LOCUS       NM_001399079            1064 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus H1.10 linker histone (H1f10), mRNA.
ACCESSION   NM_001399079 XM_575600
VERSION     NM_001399079.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Jan 4, 2022 this sequence version replaced XM_575600.8.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: DV213396.1, SRR22582416.895658.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1064              JAXUCZ010000004.1  121997834-121998897 c
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..1064
                     /gene="H1f10"
                     /gene_synonym="H1fx; RGD1565596"
                     /note="H1.10 linker histone"
                     /db_xref="GeneID:500252"
                     /db_xref="RGD:1565596"
     exon            1..1064
                     /gene="H1f10"
                     /gene_synonym="H1fx; RGD1565596"
                     /inference="alignment:Splign:2.1.0"
     CDS             131..709
                     /gene="H1f10"
                     /gene_synonym="H1fx; RGD1565596"
                     /note="histone H1x; H1 histone family, member X; histone
                     H1.10"
                     /codon_start=1
                     /product="H1.10 linker histone"
                     /protein_id="NP_001386008.1"
                     /db_xref="GeneID:500252"
                     /db_xref="RGD:1565596"
                     /translation="MSVELEEALPPTSADGTARKTAKASGSAAPTQPKRRKNRKKNQP
                     GKYSQLVVETIRKLGERGGSSLARIYAEARKVAWFDQQNGRTYLKYSIRALVQNDTLL
                     QVKGTGANGSFKLNRKKLEGSAEKRGASAASSPAPKARTAAAAAADRTPARPQPERRA
                     QKSKKAAAAAASTKKVKKAAKPSVPKVPKGRK"
ORIGIN      
        1 cggccgctcc cgcctggagc cgccgcgcgc ccccagtcca ccggcggtgc cgccgcggcc
       61 cctcgccttc ctcttcccgg cgcggcctcc cggctaccgc gcgccgcctg ctaccaaccc
      121 actggccacc atgtcggtgg agcttgagga ggccctgccg ccgacgagcg ccgacgggac
      181 ggcccgcaag acggccaagg ccagcggctc tgcggcgccc acgcagccca agagaaggaa
      241 gaaccgcaaa aagaaccagc caggcaagta cagccagctg gtggtggaga cgatccgtaa
      301 gctgggtgag cgcggtggct cgtctctggc gcgcatctac gccgaggcca ggaaggtggc
      361 atggttcgac cagcagaacg ggcgcaccta cctcaagtac tctatccggg cgctggtgca
      421 gaacgacacg ctgctgcagg tgaagggcac cggcgccaac ggatccttca agctgaaccg
      481 caagaagctg gagggcagcg cggagaagcg cggagcttcg gcggccagta gccccgcgcc
      541 caaggcgcgc acggcggcgg cggcggcggc ggacagaacg ccagccaggc cgcagcccga
      601 gcggcgcgcg caaaagagca agaaggcggc ggcagctgct gccagcacga agaaggtgaa
      661 gaaggcggcc aaacccagcg tgcccaaggt gcccaagggc cgcaagtgac gcccctacag
      721 tctggcgaca ttttggagtt ttccgtcgtc tatctgccct ccccctggtg taccggttcc
      781 gtagggttcc gcctggccca ggtccctgat ccctgtcccc tccccgcccc tcccccagcg
      841 atgctgcgtt ctgtttgctt taggtttttg aaacggccct ggcgacgcct ccattggctc
      901 tcacccttgg caacggccgt cgtcatggtt accggcccgg cggcgccaat ggcctggcgg
      961 cgcctgccta ccgtgcccgc cgatggccac cccgcgcttg ggttgcgcgg cgccttggtc
     1021 cgcccgccgc cttcctgggg cgcaataaac ggttccaacc ttga
//
