LOCUS       NM_001107788            4276 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus GDNF-inducible zinc finger protein 1 (Gzf1),
            mRNA.
ACCESSION   NM_001107788 XM_001057286 XM_230665
VERSION     NM_001107788.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4276)
  AUTHORS   Morinaga,T., Enomoto,A., Shimono,Y., Hirose,F., Fukuda,N.,
            Dambara,A., Jijiwa,M., Kawai,K., Hashimoto,K., Ichihara,M.,
            Asai,N., Murakumo,Y., Matsuo,S. and Takahashi,M.
  TITLE     GDNF-inducible zinc finger protein 1 is a sequence-specific
            transcriptional repressor that binds to the HOXA10 gene regulatory
            region
  JOURNAL   Nucleic Acids Res 33 (13), 4191-4201 (2005)
   PUBMED   16049025
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4276)
  AUTHORS   Fukuda,N., Ichihara,M., Morinaga,T., Kawai,K., Hayashi,H.,
            Murakumo,Y., Matsuo,S. and Takahashi,M.
  TITLE     Identification of a novel glial cell line-derived neurotrophic
            factor-inducible gene required for renal branching morphogenesis
  JOURNAL   J Biol Chem 278 (50), 50386-50392 (2003)
   PUBMED   14522971
  REMARK    Erratum:[J Biol Chem. 2004 Jan 23;279(4):3120]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474026.2.
            
            [WARNING] On Oct 18, 2024 this sequence was replaced by
            NM_001107788.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_230665.4, XM_001057286.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132294,
                              SAMD00132296 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..4276
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..4276
                     /gene="Gzf1"
                     /gene_synonym="RGD1562321; Zfp336"
                     /note="GDNF-inducible zinc finger protein 1"
                     /db_xref="GeneID:311508"
                     /db_xref="RGD:1562321"
     exon            1..247
                     /gene="Gzf1"
                     /gene_synonym="RGD1562321; Zfp336"
                     /inference="alignment:Splign:2.1.0"
     exon            248..1625
                     /gene="Gzf1"
                     /gene_synonym="RGD1562321; Zfp336"
                     /inference="alignment:Splign:2.1.0"
     CDS             265..2388
                     /gene="Gzf1"
                     /gene_synonym="RGD1562321; Zfp336"
                     /note="zinc finger protein 336"
                     /codon_start=1
                     /product="GDNF-inducible zinc finger protein 1"
                     /protein_id="NP_001101258.1"
                     /db_xref="GeneID:311508"
                     /db_xref="RGD:1562321"
                     /translation="MESGTVLLESKSSPLNLLHEMHELRLLGHLCDVTVIVDYQGVRE
                     DFMAHKAVLAATSKFFKEVFLNEKRADGTRTNVYLSEVQVVDFASFLEFVYTARVRVK
                     EDRVQQMLEVAEKLKCLDLSETCLQLKKQMLESVLLELQNFSESQEVEASSGPQVSVT
                     PSSKASVPAGEDAHSNGLVDSSDYPIERLGNGLSPETPSKKCKEKLDKKKDVAKPPFP
                     KIRRASGRLAGKKVFVEIPKKKYTRRLREQQKSAEEAAKNDKCPQDQSPDNERVEAEP
                     ASKSEACPASVEREESLQKVEGEKEEEEGKDGEEKKKSNFQCTVCDKAFLYEKSFLKH
                     IKYHHGVATEVVYRCDTCGQTFANRCNLKSHQRHVHSSERHFPCEMCAKKFKRKKDVK
