LOCUS       NM_001106113             744 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus H1.1 linker histone, cluster member (H1f1), mRNA.
ACCESSION   NM_001106113 XM_001071190 XM_225330
VERSION     NM_001106113.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Polanska,E., Pospisilova,S. and Stros,M.
  TITLE     Binding of histone H1 to DNA is differentially modulated by redox
            state of HMGB1
  JOURNAL   PLoS One 9 (2), e89070 (2014)
   PUBMED   24551219
  REMARK    GeneRIF: Binding of histone H1 to DNA is differentially modulated
            by redox state of HMGB1.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Ninios,Y.P., Sekeri-Pataryas,K.E. and Sourlingas,T.G.
  TITLE     Histone H1 subtype preferences of DFF40 and possible nuclear
            localization of DFF40/45 in normal and trichostatin A-treated NB4
            leukemic cells
  JOURNAL   Apoptosis 15 (2), 128-138 (2010)
   PUBMED   19882353
REFERENCE   3  (bases 1 to 744)
  AUTHORS   Th'ng,J.P., Sung,R., Ye,M. and Hendzel,M.J.
  TITLE     H1 family histones in the nucleus. Control of binding and
            localization by the C-terminal domain
  JOURNAL   J Biol Chem 280 (30), 27809-27814 (2005)
   PUBMED   15911621
REFERENCE   4  (bases 1 to 744)
  AUTHORS   Roque,A., Orrego,M., Ponte,I. and Suau,P.
  TITLE     The preferential binding of histone H1 to DNA scaffold-associated
            regions is determined by its C-terminal domain
  JOURNAL   Nucleic Acids Res 32 (20), 6111-6119 (2004)
   PUBMED   15562002
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 744)
  AUTHORS   Zhao,M., Sutherland,C., Wilson,D.P., Deng,J., Macdonald,J.A. and
            Walsh,M.P.
  TITLE     Identification of the linker histone H1 as a protein kinase
            Cepsilon-binding protein in vascular smooth muscle
  JOURNAL   Biochem Cell Biol 82 (5), 538-546 (2004)
   PUBMED   15499382
  REMARK    GeneRIF: Histone H1 is both an anchoring protein and a substrate
            for activated PKCepsilon
REFERENCE   6  (bases 1 to 744)
  AUTHORS   Nayernia,K., Meinhardt,A., Drabent,B., Adham,I.M., Muller,C.,
            Steckel,M., Sancken,U. and Engel,W.
  TITLE     Synergistic effects of germ cell expressed genes on male fertility
            in mice
  JOURNAL   Cytogenet Genome Res 103 (3-4), 314-320 (2003)
   PUBMED   15051954
REFERENCE   7  (bases 1 to 744)
  AUTHORS   Brix,K., Summa,W., Lottspeich,F. and Herzog,V.
  TITLE     Extracellularly occurring histone H1 mediates the binding of
            thyroglobulin to the cell surface of mouse macrophages
  JOURNAL   J Clin Invest 102 (2), 283-293 (1998)
   PUBMED   9664069
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474064.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_225330.3, XM_001071190.1.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..744
                     /gene="H1f1"
                     /gene_synonym="H1-1; Hist1h1a"
                     /note="H1.1 linker histone, cluster member"
                     /db_xref="GeneID:291145"
                     /db_xref="RGD:1305706"
     exon            1..744
                     /gene="H1f1"
                     /gene_synonym="H1-1; Hist1h1a"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..691
                     /gene="H1f1"
                     /gene_synonym="H1-1; Hist1h1a"
                     /note="histone 1, H1a; histone H1a; histone cluster 1,
                     H1a; histone cluster 1 H1 family member a"
                     /codon_start=1
                     /product="histone H1.1"
                     /protein_id="NP_001099583.1"
                     /db_xref="GeneID:291145"
                     /db_xref="RGD:1305706"
                     /translation="MSETAPVPQPASVAPEKPAATKKTRKPAKAAVPRKKPAGPSVSE
                     LIVQAVSSSKERSGVSLAALKKSLAAAGYDVEKNNSRIKLGLKSLVNKGTLVQTKGTG
                     AAGSFKLNKKAESKASTTKVTVKAKASGAAKKPKKTAGAAAKKTVKTPKKPKKPAVSK
                     KTSSKSPKKPKVVKAKKVAKSPAKAKAVKPKAAKVKVTKPKTPAKPKKAAPKKK"
ORIGIN      
        1 acttcttttc ttcgtcttgg catttgctgg tcactcctca gcaaccatgt cggagacagc
       61 gccagtccct cagcctgcgt ctgttgcccc tgagaaacct gccgctacaa agaaaaccag
      121 gaagcctgcg aaagctgctg tccctcgaaa gaagcccgcg ggaccttcag tgtctgagct
      181 catcgtgcag gcagtctcat cctccaagga gcgcagcggc gtgtccttgg ctgcgctcaa
      241 gaagtcgctg gcggcggcgg gctacgatgt ggagaagaac aacagccgca tcaaactcgg
      301 gctgaagagc ctggtgaata agggcaccct ggtgcagact aagggtaccg gcgctgctgg
      361 ctcctttaag ctgaacaaga aggcggagtc caaagccagc accaccaagg tgacagtgaa
      421 ggcgaaagca tccggggcag ctaagaaacc caagaagact gctggggctg cagcaaagaa
      481 gactgtcaag acaccgaaga agcccaagaa gcctgcagtt tcaaagaaga cttcttctaa
      541 gagcccaaag aagccgaagg tggtcaaggc caagaaggta gccaagagcc ctgccaaggc
      601 aaaggcagtg aagcctaagg ctgccaaggt gaaggtgaca aagccaaaga ctccagctaa
      661 gccgaagaag gcggcgccca agaaaaagtg aacagttgga ggcttcttcc agtaacccaa
      721 cggctctttt cagagccacc taca
//
