LOCUS       NM_012578               1861 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus H1.0 linker histone (H1f0), mRNA.
ACCESSION   NM_012578
VERSION     NM_012578.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Zhu,Q., Zheng,F., You,W., Kang,X., Chen,C., Pan,Z., Zhou,J. and
            Hu,W.
  TITLE     Expression of Histone H1 in Rats with Traumatic Brain Injury and
            the Effect of the NLRP3 Inflammasome Pathway
  JOURNAL   World Neurosurg 171, e286-e290 (2023)
   PUBMED   36509326
  REMARK    GeneRIF: Expression of Histone H1 in Rats with Traumatic Brain
            Injury and the Effect of the NLRP3 Inflammasome Pathway.
REFERENCE   2  (bases 1 to 1861)
  AUTHORS   Hayakawa,K., Ohgane,J., Tanaka,S., Yagi,S. and Shiota,K.
  TITLE     Oocyte-specific linker histone H1foo is an epigenomic modulator
            that decondenses chromatin and impairs pluripotency
  JOURNAL   Epigenetics 7 (9), 1029-1036 (2012)
   PUBMED   22868987
REFERENCE   3  (bases 1 to 1861)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   4  (bases 1 to 1861)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   5  (bases 1 to 1861)
  AUTHORS   Bronze-da-Rocha,E., Lin,C.M., Shimura,T. and Aladjem,M.I.
  TITLE     Interactions of MCP1 with components of the replication machinery
            in mammalian cells
  JOURNAL   Int J Biol Sci 7 (2), 193-208 (2011)
   PUBMED   21383955
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 1861)
  AUTHORS   Vila,R., Ponte,I., Collado,M., Arrondo,J.L. and Suau,P.
  TITLE     Induction of secondary structure in a COOH-terminal peptide of
            histone H1 by interaction with the DNA: an infrared spectroscopy
            study
  JOURNAL   J Biol Chem 276 (33), 30898-30903 (2001)
   PUBMED   11413144
REFERENCE   7  (bases 1 to 1861)
  AUTHORS   Clarke,H.J., Bustin,M. and Oblin,C.
  TITLE     Chromatin modifications during oogenesis in the mouse: removal of
            somatic subtypes of histone H1 from oocyte chromatin occurs
            post-natally through a post-transcriptional mechanism
  JOURNAL   J Cell Sci 110 (Pt 4), 477-487 (1997)
   PUBMED   9067599
REFERENCE   8  (bases 1 to 1861)
  AUTHORS   Walter,L., Klinga-Levan,K., Helou,K., Albig,W., Drabent,B.,
            Doenecke,D., Gunther,E. and Levan,G.
  TITLE     Chromosome mapping of rat histone genes H1fv, H1d, H1t, Th2a and
            Th2b
  JOURNAL   Cytogenet Cell Genet 75 (2-3), 136-139 (1996)
   PUBMED   9040779
REFERENCE   9  (bases 1 to 1861)
  AUTHORS   Martinez,P., Vidal,J.M., Monsalves,C., Perez,M., Pucket,C.,
            Ponte,I. and Suau,P.
  TITLE     Cloning and analysis of the coding region of the histone
            H1(0)-encoding gene from rat PC12 cells
  JOURNAL   Gene 166 (2), 313-316 (1995)
   PUBMED   8543182
REFERENCE   10 (bases 1 to 1861)
  AUTHORS   Castiglia,D., Gristina,R., Scaturro,M. and Di Liegro,I.
