LOCUS       NM_001013225            2955 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus GTP binding protein 2 (Gtpbp2), mRNA.
ACCESSION   NM_001013225 XM_001058711 XM_001064572 XM_001064689 XM_343535
VERSION     NM_001013225.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Ishimura,R., Nagy,G., Dotu,I., Zhou,H., Yang,X.L., Schimmel,P.,
            Senju,S., Nishimura,Y., Chuang,J.H. and Ackerman,S.L.
  TITLE     RNA function. Ribosome stalling induced by mutation of a
            CNS-specific tRNA causes neurodegeneration
  JOURNAL   Science 345 (6195), 455-459 (2014)
   PUBMED   25061210
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On or before Sep 14, 2008 this sequence version replaced
            XM_001064689.1, XM_001064572.1, XM_343535.3, XM_001058711.1,
            NM_001013225.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.3294918.1,
                                           SRR26360190.2907867.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN12840110,
                                           SAMN12840115 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-295               JAXUCZ010000009.1  22319275-22319569   c
            296-322             JAXUCZ010000009.1  22317268-22317294   c
            323-507             JAXUCZ010000009.1  22316415-22316599   c
            508-616             JAXUCZ010000009.1  22316023-22316131   c
            617-814             JAXUCZ010000009.1  22315662-22315859   c
            815-989             JAXUCZ010000009.1  22315199-22315373   c
            990-1209            JAXUCZ010000009.1  22314829-22315048   c
            1210-1345           JAXUCZ010000009.1  22314387-22314522   c
            1346-1404           JAXUCZ010000009.1  22314185-22314243   c
            1405-1576           JAXUCZ010000009.1  22313452-22313623   c
            1577-1741           JAXUCZ010000009.1  22312976-22313140   c
            1742-2955           JAXUCZ010000009.1  22311532-22312745   c
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..2955
                     /gene="Gtpbp2"
                     /note="GTP binding protein 2"
                     /db_xref="GeneID:363195"
                     /db_xref="RGD:1306367"
     exon            1..295
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     CDS             110..1918
                     /gene="Gtpbp2"
                     /codon_start=1
                     /product="GTP-binding protein 2"
                     /protein_id="NP_001013243.2"
                     /db_xref="GeneID:363195"
                     /db_xref="RGD:1306367"
                     /translation="MDSRVSELFGGCCRPGGGPAMGGNLKARGAGGSSSCGGPKGKKK
                     NGRNRGGKANNPPYLPPEAEDGNIEYKLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVY
                     QIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGADITVLREREVDYDSDMPRKITEVL
                     VRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSG
                     RTSSISFEILGFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLT
                     SYCPDCALLLVSANTGIAGTTREHLGLALALKVPFFIVVSKVDLCAKTTVERTVRQLE
                     RVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVFLNIL
                     PPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDDGC
                     FLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMNPTICSVFEA
                     EIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFLKHPEYL
                     KVGAKLLFREGVTKGIGHVTDVQAIAAGEAQASMGF"
     exon            296..322
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     exon            323..507
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     exon            508..616
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     exon            617..814
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     exon            815..989
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     exon            990..1209
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1210..1345