                     RHVLQVHEGGGERHRCGQCGKGLSSKTALRLHERTHTGDKPYGCTKCDAKFSQPSALK
                     THLRVHTGERPFVCDECGARFTQNHMLIYHKRCHTGERPFMCETCGKSFASKEYLKHH
                     NRIHTGSKPFKCEVCLRTFAQRNSLYQHIKVHTGERPYCCDQCGKQFTQVNALQRHHR
                     IHTGEKPYMCNACGRTFTDKSTLRRHTSIHDKNTPWKSFLVIVDGSPKNDEGQKTEQP
                     DEEYASPKLSDRLLSFGENSHFNNLLEVQGNVPAVQENSSTDTACKAVVSQDALLTTS
                     ISALGELTPQTVSMPAHLPSLTNME"
     exon            1626..1720
                     /gene="Gzf1"
                     /gene_synonym="RGD1562321; Zfp336"
                     /inference="alignment:Splign:2.1.0"
     exon            1721..1888
                     /gene="Gzf1"
                     /gene_synonym="RGD1562321; Zfp336"
                     /inference="alignment:Splign:2.1.0"
     exon            1889..2046
                     /gene="Gzf1"
                     /gene_synonym="RGD1562321; Zfp336"
                     /inference="alignment:Splign:2.1.0"
     exon            2047..4276
                     /gene="Gzf1"
                     /gene_synonym="RGD1562321; Zfp336"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgtgctgcc gactgggtcg tcttctaggc tgtcctctgg cctctgtccc ttggagcggc
       61 gggctgtggg aatataggca cagggcgggg gtcgggggac ggcggctaga ttggccgaaa
      121 gggtccaggc aggctggacc ctttggctct ggaggccgga gggaagggct ggaccttggc
      181 ctcaagaagt tcattctccc tgaggttttg gaagaccatc agtggtccgg aactccgggt
      241 ggccaagctg tctttagaag gaaaatggaa agtggtacag ttttgctgga atctaagtct
      301 tcaccattga accttctgca tgagatgcat gagctccgcc ttctgggcca cctgtgtgat
      361 gtcactgtta tcgtagatta tcagggtgtc cgtgaagact tcatggccca taaagcagtg
      421 ctggcagcca ccagcaagtt ttttaaggag gtgttcctga acgagaagcg tgcagacggt
      481 accaggacta atgtttactt gagtgaagtt caagttgttg actttgcttc atttttggag
      541 tttgtctata ctgccagagt gcgggtgaaa gaagaccgcg tgcagcagat gctagaagtg
      601 gctgagaagc taaagtgttt ggacctgtct gaaacatgct tgcagctgaa gaagcaaatg
      661 ctggagtctg tccttttgga attgcagaat ttctctgagt ctcaggaggt ggaggccagc
      721 agtggccccc aggtgagtgt gactcccagc tccaaagcaa gtgtaccagc aggagaggat
      781 gctcactcca atggccttgt agattcctct gactacccaa tagagagatt gggcaatggc
      841 ctttcaccag aaacgccatc taagaagtgc aaggagaaac tggacaagaa gaaagatgtg
      901 gctaagcctc ccttccctaa gatcagaaga gcgagtggga gactggctgg aaaaaaggtg
      961 tttgtggaaa tccctaaaaa gaaatataca agaaggctcc gagaacagca gaaaagtgct
     1021 gaggaagccg caaagaatga caagtgtcct caggaccaaa gcccagacaa tgagagagtg
     1081 gaggccgagc cagcttccaa aagtgaggct tgccctgcta gtgtggaacg agaggaaagt
     1141 ttgcagaaag tggagggaga gaaggaagag gaggaaggga aggatgggga agagaagaag
     1201 aagagtaact ttcagtgcac agtctgtgac aaggccttcc tgtatgagaa gagtttcctg
     1261 aaacatatca agtaccacca tggagtggcc accgaagtgg tgtaccgatg tgatacctgt
     1321 ggccagacct ttgccaaccg ctgcaacctg aagagccacc agcgccatgt gcacagcagc
     1381 gagcgccact tcccatgcga aatgtgtgca aagaagttca aacgcaagaa agatgtgaaa
     1441 cggcatgtgc tgcaggtgca tgagggtggt ggcgagcggc accgctgtgg ccagtgtggc
     1501 aaaggcctga gctccaagac tgctctgcgg cttcatgagc gcacacacac cggcgacaag
     1561 ccctatggct gtaccaagtg tgatgccaag ttctcacaac cttcagcgct taagacccac
     1621 ctgagagttc atacagggga aagacctttt gtctgtgatg aatgtggtgc aagattcact
