LOCUS       NM_001024356            1395 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus H1.7 linker histone (H1f7), mRNA.
ACCESSION   NM_001024356 XM_576337
VERSION     NM_001024356.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Shalini,V., Bhaduri,U., Ravikkumar,A.C., Rengarajan,A. and
            Satyanarayana,R.M.R.
  TITLE     Genome-wide occupancy reveals the localization of H1T2 (H1fnt) to
            repeat regions and a subset of transcriptionally active chromatin
            domains in rat spermatids
  JOURNAL   Epigenetics Chromatin 14 (1), 3 (2021)
   PUBMED   33407810
  REMARK    GeneRIF: Genome-wide occupancy reveals the localization of H1T2
            (H1fnt) to repeat regions and a subset of transcriptionally active
            chromatin domains in rat spermatids.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1395)
  AUTHORS   Tang,M.C., Jacobs,S.A., Mattiske,D.M., Soh,Y.M., Graham,A.N.,
            Tran,A., Lim,S.L., Hudson,D.F., Kalitsis,P., O'Bryan,M.K.,
            Wong,L.H. and Mann,J.R.
  TITLE     Contribution of the two genes encoding histone variant h3.3 to
            viability and fertility in mice
  JOURNAL   PLoS Genet 11 (2), e1004964 (2015)
   PUBMED   25675407
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1395)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   4  (bases 1 to 1395)
  AUTHORS   Govin,J., Escoffier,E., Rousseaux,S., Kuhn,L., Ferro,M.,
            Thevenon,J., Catena,R., Davidson,I., Garin,J., Khochbin,S. and
            Caron,C.
  TITLE     Pericentric heterochromatin reprogramming by new histone variants
            during mouse spermiogenesis
  JOURNAL   J Cell Biol 176 (3), 283-294 (2007)
   PUBMED   17261847
REFERENCE   5  (bases 1 to 1395)
  AUTHORS   Catena,R., Ronfani,L., Sassone-Corsi,P. and Davidson,I.
  TITLE     Changes in intranuclear chromatin architecture induce bipolar
            nuclear localization of histone variant H1T2 in male haploid
            spermatids
  JOURNAL   Dev Biol 296 (1), 231-238 (2006)
   PUBMED   16765935
REFERENCE   6  (bases 1 to 1395)
  AUTHORS   Martianov,I., Brancorsini,S., Catena,R., Gansmuller,A., Kotaja,N.,
            Parvinen,M., Sassone-Corsi,P. and Davidson,I.
  TITLE     Polar nuclear localization of H1T2, a histone H1 variant, required
            for spermatid elongation and DNA condensation during spermiogenesis
  JOURNAL   Proc Natl Acad Sci U S A 102 (8), 2808-2813 (2005)
   PUBMED   15710904
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085950.1.
            
            On May 27, 2005 this sequence version replaced XM_576337.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC085950.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..1395
                     /gene="H1f7"
                     /gene_synonym="H1-7; H1fnt"
                     /note="H1.7 linker histone"
                     /db_xref="GeneID:500928"
                     /db_xref="RGD:1560024"
     exon            1..1368
                     /gene="H1f7"
                     /gene_synonym="H1-7; H1fnt"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..1282
                     /gene="H1f7"
                     /gene_synonym="H1-7; H1fnt"
                     /note="histone H1t2; haploid germ cell-specific nuclear
                     protein 1; H1 histone family, member N, testis-specific;
                     histone H1.7"
                     /codon_start=1
                     /product="testis-specific H1 histone"
                     /protein_id="NP_001019527.1"
                     /db_xref="GeneID:500928"
                     /db_xref="RGD:1560024"
                     /translation="MAEAAQPTGESQGAELTIQIQQPVERALRTPVRRGAQSVLRVSQ
                     LLLRAIAGHQRLTLAALKKELGNAGYEVRRKISSHQAGDSTRSEKYTLLRVSGSDAAG
                     YFRVWKISKPRRKAPRSRLTLGSHSHGKTVLKSPRPLRPRSRRKAAKKAREVWRRKAR
                     ALKARSRRARSLARSMVRSRASSRASSRARSRARSRARSRARSRARSRASSRARSSAR
                     SSARSSARSSVRSSVRSSARSSARSSIRSRARSRARTRARSRAKDLVRSKAREQARTR
                     AREQAHARARTHDCVRAKAQEYVRAKEQQYVSAKEQEYVRTKEQECAKAREQMRIGAM
                     EEARIKAIDNRVQTTMEDTSPWSTDEMRSRTKPREEKRQEPERPVKQTNQKPAVVKVD
                     NAPSRQGKTCTKSSTKSGHPGCSGTS"
ORIGIN      
        1 cccgcggctg gggggaagcg gggccatggc tgaggccgcc cagcccactg gggaatccca
       61 aggcgcagaa cttactatcc agatccagca gcctgtggag agagccctga ggacgccggt
      121 caggcggggt gcacagtccg tgctcagagt gtcccagctg ctgctcaggg ccattgctgg
      181 ccaccagcgc ctgactctgg ctgcactcaa gaaggagctg ggaaacgccg gctacgaagt
      241 gcgcaggaag atctcctctc accaagcggg ggactccacc aggtcggaga aatacacgct
      301 cctgagggtc agtggcagcg acgctgcagg ctacttcagg gtctggaaaa tttcaaagcc
      361 taggagaaag gcgccacggt cccggttgac actgggcagc cactctcacg ggaagactgt
      421 gctcaaatcc ccaagaccac tcaggccccg ctcgcgtcgc aaggcggcca agaaggccag
      481 agaagtctgg agacgcaagg ccagggcttt gaaggcaagg tccaggaggg ccagatcact
      541 ggccagatca atggtcagat caagggccag ctcaagggcc agctcaaggg ccaggtcaag
      601 ggccaggtca agagcccggt caagggccag gtcaagggct aggtcaagag ccagctcaag
      661 ggcccggtca agcgcccggt caagcgcccg gtcaagtgcc cggtcaagcg tgcggtcaag
      721 cgtgcggtca agcgcccggt caagcgcccg gtcaagcatc aggtcaagag ccaggtcaag
      781 ggcaaggaca agggccaggt ctagagctaa ggacctagtg cgttccaagg ccagggaaca
      841 ggctcgtacc agagccaggg aacaagctca tgccagagcc aggacacacg actgtgtcag
      901 ggccaaggca caggagtatg tcagggccaa agagcagcag tacgtcagtg ccaaggagca
      961 ggagtatgtc aggaccaagg agcaggagtg tgccaaggcc agggaacaga tgcgtatcgg
     1021 agccatggag gaagccagga tcaaggcgat cgacaacaga gtacagacta ccatggaaga
     1081 taccagtcct tggtctacag atgagatgag gtcaagaacc aaacctaggg aagagaagag
     1141 acaggaaccc gagaggccag taaaacaaac caaccagaag ccagctgtgg tcaaagtaga
     1201 caacgctccc agcagacaag gaaaaacatg cacaaagtct tctactaaaa gtggtcatcc
     1261 tgggtgctca gggacttctt aacgccaggg atgttcctct gggcactgtt gccttttcag
     1321 atgggctcca aggagatcga ctctctttca ttgaagcaat ttacaagaaa aaaaaaaaaa
     1381 aaaaaaaaaa aaaaa
//
