LOCUS       NM_001013233            2210 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus glycophorin C (Gypc), mRNA.
ACCESSION   NM_001013233 XM_344660
VERSION     NM_001013233.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Robledo,R.F., Ciciotte,S.L., Gwynn,B., Sahr,K.E., Gilligan,D.M.,
            Mohandas,N. and Peters,L.L.
  TITLE     Targeted deletion of alpha-adducin results in absent beta- and
            gamma-adducin, compensated hemolytic anemia, and lethal
            hydrocephalus in mice
  JOURNAL   Blood 112 (10), 4298-4307 (2008)
   PUBMED   18723693
REFERENCE   3  (bases 1 to 2210)
  AUTHORS   An,X., Zhang,X., Debnath,G., Baines,A.J. and Mohandas,N.
  TITLE     Phosphatidylinositol-4,5-biphosphate (PIP2) differentially
            regulates the interaction of human erythrocyte protein 4.1 (4.1R)
            with membrane proteins
  JOURNAL   Biochemistry 45 (18), 5725-5732 (2006)
   PUBMED   16669616
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY234182.1.
            
            On Mar 26, 2005 this sequence version replaced XM_344660.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY234182.1, EV779816.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p12"
     gene            1..2210
                     /gene="Gypc"
                     /gene_synonym="GPC"
                     /note="glycophorin C"
                     /db_xref="GeneID:364837"
                     /db_xref="RGD:1310295"
     exon            1..252
                     /gene="Gypc"
                     /gene_synonym="GPC"
                     /inference="alignment:Splign:2.1.0"
     CDS             213..500
                     /gene="Gypc"
                     /gene_synonym="GPC"
                     /note="glycophorin C (Gerbich blood group)"
                     /codon_start=1
                     /product="glycophorin-C"
                     /protein_id="NP_001013251.1"
                     /db_xref="GeneID:364837"
                     /db_xref="RGD:1310295"
                     /translation="MSSPVRTPPPERLEPNPGMSYAVMEIAIIAAVITAVALVLVCLL
                     FLMLRYLYRHKGTYYTNEAKGTEFAESADAALQSDPALQDAGDTSKKEYFI"
     exon            253..303
                     /gene="Gypc"
                     /gene_synonym="GPC"
                     /inference="alignment:Splign:2.1.0"
     exon            304..2193
                     /gene="Gypc"
                     /gene_synonym="GPC"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaaacctca tggccaagtt gtagaaaaaa tagttgaagt gtgcctatct tggagcggag
       61 cccctccctt ctccagccgc gcggagtggg agccctaggt gcaaccaagt agccgggttc
      121 acggtccaga agctggtgac cctttcctac ccaccccacc ccacccccgc ctcagtgcgc
      181 cccaccgcgt ttccccctgc cgccgcgtgg ccatgagcag ccccgtcaga acgccacctc
      241 ctgagcgcct ggagcccaac ccagggatgt cctatgccgt tatggagatt gccatcattg
      301 cagctgtgat cactgcggtg gccttggtcc tggtctgcct cctctttctc atgcttcgct
      361 acctgtacag gcacaagggc acttactaca ccaatgaggc caaaggcacg gagtttgcag
      421 aaagtgcgga tgcagctctg caaagtgacc ctgccctcca ggatgccggg gacaccagca
      481 agaaggaata ctttatctga ggggtagcag acttgacatc cctgcaagac gcttctggct
      541 gcaggagaga aagtaccccc gctgtgtgcc accattatca gcaccaggaa gccctcaagg
      601 gcaccccaag actcttactg cagaacactg ggtgcctgcc aggaaatcga tacagatggg
      661 aggaatcaag gtgcagcgta cctctcccag ggactcattg gccacccaat accattggct
      721 ccgcaaggaa gggagaacat ctggatgcac aggtctccct gggcaatgca ggtgtcgtct
      781 cactagcatg aaaatcctcc tcagtgtgtg tgaggtggtt tggacctggg agtaagttgt
      841 atggaagtgg gacatctgga agctgcctga agataaaggt tccaagtgtc aatcattgac
      901 atttgggaag actaggaggt gccacagcta aaaggcacct tcgtttccca tcaacgcagc
      961 tcaagatgac tacagataag tttgagacgt aactgagcat tctatatcaa atggcactac
     1021 gcttaagtgt ttgggaaaca taaatgccac ccatcgctgg cttttctcca tatagcattg
     1081 tgtctatgtg cgcgggacaa ggactgtcta gttctgccaa aagaagaaag ggaagggtga
     1141 cctttcccct cactagtacc agcttatatg aaaccaacgg aaagaggcta cccagtaatc
     1201 aggccagggg atgaagcact ggtttcttga tacacagttt ttaaaaggag agctgtgttc
     1261 atcaactgtg agtgaagtcc gtcatgccag agtcccagtg aaaatgcctc tatgttataa
     1321 gagactgcag gtccccagac ctggctttgg ctcctctttc ttggtcttag gaccttaagc
     1381 catgtatttg acctctccag ctttaatgtt ggcgttttca agtggaagtg acactaaatt
     1441 gtgttacctc tggttcttaa ctcccagcat tgtgggcagg agcagaagca tcagacatgg
     1501 ggtgttaact gtattccagt gtcagtagca tactagatac atggttagcc tatgttggcc
     1561 aataacaatt catctttgca ccacctctaa gagcctcctg agaagtcgct aatttaaaat
     1621 taataacagg gtgaatatga gctaattagc caaccccttc caggtaagat ttccagcggt
     1681 tctgcagtca ctcacaagac tttgagtcat tgctacattt aaagaccatc cctcaggagc
     1741 cccgtcagca gcgctgtctc cacctagtag ccacatcgtg gtccctggga gactaatgag
     1801 attgcaagct cagtcaagta tggccgccac cagccgaagg agcttcaatt cctcagaatg
     1861 tcgtggggaa gagaagcagt gattcagtta taacaaggag ttataatggt caagtgccag
     1921 atgacccaga ctggaggatg tctatgttct cacctatgaa gtaaaaggct ggcttcagtt
     1981 gacacccact aatctagaga gaccttatct gaacccctag tggatgcttg aaacccaagg
     2041 cagtattgaa cccctttgta tttggctttt ctgcacatac ttatgttaag atttaattta
     2101 taaattaggc acagtaagag attaactgca gtaactaaca gcacaatggc ataattagaa
     2161 ctataaagct aaaataaaag attcttgaaa ctaaaaaaaa aaaaaaaaaa
//