     1681 cagaaccaca tgctgattta tcataaaagg tgccacacag gtgaaaggcc ttttatgtgt
     1741 gagacatgtg gtaagagttt tgcttctaag gagtacttaa aacatcataa tagaatccac
     1801 actggatcta aaccctttaa atgtgaagtg tgtttgcgga cctttgccca gcggaattcc
     1861 ctttaccagc atattaaagt ccacacagga gagcggcctt attgttgtga ccagtgtggg
     1921 aagcagttca cccaggtaaa tgctctccag cgccatcatc gcatccacac tggtgagaag
     1981 ccgtacatgt gcaatgcgtg tggacggact tttactgaca agtctactct ccggaggcac
     2041 acctcgatac atgataagaa tacgccgtgg aagtctttcc ttgtcattgt agatggctca
     2101 cccaagaatg atgaagggca gaagacagaa caacctgatg aggaatatgc atcacccaaa
     2161 ctttcagata gattactatc ttttggtgaa aatagccatt ttaacaactt attggaagtc
     2221 caaggcaatg tgcctgctgt gcaggagaac agttctacag acactgcttg caaagccgtg
     2281 gtgtctcagg atgctctgct taccacttcc atcagtgcac ttggtgagct gactccacag
     2341 acagtctcca tgcctgcaca ccttccctca ctgaccaata tggagtgaga acttgaagtt
     2401 gtgtgccaag tagtctgtgt aattgctgta ttccaggtga tgccaggggc tgaggaagaa
     2461 gtctgtgcaa agatgtaggc aagactggct tgcagatttc cccaaacttc catgaccttg
     2521 cacgtctgta tcacacttga agctttcctg ttaacattct gatctgcatg atctcggttc
     2581 catttcatca gcaaacatgg cagttagcgt agctcactta accctggtgt agctgtacac
     2641 gtcaatcaca ctaatgcttg attctcttga tgtctaaacc actgcttgtc ttaatcagag
     2701 tacacagcat tgacccaact cgggaaagtg ctgttcgtga tctcctggtc tcgctcgccc
     2761 tgccttatac gtccatgtgt gtttacgtca ctctggtccc tttagggcat ttttctacaa
     2821 agttaaagta gaactggggc cacttatttt catctgtttc ttcctgagat aaaagcaaat
     2881 gagatttatt ctggggcccc tagatgggat tgaagaagta gatgattcca tttgtttctc
     2941 tccaaacccc tttttgtagg cacagaaaga tgaatggcaa gtggggcatg ctcagtgtag
     3001 tgcctcagca cgtgtgcagt gcaggtaagg agtctgtcat aacattccac ctggatgagc
     3061 tgtgcagctc cagtccctaa gtcagattag gtcaaagctg tcctaccaaa gaatctagta
     3121 aacagttgtc actcttcaga agtgtgggaa atgcagagct aggcgtctag ctaggcacat
     3181 tttcacaagc agcaggaaga gtgagcctgg caaatcttga gtacttttgc caggctttta
     3241 tttataaagt ccagagcccc ccaaataccc atctctacag tggaacatga cacagactag
     3301 taactgctac aaatccacct ctaggagcac gcaggaatct agagcagtgg ttctcaatga
     3361 ccctttccca gaggtggccc taaaccatca gacaacccga gatacttagt tatgattcat
     3421 aacagtagca aaactagtta tgaagtagca acagaaataa ctatggttgg gagtcaccac
     3481 aacatgaaca aagggttgca gcattaggaa agttgagaac ccttgatcta gagggaacca
     3541 gaagccttgg catgctcact tctatgcctt aaccagtgga tcataaaaac caggaatatt
     3601 gtttcaaatg ttcctttggc tttctcatgc tgaattaata attgttcaac aaatttcata
     3661 tgaaaaaatg cattttatgg cacttgctat tcctgatgta tggttgcagg gccttgggtt
     3721 tgtggcccct gtgtcacctg tgacccttaa acattaattt taagagcgcc ttaaaggggg
     3781 aattcttatg ctttctggtt gcttttcctc tgtttttaac ttactaaatt tgctatgaga
     3841 acactctggt ttctagggaa agacacctaa tgttcagggc gaagacagat cacactatga
     3901 tagaaactga gagttcttac ccagtgctta ctttgtggta acaccctaag tagttggtga
     3961 ggccagccaa aggtgttcca ggtgctggta atattttcca cttgctcttg aaagttcagg
     4021 gctgaattat ttcacattca gttatgacct ggcaatctag ttgtgtttac agacaaaaac
     4081 agacaagatt agtaactggc acatgaccat tttatctggt gagagcaaac ctgcccagct
     4141 gatgtactgt gttatgggat aaagtcatct tgatgagaag gaatttaaac aatagattat
     4201 tttgttacct actggaagaa ctgtcttgaa tttgtttctt tagaaattct aaataaaatt
     4261 gtttaatgtg ttaaca
//
