LOCUS       XM_039083455             993 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus GULP PTB domain containing engulfment
            adaptor 1 (Gulp1), transcript variant X7, mRNA.
ACCESSION   XM_039083455
VERSION     XM_039083455.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039083455.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..993
                     /gene="Gulp1"
                     /gene_synonym="CED-6"
                     /note="GULP PTB domain containing engulfment adaptor 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 10 Proteins, and 93% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     44 samples with support for all annotated introns"
                     /db_xref="GeneID:314543"
                     /db_xref="RGD:1306380"
     CDS             79..993
                     /gene="Gulp1"
                     /gene_synonym="CED-6"
                     /codon_start=1
                     /product="PTB domain-containing engulfment adapter protein
                     1 isoform X2"
                     /protein_id="XP_038939383.1"
                     /db_xref="GeneID:314543"
                     /db_xref="RGD:1306380"
                     /translation="MNRAFSRKKDKTWMHMPEALSKHYVPYNAKFLGSTEVEQPKGTE
                     VVRDAVRKLKFARHIKKSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCA
                     DDKTDKRIFTFICKDSESNKHLCFVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDV
                     ETRKQIAGMQKRIQDLETENMELKNKVQDLENRLRTTQVSSTPAGGVTVTSPSTDIFD
                     MIPFSPISHPSPTSAGNGTQLPPIPSRSSEIKRDLFGAEPFDPFNCGAGDFPPDIQSK
                     LDEMQEGFKMGLTLEGTVFCLDPLDSRC"
ORIGIN      
        1 ggctaggcgg gttcgatcgc cgcttctgcc ggagggtact gggcattact gagctgagca
       61 gttgggagta tcaacatcat gaaccgggct ttcagcagga agaaagacaa aacatggatg
      121 catatgcctg aagccttatc aaaacattac gttccctata atgcaaagtt tcttggcagt
      181 actgaagtgg agcagccaaa gggaacagaa gttgtgagag atgctgtcag gaagctgaag
      241 tttgcaagac acatcaagaa atctgaaggc cagaagattc ctaaagttga attgcaaata
      301 tcaatttatg gagtgaaaat tctcgaacca aaaacaaagg aagttcaaca caactgccag
      361 cttcatagaa tatcattttg tgcagatgat aaaaccgaca agaggatttt caccttcata
      421 tgcaaagatt ctgagtcaaa caaacatttg tgttttgtgt ttgacagcga aaagtgtgct
      481 gaagaaatta cattaacaat tggccaagca tttgacttag catacaggaa atttctagaa
      541 tctggaggaa aagatgtgga aacaagaaaa cagattgctg gaatgcagaa aagaatccaa
      601 gacttagaaa cagaaaatat ggaacttaaa aataaagtac aagatttaga aaaccggttg
      661 agaacaactc aagtgtcctc gactccagct ggtggtgtga cagtgacttc tccttccact
      721 gacatctttg acatgattcc attttcccca atatcacacc cgtctccaac ctctgctggc
      781 aatggcacac agctaccacc catacctagc agatcttcag agatcaaacg ggaccttttt
      841 ggagctgaac cttttgaccc atttaactgt ggagcagggg actttcctcc tgatattcag
      901 tccaaattgg atgagatgca ggaggggttc aaaatgggac taactcttga aggaacagta
      961 ttttgtctcg acccattaga cagcaggtgc tga
//
