LOCUS       NM_001108239            3492 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus general transcription factor IIIC subunit 3
            (Gtf3c3), mRNA.
ACCESSION   NM_001108239 XM_001066298 XM_237623
VERSION     NM_001108239.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3492)
  AUTHORS   Vannini A.
  TITLE     A structural perspective on RNA polymerase I and RNA polymerase III
            transcription machineries
  JOURNAL   Biochim Biophys Acta 1829 (3-4), 258-264 (2013)
   PUBMED   23031840
  REMARK    Review article
REFERENCE   2  (bases 1 to 3492)
  AUTHORS   Dumay-Odelot H, Marck C, Durrieu-Gaillard S, Lefebvre O, Jourdain
            S, Prochazkova M, Pflieger A and Teichmann M.
  TITLE     Identification, molecular cloning, and characterization of the
            sixth subunit of human transcription factor TFIIIC
  JOURNAL   J Biol Chem 282 (23), 17179-17189 (2007)
   PUBMED   17409385
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473965.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001066298.1, XM_237623.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q31"
     gene            1..3492
                     /gene="Gtf3c3"
                     /note="general transcription factor IIIC subunit 3"
                     /db_xref="GeneID:316810"
                     /db_xref="RGD:1309185"
     exon            1..148
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..2698
                     /gene="Gtf3c3"
                     /note="general transcription factor IIIC, polypeptide 3,
                     102kDa"
                     /codon_start=1
                     /product="general transcription factor 3C polypeptide 3"
                     /protein_id="NP_001101709.1"
                     /db_xref="GeneID:316810"
                     /db_xref="RGD:1309185"
                     /translation="MSGFSPELIDYLEGKISFEEFERRREERKTREKKSVQEKGKSSP
                     KENPGDAEVPSSSGIDSAKSQDRDANEGETSDGVSKSVHKVFASMLGETEEEEEEEEE
                     EEEEEDTPEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARG
                     EHEEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWV
                     RLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILN
                     LLSPSDGERFMQLARDMAKSYYEANDSTSAINIIEEAFSKHQGLVSMEDVNIAAELYI
                     SNKQYDKALEVITDFSGIILEKETLEEGTSEENKAAETVTCSIPDSVPIDITVKLMVC
                     LVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERY
                     NLAVVWLRHAECLKALGYMERAAESYSKVVDLAPLHLDARISLSILQQQLGRPEKALE
                     ALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYLDTLLTMLAMLLKVAMN
                     RAQVCLISSSKSGERHLYLIKVSRDKISDNNEQETSNYDAKAIFAVLTSVLPKDDWWN
                     LLLKAIYTLSDLSRFQEAELLVDSSLEYYSFYDDRQKRKELEYFGLSAAILDKNFRKA
                     YDYIRVMVMENVNKPQLWNIFNQVTMHSQDVRHHRFCLRLMLKNPDNHALCVLNGHNA
                     FVSGSFKHALGQYVQAFRAYPSEPLYNLCIGLTFIHMASQKYVLKRHALTVQGFSFLN
                     RYLSIRGPCQESFYNLGRGLHQLGLTHLAIHYYQKALALPPIVVEGIEVDQLDLRRDI
                     AYNMSLIYQSSGNTAMAQKLLYTYCVI"
     exon            149..260
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            261..448
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            449..572
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            573..764
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            765..930
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            931..1078
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            1079..1151
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            1152..1255
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            1256..1427
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            1428..1630
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            1631..1732
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            1733..1868
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            1869..2106
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            2107..2297
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            2298..2422
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            2423..2575
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
     exon            2576..3492
                     /gene="Gtf3c3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgctgcacc tttacccgcc ggctgcgctg tgttggcccc gcagacatgt cggggttcag
