LOCUS       NM_001109473            4048 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus general transcription factor IIIC subunit 4
            (Gtf3c4), mRNA.
ACCESSION   NM_001109473 XM_001064212
VERSION     NM_001109473.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4048)
  AUTHORS   Vannini A.
  TITLE     A structural perspective on RNA polymerase I and RNA polymerase III
            transcription machineries
  JOURNAL   Biochim Biophys Acta 1829 (3-4), 258-264 (2013)
   PUBMED   23031840
  REMARK    Review article
REFERENCE   2  (bases 1 to 4048)
  AUTHORS   Dumay-Odelot H, Marck C, Durrieu-Gaillard S, Lefebvre O, Jourdain
            S, Prochazkova M, Pflieger A and Teichmann M.
  TITLE     Identification, molecular cloning, and characterization of the
            sixth subunit of human transcription factor TFIIIC
  JOURNAL   J Biol Chem 282 (23), 17179-17189 (2007)
   PUBMED   17409385
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474001.2.
            
            On Oct 4, 2007 this sequence version replaced XM_001064212.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN06680439,
                              SAMN13663617 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4048
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p12"
     gene            1..4048
                     /gene="Gtf3c4"
                     /note="general transcription factor IIIC subunit 4"
                     /db_xref="GeneID:685539"
                     /db_xref="RGD:1592609"
     exon            1..459
                     /gene="Gtf3c4"
                     /inference="alignment:Splign:2.1.0"
     CDS             115..2571
                     /gene="Gtf3c4"
                     /EC_number="2.3.1.48"
                     /note="general transcription factor IIIC, polypeptide 4"
                     /codon_start=1
                     /product="general transcription factor 3C polypeptide 4"
                     /protein_id="NP_001102943.1"
                     /db_xref="GeneID:685539"
                     /db_xref="RGD:1592609"
                     /translation="MSEADQARVGPKADEPSSPAEEKDEGGGKEAAADAAPGPSASFR
                     LMVTRREPAVKLQYAVSGLEPLSWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHR
                     TSVPAPLNSCLLKVGSKTEVAECKEKFASSKDPTISQTFMLDRMFNPEGKALPPMRGF
                     KYTSWSPMGCDANGRCLLAALTMDNRLTVQVNLNRLQWVQLVDLTEIYGDRLYETSYR
                     LSKNEAPEGNLGDFAEFQRRHSMQTPVRMEWSSICTTQQVKHNNECRDVSSVLLAVLF
                     ENGNIAVWQFQLPFVGKESISSCNTIESGISSPSVLFWWEYEHSNRKMSGLIVGSAFG
                     PVKILPVNLKAVKGYFTLRQPVVLWKEMDKLPVHSIKCVPLYHPYQKCSCSLVVAARG
                     SYVFWCLLLISKAGLNVHNSHVTGLHSLPIVSITADKQNGTVYTCSSDGKVRQLIPIF
                     TDVALKFEHQLIKLSDVFGSVRTHGIAVSPCGAYLAIITTEGMVNGLHPVNKNYQVQF
                     VTLKTFEEAAAQLLESSVQNLFKQVDLIDLVRWKILKDKHIPQFLHEALEKKIESSGV
                     TYFWRFKLFLLRILYQSMQKSPSEALWKPTHEDSKILLVDSPGMGDGEDEQQEEGTSK
