaaga cggtgcagaa gaccaaagcg cccactcctt
      901 cccaggacgt cagacacaag gcacagccca caactagggt caggaagaca aagacccccg
      961 aggacaccaa aaggcctcag ttacccccca agacctcatc caaggctccc agcaagaagg
     1021 ctgaggctag tagctagggc cagggttggg gagatggcac tccgaagctt ttattctcta
     1081 acaaactgtc ataatgtcta atcataattt atttatcaat aaagacttct ctttgtattc
     1141 acacgctgg
//
