LOCUS       XM_039079356             839 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus gametocyte specific factor 1 (Gtsf1),
            transcript variant X4, mRNA.
ACCESSION   XM_039079356
VERSION     XM_039079356.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..839
                     /gene="Gtsf1"
                     /note="gametocyte specific factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:315347"
                     /db_xref="RGD:1310791"
     CDS             180..719
                     /gene="Gtsf1"
                     /codon_start=1
                     /product="gametocyte-specific factor 1 isoform X3"
                     /protein_id="XP_038935284.1"
                     /db_xref="GeneID:315347"
                     /db_xref="RGD:1310791"
                     /translation="MEDTYIDSLDPEKLLQCPYDKNHQIRACRFPYHLIKCRKNHPDV
                     ANKLATCPFNARHQVPRAEISHHISSCDDKSCIEQDVVNQTRNLGQETLAESTWQCPP
                     CDEDWDKDLWEQTSTPFVWGTASFCGNNRAGDRTQGLALPSPANNIVMEHKSNLASGM
                     RVPKSLPYVLPWKNNGNAQ"
ORIGIN      
        1 aagaggcaag gcggtagggt cttggcttgg gtcagcccct gtaagcagtt tgtgtatgag
       61 ataccttcga ggtagtgtcc tccctcactc ctcagcctta agccctgaac accggctgca
      121 tcggccatcg tctgctcgac ggactgcctg cacttgaaca ggactccttt gccatcagca
      181 tggaagacac ttacatcgac tccctggacc ctgaaaagtt actacagtgc ccctatgata
      241 aaaaccacca gatcagggcc tgcaggtttc cttatcatct tatcaagtgc agaaagaatc
      301 atcctgatgt cgcaaacaaa ttggctactt gtcccttcaa tgctcggcac caggttcccc
      361 gggctgagat cagtcatcac atctcgagct gtgatgacaa gagctgtatt gagcaggatg
      421 tggtcaacca aaccaggaac cttggacaag agactctggc tgagagcaca tggcagtgcc
      481 ctccttgtga tgaagactgg gataaagact tgtgggaaca gactagcacc ccttttgtct
      541 ggggcacagc cagtttctgt ggcaacaaca gagctgggga ccgaacccag ggccttgcgc
      601 ttcctagtcc tgcaaacaac atagttatgg aacataagag taaccttgct tcaggcatgc
      661 gagttcccaa gtctctgccc tatgttctac catggaaaaa caatggaaat gcacagtaac
      721 tgtgaacatc tttttcaaat gccagactgt ggaagactct tgcttattcc tgctaccaag
      781 ggttcttctt ttttctcttt atctaattat agaacagtaa actgtctgtg actttcaaa
//
