LOCUS       XM_039094069            1400 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Granszyme B-like 1 (Gzmbl1), mRNA.
ACCESSION   XM_039094069
VERSION     XM_039094069.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094069.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1400
                     /gene="Gzmbl1"
                     /note="Granszyme B-like 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 81% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:502004"
                     /db_xref="RGD:1561819"
     CDS             1..834
                     /gene="Gzmbl1"
                     /codon_start=1
                     /product="granzyme B-like"
                     /protein_id="XP_038949997.1"
                     /db_xref="GeneID:502004"
                     /db_xref="RGD:1561819"
                     /translation="MALPKLYIEVKSEQGQHSRRWDLSGLPGKMKLLLLLLTFSLAPR
                     TQAGEIIGGHEANPNSRPYMAYLQIMDKDSGNKTCGGFLIRKDFVLTAAHCLGSKIIV
                     TLGAHNIKEQEKKQQVIPVVKIIPHPAYNAKTISNDIMLLKLKSKAKRTSAVKTLNLP
                     RSNFKVKPGDVCYVAGWGKLGPMGEFPDTLQEVELTVQEDQKCESHLTNVYDKANEIC
                     AGDPNIKRASFQGDSGGPLVCKKVAAGIVSYGRKDGSTPREFTKVSTFLSWIKKTMKK
                     N"
ORIGIN      
        1 atggctctcc caaaactgta cattgaggtg aaaagtgagc aaggacaaca ctctcgacgg
       61 tgggacctaa gcggccttcc agggaagatg aagctcctct tgctcctgct gaccttctct
      121 ctggccccca ggacacaggc aggggagatc atcgggggac atgaagccaa ccccaactct
      181 cgaccctaca tggcctatct tcagatcatg gataaggatt ctgggaataa aacgtgtggt
      241 ggtttcctca tacgaaagga ctttgtgctg actgctgctc actgtttggg gagtaaaata
      301 attgtcactt taggggccca taacatcaaa gaacaggaga agaagcagca agtcatccct
      361 gtggtgaaaa ttattccaca cccagcctat aatgctaaga caatctccaa tgacatcatg
      421 ctattaaagc tgaagagtaa ggccaagagg actagcgctg tgaagactct caatctgccc
      481 agaagcaact tcaaagtgaa gccaggagat gtgtgctatg tggctggttg gggaaagctg
      541 ggcccaatgg gcgaattccc agacacacta caagaagttg agctaacagt acaggaggat
      601 cagaagtgtg agtcccactt aacaaatgtt tatgacaaag ccaatgagat atgtgcgggg
      661 gacccaaata tcaaacgtgc ttcctttcag ggggactctg gagggcctct tgtgtgtaaa
      721 aaagtggccg caggcatcgt ctcctatgga cgtaaagatg gttcaactcc acgggaattc
      781 accaaagtct ctactttcct atcctggata aagaaaacta tgaaaaagaa ctaactacaa
      841 gaagcagcat ggatcatttc cagactaacc accttcccta tagctgagtc cagtattgct
      901 ctaggacaga tggcaggaac tgaataaagc actttttttc tgactggaaa gactggtttc
      961 atgtccatcc acagggatca accctgtcct tggcagatga atggaatacc tcttctgcca
     1021 caaggctgtt acaacccagt tgacatctgg tagttcaccc tctctacaag agaaaaataa
     1081 tgtttgattg tcccaaacat gtactacttc ccctcaaagt ccttagaatg ttatttaatg
     1141 caagtcatca ttaacagcta cctacagtat tttcacacag tttgacccaa gtcactggtg
     1201 tgttctttgg aagagagcaa gaagtgatag atagaattcc ttttgcttct ctgtgctatt
     1261 tttccccaat agaagacttt tatgttttct atttccttat caaatgaaac ctttaaaatt
     1321 ttatattaat tgctcatttt caaggtacaa cctgatcttt tatgtaaatg atataaaatg
     1381 attaaagaaa actaattaac
//