  TITLE     Cloning and analysis of cDNA for rat histone H1(0)
  JOURNAL   Nucleic Acids Res 21 (7), 1674 (1993)
   PUBMED   8479926
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Nov 27, 2020 this sequence version replaced NM_012578.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC061842.1, X72624.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1861              JAXUCZ010000007.1  112473280-112475140
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..1861
                     /gene="H1f0"
                     /gene_synonym="H1-0; H1fv"
                     /note="H1.0 linker histone"
                     /db_xref="GeneID:24437"
                     /db_xref="RGD:2777"
     exon            1..1861
                     /gene="H1f0"
                     /gene_synonym="H1-0; H1fv"
                     /inference="alignment:Splign:2.1.0"
     CDS             142..726
                     /gene="H1f0"
                     /gene_synonym="H1-0; H1fv"
                     /note="H1 histone family, member 0; histone H1'; histone
                     H1(0); Histone H1-0; histone H10"
                     /codon_start=1
                     /product="histone H1.0"
                     /protein_id="NP_036710.1"
                     /db_xref="GeneID:24437"
                     /db_xref="RGD:2777"
                     /translation="MTENSTSTPAAKPKRAKAAKKSTDHPKYSDMIVAAIQAEKNRAG
                     SSRQSIQKYIKSHYKVGENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKGDEPK
                     RSVAFKKTKKEVKKVATPKKAAKPKKAASKAPSKKPKATPVKKAKKKPAATPKKAKKP
                     KIVKVKPVKASKPKKAKPVKPKAKSSAKRASKKK"
ORIGIN      
        1 cttccgtgtc cccggcagcc acactttagt ctggcctgct agtggagcgg aagaacagat
       61 cgcgagtcag gttctgcaca gcctccggcg aaggctggcc ctttggaagg ctccttgaac
      121 agccggagca ggccggccac catgaccgag aactccacct ccaccccggc ggcgaagccc
      181 aagcgggcca aggccgccaa gaagtccacg gaccacccca agtattcaga catgatcgtg
      241 gctgccatcc aggcagagaa gaaccgcgcc ggctcctcgc gccagtccat ccaaaagtat
      301 atcaagagcc actacaaggt gggtgagaac gccgactccc agatcaagtt gtccatcaag
      361 cgcctagtga ccaccggtgt tctcaagcaa accaaagggg tgggcgcctc ggggtccttc
      421 aggctggcca agggcgatga gcccaagagg tcggtggctt tcaagaagac caagaaggaa
      481 gtcaagaaag tggccactcc aaagaaggca gccaagccca agaaggctgc ttccaaagcc
      541 ccaagcaaga aacccaaagc caccccggtc aagaaggcca agaagaagcc ggctgccacg
      601 cccaagaaag ccaaaaagcc caagattgtc aaagtcaagc cagtcaaggc atccaaaccc
      661 aagaaggcca aacccgtgaa gcccaaagcc aagtcgagtg ccaagagagc cagcaagaag
      721 aaatgacaat gaaggctttg cttggggaca ctccttcctc cctcctgttt tctgtaaata
      781 catttctctc ttgatcccat ctgcaaccct ttgcccattc tatttggact ctatagagga
      841 cagagtttgg cttcctcaga cagactttgt ggaatatttt ccttaaccca ttgttcaagg
      901 acagcaaaca gacctcatct ttataatgat ggagatgtac ttttttcttg atttgatatt
      961 aaccttacgg ggttgtgggg ggggggggcg ttgtgtgttt ccttcggtgg tttgtttact
     1021 atgaaggtaa atggaactgg caaagttctg ggtaggtgag gacccaggaa ctaggttgct
     1081 tgtccctagt gagcgtttca gaacctttga tgagcaggtg ataccccatc tacctggcca
     1141 aggggggttg tgggggagaa gaggataaac tccctgggct gccctaccaa tggtggtaag
     1201 ttgggggacc tgatttcttt ttctcttctg ccctagtgcc tctccaagtg acagctggtt
     1261 agagaagcca tagcttctca caaccgggat ttagccattg ggaaggaagg gtcttctcag
     1321 cagtctctgg ttaaatggga gtggacttag ggggaggggt gcagagtcag ccaagtgcct
     1381 cagtgtgcct atggaaactt gggtttttcc acacggttga tggattgtgt cctaggagga
     1441 cgttgttcgt ttcctttccc ctcttcctgt gtaagatgtg gcattgcttg gtgccacttc
     1501 agttctacca gctgccactt aaaacccctc caagcttttg agtcttttct aagtagccga
     1561 ggagggggag aggcagggag tggactgtgg gatatactcc cgtggattcg aatttgctag
     1621 gtagctttag agaagcggga ttgtgtgcat gtgtgtatat gtatatatcc atatctaaga
     1681 ctagtactta gtctcacctc gggagctggg agaaaaactc tgtacagttg tcctcttatt
     1741 ttaataaagt aggaaactcg ggtaccctac cccacttttt aaacaagtgt aactagtgcc
     1801 gggaaaaaat tactgtggtt gtaattttaa aactttaaaa taaaactgga aaggaaaaaa
     1861 a
//