                     QGTKAGLQEKSKEGGDTEETPEDSLTAVGDTGGREPIEEKLLEIQGKIEAVEMHLTRE
                     HMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDEDYDDRTAQVLIGHISKKMNKQTFP
                     ERCSLCKEILPFTDRKQAVCSNGHIWLRCFLTYQSCQSLIYRRCLLHDSIARHPVPED
                     PDWIKRLLQSPCPFCDSPVF"
     exon            460..2286
                     /gene="Gtf3c4"
                     /inference="alignment:Splign:2.1.0"
     exon            2287..2417
                     /gene="Gtf3c4"
                     /inference="alignment:Splign:2.1.0"
     exon            2418..2506
                     /gene="Gtf3c4"
                     /inference="alignment:Splign:2.1.0"
     exon            2507..4048
                     /gene="Gtf3c4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtggcgctcg ggacctgcgg ggatcgaacg gccgcggagg gctctgggag cggccgagcg
       61 acggtggcga gcgctcggtg tgcccggtaa ctcgacctcc tcgcccggag taagatgagc
      121 gaggcggacc aagcccgggt ggggcccaag gccgacgaac cttcgtcgcc cgcagaggag
      181 aaggacgaag ggggcgggaa ggaggcggct gccgacgcgg ccccggggcc cagcgcctcg
      241 tttcgcctca tggtgactcg gcgggagcct gccgtgaagc tgcagtacgc tgtgagcggg
      301 ttggagccgc tctcctggtc tgaggaccac cgtgtgtctg tgtccacggc ccgcagcatc
      361 gccgtgctag agcttatctg cgatgtgcac aacccaggcc aggacctggt gatccaccgc
      421 acctcggtac ccgctcctct caacagctgc ctcctcaagg ttggctcgaa aacagaagtt
      481 gctgagtgca aggaaaagtt tgcttcctct aaagacccca ccatcagcca gactttcatg
      541 ctggacagga tgttcaaccc tgaggggaag gcattgcccc caatgcgggg tttcaaatac
      601 actagctggt ctcccatggg ttgtgatgca aatggcaggt gcctcttggc agcgctgacc
      661 atggacaatc gcctgaccgt gcaggtaaac ctcaacagac tccaatgggt tcagctggtt
      721 gatctgactg agatttatgg agaccgtctt tatgagacca gttatagact gtctaaaaat
      781 gaggctcctg agggaaacct tggggatttt gctgagtttc agaggagaca cagcatgcag
      841 accccagtca gaatggaatg gtcgagtatc tgtaccactc agcaggtcaa gcacaacaac
      901 gagtgccggg atgtgagcag cgtgctcctg gccgtcctct ttgagaacgg gaatatagct
      961 gtgtggcagt tccagctgcc gtttgtgggc aaggagtcca tctcttcgtg caacactatt
     1021 gagtcaggaa tcagctcccc cagtgtcttg ttttggtggg aatatgagca cagcaatagg
     1081 aagatgagtg gccttattgt aggcagtgct tttggacccg taaaaattct ccctgtcaat
     1141 ctcaaagcag tcaaaggcta ctttacttta cggcagcctg ttgtcttgtg gaaagagatg
     1201 gacaagttgc ctgtgcacag catcaaatgt gtgccacttt atcaccctta ccagaagtgt
     1261 agctgtagct tagtggtggc cgcaagaggc tcctatgtgt tctggtgtct tcttctgatc
     1321 tccaaggcgg gtctgaatgt tcacaattcc cacgtcacag gccttcactc gctgcccatc
     1381 gtctccatta ccgcagacaa gcagaacgga accgtgtaca cctgctctag tgacggaaag
     1441 gtgaggcagt tgattcccat cttcacagat gttgcattaa aatttgaaca ccagctgatt
     1501 aagctctcag atgtatttgg ctcagtgagg actcacggca ttgcagtgag cccctgtggt
     1561 gcttacctgg ccatcatcac cactgagggc atggtcaatg gcctccatcc agtgaacaag
     1621 aactaccagg ttcagtttgt tactctcaag acctttgaag aggcagctgc tcagctcttg
     1681 gagtcttcag ttcagaatct ctttaagcag gtagacttga ttgacttagt ccgctggaaa
