LOCUS       NM_001135840            1572 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus GTP binding protein 6 (putative) (Gtpbp6), mRNA.
ACCESSION   NM_001135840 XM_344118
VERSION     NM_001135840.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Oct 15, 2008 this sequence version replaced XM_344118.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ214891.1, SRR26643295.45995.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-310               JAXUCZ010000012.1  52234709-52235018
            311-448             JAXUCZ010000012.1  52235828-52235965
            449-519             JAXUCZ010000012.1  52236311-52236381
            520-650             JAXUCZ010000012.1  52236467-52236597
            651-721             JAXUCZ010000012.1  52236821-52236891
            722-880             JAXUCZ010000012.1  52237245-52237403
            881-1089            JAXUCZ010000012.1  52237543-52237751
            1090-1238           JAXUCZ010000012.1  52237914-52238062
            1239-1391           JAXUCZ010000012.1  52238166-52238318
            1392-1572           JAXUCZ010000012.1  52238398-52238578
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..1572
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /note="GTP binding protein 6 (putative)"
                     /db_xref="GeneID:363931"
                     /db_xref="RGD:1305954"
     CDS             1..1542
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /note="putative GTP-binding protein 6-like"
                     /codon_start=1
                     /product="putative GTP-binding protein 6"
                     /protein_id="NP_001129312.1"
                     /db_xref="GeneID:363931"
                     /db_xref="RGD:1305954"
                     /translation="MLFPRVAALPGIWLLRVRRVQHALSLAGTLPRPVRAVSAGSRAL
                     GSVWASDGPVRGGGPEDPREDEEEEELLRVPPLLPFDAQRVCVLHPDVKRPAGKTPRS
                     TAEWQVAEAAALVRALPGWSVARTLVVSSAAPGSRQVFGKGNFRDLTEKIRGCQDITS
                     VFLNVERMTPQTQKELETAWGLRVFDRFTLVLHIFRCNARTREARMQLALAEIPLLRS
                     SVSGDSEQQDQQGWGSRYIMGSGESFSELRARALRDRELRLRRVLERLRDKRRLMRKE
                     RVRREFPVVSVVGYTNCGKTTLIRALTGEATLQPRDQPFATLDVTVHEGRLPSRLRVL
                     YVDTIGFLSQLPHSLIHAFSATLEDVAYSDVLVHVTDVSHPDAELQKATVLSTLRGLG
                     LRPALLESAVEVHSKVDLVPGHTTPCSGALAVSAVSGRGLDELKAALEASVLRATGRQ
                     LLTIRVRLGGPQLGWLYNEAVVQQVQELPEGGAAHVTVVITQAAYGRFQKLFPTDITS
                     DPHTD"
     exon            1..310
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /inference="alignment:Splign:2.1.0"
     exon            311..448
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /inference="alignment:Splign:2.1.0"
     exon            449..519
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /inference="alignment:Splign:2.1.0"
     exon            520..650
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /inference="alignment:Splign:2.1.0"
     exon            651..721
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /inference="alignment:Splign:2.1.0"
     exon            722..880
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /inference="alignment:Splign:2.1.0"
     exon            881..1089
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /inference="alignment:Splign:2.1.0"
     exon            1090..1238
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /inference="alignment:Splign:2.1.0"
     exon            1239..1391
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /inference="alignment:Splign:2.1.0"
     exon            1392..1572
                     /gene="Gtpbp6"
                     /gene_synonym="RGD1305954"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgctgttcc ctcgcgtggc cgcgctcccg ggcatctggc tcctgcgtgt gaggcgtgtc
       61 caacacgctc tgagcctcgc ggggaccctg ccacgtcccg tccgcgctgt cagcgccggg
      121 agccgggcac tggggagcgt gtgggcgtca gacgggcccg tgcgaggcgg aggcccggag
      181 gatccacgtg aggacgaaga ggaggaggag ttgctccgtg taccgcccct cctgcccttt
      241 gacgcacagc gcgtgtgcgt cctgcatcct gacgtcaaac gcccggccgg aaaaacgcct
      301 cgcagcacag cggagtggca ggtggcagag gcagccgcgc tcgtgcgcgc gctcccggga
      361 tggtcggtcg cgcgtaccct ggtggtgtcc agcgcagcgc ctggcagcag gcaggtgttc
      421 ggcaagggca acttccggga cctgacagag aagatcaggg gatgccagga tatcacatcg
      481 gttttcctga acgtggagag gatgacgcca cagacccaga aggagctgga gaccgcgtgg
      541 ggcttgcgcg tgttcgacag attcaccttg gtgcttcaca tcttccgctg caacgcgcgc
      601 accagggagg ccaggatgca gctggcgctg gccgagattc cgctcctcag gtcctccgtg
      661 agcggggact ctgagcagca ggatcagcaa ggctggggct cccggtacat catggggtca
      721 ggtgagtcgt tctcggaact gcgggcgcgt gcactcagag accgggagct gcggctccgc
      781 cgtgtcctcg agcggctgcg tgacaagcgg aggctgatgc ggaaggagcg ggtgcggcgc
      841 gagttccccg tggtgtctgt ggtggggtac accaactgcg ggaagaccac gctcatccgg
      901 gctctgacgg gcgaggccac tctgcagccg cgggaccagc cattcgcaac gctcgacgtc
      961 acggtgcacg aggggcggct gccctcgcgc cttcgtgtcc tgtacgtgga caccattggc
     1021 ttcttgtccc agctgccgca cagcctgatc cacgccttct ctgccacgct ggaggatgtg
     1081 gcctactcgg acgtcctggt gcacgtgacc gatgtgagcc atcccgacgc agaactgcag
     1141 aaagccacgg tcctgtccac actgcggggc ctgggtctgc gccctgcact gctggagtct
     1201 gccgtggagg ttcacagcaa ggtggacctg gtgcctgggc acaccacgcc atgctctgga
     1261 gccctggcgg tatctgcagt ctcagggcgt gggctggacg agctgaaggc ggccctggag
     1321 gcgtcagtgc tgcgcgccac cggcaggcag ctgctcacga tacgcgtgcg cctcggggga
     1381 ccccagcttg ggtggctcta caatgaggcc gtggtgcagc aggtgcagga gcttccggag
     1441 ggcggtgcgg cccacgtgac agtcgtcatc acccaggccg cctatggccg gttccagaag
     1501 ctgttcccca ctgacatcac ttctgacccc cacactgact gacagttcat taaagccggt
     1561 tgtgttcccc tt
//
