LOCUS       NM_001199315            2647 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus GTP binding protein 1 (Gtpbp1), mRNA.
ACCESSION   NM_001199315
VERSION     NM_001199315.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Woo,K.C., Kim,T.D., Lee,K.H., Kim,D.Y., Kim,S., Lee,H.R.,
            Kang,H.J., Chung,S.J., Senju,S., Nishimura,Y. and Kim,K.T.
  TITLE     Modulation of exosome-mediated mRNA turnover by interaction of
            GTP-binding protein 1 (GTPBP1) with its target mRNAs
  JOURNAL   FASEB J 25 (8), 2757-2769 (2011)
   PUBMED   21515746
REFERENCE   3  (bases 1 to 2647)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473950.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: GU256773.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..2647
                     /gene="Gtpbp1"
                     /note="GTP binding protein 1"
                     /db_xref="GeneID:300077"
                     /db_xref="RGD:1306758"
     exon            1..232
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     CDS             41..2050
                     /gene="Gtpbp1"
                     /codon_start=1
                     /product="GTP-binding protein 1"
                     /protein_id="NP_001186244.1"
                     /db_xref="GeneID:300077"
                     /db_xref="RGD:1306758"
                     /translation="MAAERSRSPVDSPVPASMFAPEPSSPGAARAAAAAARLHGGFDS
                     DCSEDGEALNGEPELDLTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSD
                     GTEYGLSEADMEASYATVKSMAEQIEADVILLRERQESGGRVRDYLVRKRVGDNDFLE
                     VRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGF
                     DSEGNVVNKPDSHGGSLEWTKICEKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCM
                     LMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGC
                     RKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREE
                     EPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRM
                     PVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILVLHHPTTISPR
                     YQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGRTKA
                     VGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLSKREEGGPSGVPAAGPPSTGDEASS
                     LGTTQAATSSGLQPQPKPSSGGRRRGGQRHKVKSQGACVTPASGC"
     exon            233..344
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     exon            345..525
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     exon            526..874
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     exon            875..998
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     exon            999..1113
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1114..1258
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1259..1441
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1442..1577
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1578..1756
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1757..1957
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1958..2647
                     /gene="Gtpbp1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcgggcgg ccggctgcga attagcctaa gttcttaaag atggcggcgg agcggagtcg
       61 ctccccggtg gactcgccgg tgccggcctc gatgttcgcc cccgagccca gctctccggg
      121 ggcggcccgg gccgccgcgg ccgcggcccg actccacggc ggcttcgact ccgactgcag
      181 cgaggacggc gaggcgctca acggcgagcc ggagctggac ctcaccagca agctggttct
      241 agtgagccct acatcagagc agtatgacag tctacttcgg cagatgtggg agaggatgga
      301 cgagggatgc ggagagacca tatatgtcat tgggcaggga tcagatggga ctgagtacgg
      361 gctgagtgag gctgacatgg aggcctccta cgccacagtg aagagcatgg cggagcagat
      421 agaggctgac gtcatcctcc tgcgggaacg tcaagaatcg ggtggccgtg tgcgtgatta
      481 cttagtcagg aaacgagtcg gagacaatga cttcctggag gtcagggtgg cagtggtggg
      541 caacgtggat gctggcaaaa gcacactcct gggagtccta acacatgggg agctggacaa
      601 tggccggggc tttgcccgcc aaaaactctt tcgccacaaa catgagattg aatctggtcg
      661 aaccagcagc gtgggcaatg acattctggg ctttgacagt gaaggcaatg tggtgaacaa
      721 gcccgacagc cacggcggca gccttgagtg gacaaagatc tgtgagaagt cctccaaagt
      781 gatcaccttc attgacttgg ctggccacga gaagtacctt aagaccactg tttttggcat
      841 gactggccat ttgcctgact tctgcatgct catggtgggc agcaatgctg gcatcgtggg
      901 gatgaccaag gagcacctgg gcttggcact ggcactcaat gtacctgtct ttgtggttgt
      961 caccaagatt gacatgtgtc ctgccaacat ccttcaagaa accctgaagc tgctacagcg
     1021 tctgctgaag tcaccaggct gccggaagat ccctgtcttg gtgcagagca aagatgatgt
     1081 cattgtcaca gcctccaact tcagctctga gaggatgtgc ccgatattcc agatctccaa
     1141 tgtcacaggt gagaaccttg atctgctcaa gatgttcctc aacctcctgt ccccccgcac
     1201 cagctacagg gaggaagaac ctgctgagtt ccagatagat gatacctact ctgttcctgg
     1261 tgtggggaca gtggtgtctg ggaccacact gcggggcctg atcaaactga atgacacact
     1321 gctgctgggc ccagaccctt tgggtaactt cctgtccatt gctgtcaagt cgatccatcg
     1381 caagcgaatg cctgtcaagg aggtacgggg gggccagaca gcctcctttg cactgaagaa
     1441 gatcaagcgc tcatccatcc ggaaaggcat ggtgatggtt tccccacgcc tgaatcccca
     1501 ggcctcctgg gagtttgagg ctgagattct tgtcctccac caccccacca caattagtcc
     1561 acgataccaa gccatggtgc actgtgggag catccggcag acagctacaa ttctgagcat
     1621 ggataaagac tgtctgcgca caggagataa agccactgtc cacttccgct tcatcaagac
     1681 ccctgagtac ctgcacattg accagcggtt ggtgttccgg gaaggtcgaa ccaaggctgt
     1741 tggcaccatc accaagctcc tccagacaac caacaactcc cccatgaact ccaagcccca
     1801 gcagattaaa atgcagtcca caaaaaaggg tcccctgagc aaacgagaag aaggtggtcc
     1861 atctggtgtg ccagcggcag ggcccccctc aactggagat gaggcttcct cgctagggac
     1921 tacacaagct gccacatcca gtggtctcca gccacagccc aagcccagca gtgggggccg
     1981 gcgacgaggg ggccagcgcc acaaggtgaa gtcccagggg gcctgtgtga ctcctgccag
     2041 cggctgctga atgtcccccc ggtccacttg accacccatg ggatcctcac tgctcactgg
     2101 ccactgctca ccaactgggc agagaatttt tgaccgccac ccgcccactc cagtccacag
     2161 ccagagcacc cttgttgcca caccccgatt ttccgggggg gttgtaattt ataatgagca
     2221 gggactagac gtccgaggac tgaccatttg ccacctgaca ccttcctcac tcacagcttt
     2281 cctacatctg ggcccttaat ttctatcttt ttattatata tttgtcccaa gtttgtctgt
     2341 gtgtctgtgt gagtgtgtgc ttgcacacac ctgtagccgg tgtgtgcaga agtgcagctg
     2401 accctgtcag tctccatttc agtcctagtt ggacaccagc ctccaagagc tgcctgcctg
     2461 cctgtccttc catccgtttg tatttgtctc gatgagatcc tcagaacgtc cagggaacct
     2521 cagagcccca ggcacctgtc ttccctggct agtgcccctc ttagctagaa gctcttcctt
     2581 ggggctgacc tgtgggctca gaagattctg ccagagcagg gattccctca atctatgcgt
     2641 tggggag
//
