LOCUS       NM_001100815            1671 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus GTP binding protein 10 (Gtpbp10), mRNA.
ACCESSION   NM_001100815 XM_001067835 XM_231402
VERSION     NM_001100815.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC111647.10, CV103632.1 and CA508019.1.
            
            On or before Aug 9, 2007 this sequence version replaced
            XM_231402.4, XM_001067835.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132291,
                              SAMD00132292 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-109               AC111647.10        52641-52749
            110-303             AC111647.10        54610-54803
            304-395             AC111647.10        55758-55849
            396-977             CV103632.1         62-643
            978-1671            CA508019.1         1-694               c
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q13"
     gene            1..1671
                     /gene="Gtpbp10"
                     /note="GTP binding protein 10"
                     /db_xref="GeneID:312054"
                     /db_xref="RGD:1305878"
     exon            1..109
                     /gene="Gtpbp10"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..1186
                     /gene="Gtpbp10"
                     /note="GTP-binding protein 10 (putative)"
                     /codon_start=1
                     /product="GTP-binding protein 10"
                     /protein_id="NP_001094285.1"
                     /db_xref="GeneID:312054"
                     /db_xref="RGD:1305878"
                     /translation="MVRCGCALLRKYGNFIDNLRIFTKGGSGGMGYPRLGGEGGRGGD
                     VWVVAHKNMTLKQLKNKYPQKRFVAGGGANSRVSALKGSKGKDCEVPAPVGVSVTDEN
                     GEVLGELNKEKDRILVAKGGLGGKLHTNFLPLKGQKRIIHLDLKVIADVGLVGFPNAG
                     KSSLLSRVSHATPVIASYAFTTLRPELGKIMYNDFKQISVADLPGLIEGAHMNKGMGH
                     KFLKHLERTRQLLFVVDISGFQLSSVTPYRTAFETIILLTKELELYKEELQTKPALLA
                     VNKMDLPDAQVKLHELMKQLQKPEDFLHLFEAKMIPEKAIEFQHIIPISAVTGEGIEE
                     LKNCIRESLDEQDDKENDAFHNKQLLSLQRSGSAS"
     exon            110..303
                     /gene="Gtpbp10"
                     /inference="alignment:Splign:2.1.0"
     exon            304..395
                     /gene="Gtpbp10"
                     /inference="alignment:Splign:2.1.0"
     exon            396..540
                     /gene="Gtpbp10"
                     /inference="alignment:Splign:2.1.0"
     exon            541..614
                     /gene="Gtpbp10"
                     /inference="alignment:Splign:2.1.0"
     exon            615..667
                     /gene="Gtpbp10"
                     /inference="alignment:Splign:2.1.0"
     exon            668..775
                     /gene="Gtpbp10"
                     /inference="alignment:Splign:2.1.0"
     exon            776..853
                     /gene="Gtpbp10"
                     /inference="alignment:Splign:2.1.0"
     exon            854..977
                     /gene="Gtpbp10"
                     /inference="alignment:Splign:2.1.0"
     exon            978..1653
                     /gene="Gtpbp10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtagtgacg tcagaaggcg cgcctggccg aaacctgtcc ggattctgcg ggcgggagtc
       61 ctgccccttg gagctcatgg tgcgctgtgg ttgcgcgttg ttgagaaagt atggaaattt
      121 cattgataat ctaagaatct tcaccaaggg aggaagtggt ggaatgggct accctcgttt
      181 aggtggagaa ggtggaagag gtggtgacgt ctgggttgtg gcccataaaa atatgacctt
      241 aaaacaactt aaaaacaaat accctcagaa acggtttgtg gccggaggag gagcaaacag
      301 tcgggttagt gcactgaagg gctctaaggg aaaggactgt gaagtgcccg ctcccgtggg
      361 tgtctcagta actgatgaaa acggagaagt gctaggagaa ctcaataaag agaaagacag
      421 aattctggtt gctaaaggtg gccttggtgg taaattacat acaaatttcc tacctttgaa
      481 aggccagaag cgaataattc accttgacct aaaagttata gctgatgtag gcctagtagg
      541 attcccaaat gctggaaaat cctccttact gagtcgggtt tcccatgcaa cacctgtgat
      601 tgcaagttat gcatttacaa cactaaggcc tgaacttgga aagattatgt acaatgattt
      661 caaacagatt tcagtagctg atctcccagg tttgatagaa ggagcacata tgaacaaagg
      721 aatgggccac aagttcctca agcatttaga gagaaccaga caactgcttt ttgtcgttga
      781 tatttctgga tttcagcttt cttctgtaac tccatataga actgcctttg aaactataat
      841 acttcttaca aaagagttgg agttgtacaa agaagagctg cagacaaaac ctgcactctt
      901 ggcagttaat aagatggact tgccagatgc ccaagttaag cttcatgaac tgatgaagca
      961 gctgcagaag ccggaagact ttctgcattt atttgaagca aagatgattc cagagaaggc
     1021 tatagaattc cagcatatca ttcccatctc agcagttact ggtgaaggga ttgaagagtt
     1081 gaagaactgt ataagggaat cactggatga gcaggatgac aaggaaaatg atgcatttca
     1141 taacaagcag ctgcttagtt tgcagcgttc cgggtcagcg tcttagactg agccacatca
     1201 aagtgcgctg ctactattct agaaaaggca gcatttaaac ctagtccagc atattgacag
     1261 aatactgctt ggtcctaagg aataggaaaa tcatgtttaa aacacgggtg agcctgcagt
     1321 gcattatgtt caaggaagcc aggcaagcac agcaagacaa atgtcaatgc tctcacatgc
     1381 tgagtcttaa aaggtaaatt gaacagatag gaatactgaa aaatggtaat tgtttatagt
     1441 ataaatagga gctagacgat taagagatgt tggtcaaagg atacaaagtt tcagttaagc
     1501 ctttcagacc tgttgtgtat cttttttgtt tatagagtaa tgtatcatat tttgaaaaat
     1561 tgtaagaaaa ataggtttta agtgttctga ccacaaaaaa aaatttgaga aaaataaatc
     1621 ttttaaaata aattgactct atttcacaac gtgaaaaaaa aaaaaaaaaa a
//