     1741 attttaaaag ataaacatat tcctcagttt ttacatgaag ctttggaaaa aaagattgaa
     1801 agcagtgggg ttacctattt ttggcgtttt aagcttttcc tcctaaggat tttgtatcag
     1861 tcaatgcaga aatccccatc cgaggcctta tggaaaccca cccatgagga ctcaaaaatc
     1921 ttactggttg actcacctgg gatgggcgat ggtgaggatg agcagcaaga ggaaggtact
     1981 tccaagcagg ggacgaaggc tggcctgcag gagaagagca aagagggtgg tgacacggag
     2041 gagactcctg aggattcact cactgccgtg ggagacaccg gaggccgtga acccatagag
     2101 gagaagctcc ttgagatcca agggaagatt gaggctgtgg agatgcacct gaccagggag
     2161 cacatgaagc gggtcctcgg agaagtgtac ctgcacacct ggatcacgga gaacaccagc
     2221 atccccacca gagggctctg caactttctc atgtctgatg aagattatga tgacagaaca
     2281 gcacaggtct tgattggaca tatctccaag aagatgaaca agcagacctt ccctgagcgc
     2341 tgcagtctgt gtaaggagat cttaccattc acagatcgca agcaagctgt ttgttccaat
     2401 gggcacatct ggctccggtg ctttctaacc taccagtcct gccagagctt gatctacagg
     2461 cggtgtttgc tccatgacag catcgccagg caccctgttc cagaagatcc tgactggatt
     2521 aagaggttgc tgcagagtcc ttgtcctttc tgtgattctc ctgtcttctg agttcggtga
     2581 ggaggatgcg ggaacatgaa gttggctaaa gagagtgccc tgaagcctga agagcaggtg
     2641 cgctggagag agcctggcgc tgctcagtgg agagacactc tgctaactgg aagggggagg
     2701 tcatcctagg agctcatttc accagcacac acaccgtctt cacgtactga aggcgatctt
     2761 gtaaatgact agattcagag agttgagtca tgtaagggga gcattagccg tccccagctc
     2821 cccacctggt gaggaccact tgcttcccaa gtgtcttgcc taaagcagct tgagcagaag
     2881 ccttctgctt ctagaacgca aaggtctctt ctagagaatc taaggacctt ctcgtgagtt
     2941 aggttttcgt ccttgctttg ttctgggact gcctgtagct ccagagggct tacattggtt
     3001 ggtacatgca tgacactgcg tatgccaata caccttcaag tgtatgaggc cagctgtttg
     3061 tggctggtgt gtgctcagca gactcattgc ccattgactg gttttcactc atatggaaga
     3121 cattttccta aaactatatt tttgaagcca agaatagaat catcttaatg tatcaaatga
     3181 tcaggtgact attagaagtt aataattgtc atctagtttt atctcctgtg tcatcagatt
     3241 tcctgtcccg gctctttagt gtgtaagagg agattaagta ccccggccct catcacagct
     3301 ccacttcatg cccatgtggt aacctagata tttgtacata cgggggaaat gttgtctcct
     3361 tttagtatta aatcaaagct tcagtatttc taacactgac gtatcccgac atctcactga
     3421 gtattggggg aaggctggtc tagagacctc tggagaaggc tggtctagag aaagatggag
     3481 aaaggtggag tggaggtcct tgagctctgt gctacaagca tgtgcagctc aagtggaaag
     3541 cctaagaatt tcctctcttg ccaaaggccc tccatctttg gaatacaggt atttttctgt
     3601 gggcttaagg aggagacacg cactatcagt tggctgctag ctcttcgctg agacctgaag
     3661 cattctggaa tggtggtctg gggtcatcag agtaagtctc ctaggattgg tgctaatgac
     3721 ttggactgca gtgcacacat tctgaagctg tgcggttgga gagtgaggcg gaaactagag
     3781 agcatgaaat gctttactcc ttgatgatcc ttttttaatc attattatta ttattatttt
     3841 aacatacttt cccactttga ttttatatcc ttggcaaaag acatttcgtg gtcctcactt
     3901 cagaaatgat gtcttagtac ttgggtacca ccacgagaga cagaccacat gccaccctgc
     3961 cacacttcct gccctgaaaa gtagctgcac actgggcaca gaccctaaga cgcttccaga
     4021 agctgctctg aaatttccta ttaaggtt
//