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1346..1404
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1405..1576
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1577..1741
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1742..2955
                     /gene="Gtpbp2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actgggccac accccgctct cctccggctg gcccgacgcg gcggtggctg taggggcggt
       61 ggcagtggcg ggggggaggg gtcgggcggg gggctggtgg cagcggcgga tggactcgcg
      121 agtatcggaa ctgttcggcg gctgctgccg acccggagga ggcccggcca tgggcggaaa
      181 cctcaaagct cggggggctg gcggtagcag cagttgcggg ggcccaaagg ggaagaagaa
      241 gaacggaagg aacagaggag gtaaagccaa caaccctccg tacctgcccc cagaggctga
      301 agatggaaac atcgaataca aactgaagct ggtgaaccca tctcagtacc gctttgagca
      361 cttggtgacg caaatgaagt ggcggctcca ggagggacgc ggtgaggctg tctaccagat
      421 tggggtagag gacaatgggc tgctggtggg gctggctgag gaggagatgc gggcttccct
      481 caagaccctg caccggatgg cagagaaggt tggggcagac atcactgttc ttcgggagcg
      541 agaggtggat tatgacagcg acatgccccg gaagatcacg gaggtgcttg tccgaaaggt
      601 ccccgacaac caacagttcc tcgatctccg tgtggccgtc ctagggaatg tggactccgg
      661 gaagtcaacc ttgcttggag tcctgaccca aggagagcta gacaacgggc ggggccgggc
      721 ccgactcaac cttttccgcc acctgcatga gattcagtct ggacgaacct ccagcatcag
      781 ctttgagatc ctgggcttta acagcaaggg agaggtggtg aattacagcg actcacggac
      841 tgcagaagag atctgcgaga gcagctccaa gatgatcacc ttcatcgacc tggcgggcca
      901 ccataaatac ctgcacacca ccatctttgg cctcacctcc tactgccccg actgtgccct
      961 gctcctcgtc agtgccaaca ctggaatcgc tggcaccaca cgggaacatc tggggctggc
     1021 cttggccctg aaagtgccct tcttcatcgt ggtcagtaaa gtggacctgt gtgctaagac
     1081 cacagtggag aggacagtac gccagctgga gcgggtcctc aagcagcctg gctgccacaa
     1141 ggtccccatg ctggtcacct ctgaggatga tgctgtcact gctgcccagc agtttgccca
     1201 gtcacccaat gtcaccccta tatttacact gtccagtgtg tccggagaga gtctggacct
     1261 tcttaaagtc ttcctgaata tcctgccgcc actcaccaac agcaaagagc aggaggaact
     1321 catgcagcag ctgacagaat tccaggtgga tgagatctac acagtcccag aggtggggac
     1381 cgtggttgga gggacactat ccagtggcat ctgccgtgag ggggaccagc tggtggtggg
     1441 cccgacagat gacggctgct tcttggagct gagagtttgc agcatccagc gcaaccgctc
     1501 tgcctgccgt gtgcttcgag ctggccaggc ggctacgcta gcccttggag actttgaccg
     1561 tgcactgctg cgcaagggca tggtgatggt aagccctgag atgaacccca ccatttgctc
     1621 cgtgttcgag gcagagatag tcctactgtt ccatgccacc actttccggc ggggattcca
     1681 ggtgacagta cacgtgggca acgtacgtca gacagcagtg gtggaaaaga tccatgcaaa
     1741 ggacaagctg cggacagggg agaaggcagt ggtacgtttc cgtttcctga aacacccaga
     1801 atacctgaag gtgggcgcca aactgctgtt ccgggagggt gttaccaagg gcatcggtca
     1861 tgtcacggat gtacaagcca tcgcagcagg agaagcccag gccagcatgg gcttctgagt
     1921 cctcaaaaca gctctactgc tgttcctaca atacataagg tgacttccgg ccatgctgcc
     1981 cactgttggc ggctctgtgt gttaataggc tagggagagg aatgtctgct gccactgctg
     2041 cctgccacac ttctggagag gtgtcaagtt tggtgtggcc agggtgggca ggcctgaggg
     2101 agaagacact tcaggcagtg ctcagcagcc gtgtgccccc tggttggttc attaagcctg
     2161 gcagctgcac agtcttgtct actggaggga gcagaacata gccatcttgg ctcaccatca
     2221 ggactgggca tgactcacca gtgtggtctc tgcacttcag gaattgtcaa caactggggt
     2281 ggaccttgac agcacttctt ttttatacct cttctcaagg ccacgtaagt tacctatctc
     2341 tacctgacta tggataacag acagtgctcc tagccatccg gtggacccag ggactgaaga
     2401 gatggcacag agaccgtgaa cgactgtgct cctaccctgt gttgatcctg atgcatattc
     2461 ctgctccgtt tccttctctc aagggccatt tccccagacc ctcctgtcat aggccccact
     2521 tggtgctatt tgtggtgctg gctcaggcgt ggggttgcca ggctaagact tggcccacca
     2581 aaggccagct gcatgtcagt ttctcccccc cccccagtta tgctggcttc cgtgctacat
     2641 caaatagtgt ggtagccaca ggacctaatg cagtttgtgc atcctggggt cctcatcccc
     2701 aaccctgctc ttaacctaaa attttcttgt tttagtattt tgtagtgacc accccttccc
     2761 tctgttgccg ggaaccagga ggaaagggaa ggatgtccta tttcctgttc taggcatgga
     2821 ctcctcctta cctttgttag catcctgggt tcccgtgaac tcagggattt gttgaagatt
     2881 ctctgcatat atatatatat gtatatatat ttaaatacac atatatattg tacagaataa
     2941 aaatgtttta ttgga
//
