LOCUS       NM_001401066            1261 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus glycophorin A (Gypa), mRNA.
ACCESSION   NM_001401066 XM_001069014
VERSION     NM_001401066.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Feb 1, 2022 this sequence version replaced XM_001069014.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ225003.1, FQ225938.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760393,
                                           SAMEA5760434 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-43                JAXUCZ010000019.1  44370154-44370196   c
            44-118              JAXUCZ010000019.1  44367733-44367807   c
            119-193             JAXUCZ010000019.1  44363293-44363367   c
            194-223             JAXUCZ010000019.1  44360810-44360839   c
            224-309             JAXUCZ010000019.1  44359769-44359854   c
            310-378             JAXUCZ010000019.1  44357711-44357779   c
            379-1261            JAXUCZ010000019.1  44354669-44355551   c
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q11"
     gene            1..1261
                     /gene="Gypa"
                     /note="glycophorin A"
                     /db_xref="GeneID:688972"
                     /db_xref="RGD:1582935"
     exon            1..43
                     /gene="Gypa"
                     /inference="alignment:Splign:2.1.0"
     CDS             10..408
                     /gene="Gypa"
                     /note="glycophorin-A-like; glycophorin-B-like"
                     /codon_start=1
                     /product="glycophorin-A"
                     /protein_id="NP_001387995.1"
                     /db_xref="GeneID:688972"
                     /db_xref="RGD:1582935"
                     /translation="MTDPTPATVTLNSALVSTSRLASTVHYLSSAAVPTSHAPHHTPL
                     PEVPVRAKDLTDLSSHTGMLEHEFSAPVAILIILGVMAGIIGIILLISYSIGQIIKKR
                     SVDIQPPEDEDQGVPLSSIEQTVNQEFANV"
     exon            44..118
                     /gene="Gypa"
                     /inference="alignment:Splign:2.1.0"
     exon            119..193
                     /gene="Gypa"
                     /inference="alignment:Splign:2.1.0"
     exon            194..223
                     /gene="Gypa"
                     /inference="alignment:Splign:2.1.0"
     exon            224..309
                     /gene="Gypa"
                     /inference="alignment:Splign:2.1.0"
     exon            310..378
                     /gene="Gypa"
                     /inference="alignment:Splign:2.1.0"
     exon            379..1261
                     /gene="Gypa"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actgccaata tgacggatcc gactccagcc accgtgacct tgaattctgc tcttgtatcc
       61 acttcaaggc tggcttcaac tgtacattac ctgagttcag cagcagtgcc aacatcacat
      121 gcaccccatc acacgcccct tcctgaagtg cctgttagag ccaaagacct caccgacttg
      181 tcatctcata caggaatgtt ggaacacgaa ttttccgcgc cagtggcgat actcatcatt
      241 ttgggggtga tggctggaat catcggaatt atccttctca tctcttactc tatcggccaa
      301 ataataaaga aaaggtcagt tgacatacag cctcctgagg acgaggacca gggtgtgcct
      361 ttgagttcta ttgagcagac cgttaatcaa gagttcgcca atgtttgaaa gacctcgagg
      421 aaaacaagac ttcagttggt ggaaaaagta atgcaaaaat cagatgtttc agtaaattat
      481 gtaccctcct gagctgcact gtaagaagaa aatgtcacct tttgagcctc catgattcac
      541 tacagggggt ggggcacctc tgttcactaa taactgaaga tgaagaacaa aagtttcctt
      601 gtaggcttga ttttgctggc agaaatttgt gtaactcttt gactagaaat tttactcaaa
      661 aaaaaatgtc agtcgagttt ctgtgctgtc ctttaaagac tgacgcattc tattctgttg
      721 tggtttgttc atggtgatgt tgtgcaaagg tgtgacatcc aagtttcttc atcacttcaa
      781 ttcctgagcc cattctcatt taatttaagc aaattaaaaa accagcaagt cctcctgtgt
      841 tcttccttgc acacaggcaa gcacacagct ctctgttaat gggaaggaca ctttaccctc
      901 tcagaaatgc cgcaaacata aatataggta aggacacgcc tccattattc ggtatttcat
      961 gggtaactct tgagttttca acaaactttc tgaacccatc cagtggaagc ctcccttgtt
     1021 aataaaactt tctagatata agtgatgaag gggttttgaa actacactgc tgcccattcc
     1081 tttatagaaa aacttaaaat aataatgttt ttaagaggac atgaagttag gaggagtggg
     1141 gaggtagggg tggatgtggg actggcaaag ggagagagta agggataagt atgttcaaaa
     1201 tacattgtat gaaattctcg aattaataaa aatgttttaa aaaatcaaca caaacgcaaa
     1261 a
//