       61 cccggaactt atcgactacc tagaagggaa aatctccttt gaagagttcg aaaggcggag
      121 agaagagaga aaaactcggg agaaaaaaag tgttcaggaa aaagggaaat cgtcacccaa
      181 agaaaaccca ggtgatgccg aagtcccatc atcatcagga attgactccg ccaaatccca
      241 ggacagagac gccaatgagg gagaaacgtc agatggggtg agtaagtcag ttcacaaagt
      301 ctttgcttcc atgctcggag agaccgaaga ggaggaggag gaggaagagg aggaggagga
      361 ggaggaggac acaccagagc agcccaccgc aggcgatgta tttgtattgg agatggttct
      421 caaccgtgaa accaagaaaa tgatgaaaga gaagaggcct cggagtaaac tccccagagc
      481 cctgagaggt ctcatgggtg aagccaatat tcgctttgct cgaggagaac atgaagaagc
      541 catattgatg tgcatggaaa tcataagaca agctcctttg gcttatgagc cattctctac
      601 gcttgccatg atttacgagg atcaaggtga catggagaaa tcgttgcagt ttgagttgat
      661 tgctgcacat ttaaatccca gtgacacaga agaatgggtt aggctggcgg aaatgtctct
      721 ggaacaagat aatattaagc aggctatttt ttgctataca aaagctctta aatacgaacc
      781 tactaatgtc cgttacctgt gggagagatc aagcctttac gaacagatgg gtgatcataa
      841 aatggccatg gatggctata ggcgcatttt aaatcttctg tctccatctg atggggaacg
      901 cttcatgcag ttggctagag atatggccaa gagttactat gaagccaatg acagcacttc
      961 agctattaac ataattgaag aagctttctc aaaacatcaa ggtttagtct ccatggaaga
     1021 cgttaacata gcggctgaat tatatatctc caacaagcag tatgacaaag ccttggaggt
     1081 aattacagat ttttctggaa ttatcctgga aaaggaaact ttggaagaag gcacctcaga
     1141 agagaataaa gctgctgaga ccgttacctg ttctatacct gacagcgtgc caatagatat
     1201 cacagtgaag ctgatggtct gcctggtcca tctcaacatc ctcgagcctc tcaatcctct
     1261 cttgacaaca ctggtggaac agaatcctga agatatgggc gacctctacc ttgatgttgc
     1321 tgaagctttt ctggatgttg gtgaatataa ctctgccctt cccctgctca gtgccctggt
     1381 gtgctctgaa agatacaacc ttgcagtagt gtggcttcgg catgcagagt gtttaaaggc
     1441 cttgggctac atggagcgcg ctgctgaaag ctacagcaaa gtggttgacc tggctccact
     1501 ccatttggat gcaaggatct cgctttccat ccttcagcag cagctggggc gccctgagaa
     1561 agctctggaa gctctagaac ccatgtatga cccagacacc ttagcccagg acgcgaatgc
     1621 tgcacagcag gaactgaagt tactgctcca tcgttctact ctattgtttt cacaaggcaa
     1681 aatgtacggc tatctggata ccctgctaac catgcttgct atgcttttaa aggttgcgat
     1741 gaatagagcc caagtttgtt tgatatccag ttccaaatct ggagaaagac atctctacct
     1801 tattaaagtg tcaagagata aaatatcaga caacaatgag caagaaacat caaattatga
     1861 tgcaaaagca atatttgctg tactcacaag tgtcttgcca aaagatgact ggtggaacct
     1921 tctcctaaag gccatatata ccctgagtga tctgtcccgg ttccaagaag ctgaattgct
     1981 cgtagattct tccctggaat attattcatt ttatgatgac agacagaaac gcaaagaact
     2041 agaatacttt ggtctctctg ctgcaattct ggacaaaaat ttcagaaagg cctatgacta
     2101 tatcagggta atggtaatgg aaaatgtcaa taagccccag ctgtggaata ttttcaatca
     2161 agttaccatg cactcccaag atgtaagaca tcatcgcttc tgtctccgtc tgatgctgaa
     2221 gaatccagat aatcatgctc tgtgcgtttt gaatggacac aatgcatttg tatctggcag
     2281 tttcaaacat gcacttggac agtatgtcca agccttccgt gcctatccca gtgagcctct
     2341 ttacaatctc tgcataggcc tcacctttat tcacatggca tctcagaagt atgtgctgaa
     2401 gaggcatgcg ctgactgtgc agggattttc cttccttaat cgatacctca gcatccgtgg
     2461 gccttgccag gaatctttct acaatctggg ccgcggcctt catcagctgg ggctgacaca
     2521 ccttgcgatc cactattacc agaaggctct ggcacttcct ccgattgtgg tagagggtat
     2581 agaagttgac cagttagatt tacgaagaga tattgcctac aatatgtctc tcatctatca
     2641 gagcagtggg aacactgcaa tggcacaaaa gcttttgtat acctactgtg tcatataagc
     2701 agtgtaacgt ataggatgat gtgtggacca taccttctgt tgagacctta ttgttcttga
     2761 tgataaaatg gtactgtcat cactgtacct actgcagggg ttgtagctca gctgtagact
     2821 gcctgcttgc atcatatgta caaggctccg gattcaagcc tttgaaaatc gaaacactgc
     2881 ttttgtctct ggaatatatg caaagctatt attcctatga gaatgtacat attattcttt
     2941 tctgttagca ttctacaata aaatctttcc taacacctaa atggacaata ttggcttgag
     3001 tcagctggaa ctgaacatac tattttctac ttaatatcta ctgacctcct gagtcccagg
     3061 tgttttgatg gtgctggtat atgggagaca gacagtgtgg tttgtccttc aggcattaca
     3121 gagtacacta ctgagatagc caccactgag gacagttatt tatgtattta ttttcttgtg
     3181 ctatatattg aaaccagcgc cttgtactgc tatgctaagc aagtgatata ccactgagct
     3241 acatcctcag cctgcagttt tgttttgttt gttgagacag ggtttctctt tgtagtcttg
     3301 actatcctgg tacttagtct gtagaccagg ccggccttga cctcaggcct gcttctgcct
     3361 cccaagtact aagattgaag gtgtgtgcca ccaccaccca gttgcaccgt tcttaaatat
     3421 aaagtgtgaa catgtatttc tctgaaatat ttgttccatt tatatacggc accatttctc
     3481 atagctatta ct
//
