LOCUS       NM_001395013            2771 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus glutathione S-transferase, C-terminal domain
            containing (Gstcd), transcript variant 3, mRNA.
ACCESSION   NM_001395013 XM_017590936
VERSION     NM_001395013.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2771)
  AUTHORS   Obeidat,M., Miller,S., Probert,K., Billington,C.K., Henry,A.P.,
            Hodge,E., Nelson,C.P., Stewart,C.E., Swan,C., Wain,L.V., Soler
            Artigas,M., Melen,E., Ushey,K., Hao,K., Lamontagne,M., Bosse,Y.,
            Postma,D.S., Tobin,M.D., Sayers,I. and Hall,I.P.
  TITLE     GSTCD and INTS12 regulation and expression in the human lung
  JOURNAL   PLoS One 8 (9), e74630 (2013)
   PUBMED   24058608
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2771)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On May 26, 2021 this sequence version replaced XM_017590936.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.14487.1,
                                           SRR26360181.327790.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-172               JAXUCZ010000002.1  224265730-224265901 c
            173-610             JAXUCZ010000002.1  224259625-224260062 c
            611-1078            JAXUCZ010000002.1  224258366-224258833 c
            1079-1330           JAXUCZ010000002.1  224248939-224249190 c
            1331-1424           JAXUCZ010000002.1  224247186-224247279 c
            1425-1540           JAXUCZ010000002.1  224189616-224189731 c
            1541-1585           JAXUCZ010000002.1  224189418-224189462 c
            1586-1714           JAXUCZ010000002.1  224187679-224187807 c
            1715-1848           JAXUCZ010000002.1  224183270-224183403 c
            1849-1879           JAXUCZ010000002.1  224181377-224181407 c
            1880-1949           JAXUCZ010000002.1  224177561-224177630 c
            1950-2771           JAXUCZ010000002.1  224173764-224174585 c
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q43"
     gene            1..2771
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /note="glutathione S-transferase, C-terminal domain
                     containing"
                     /db_xref="GeneID:310855"
                     /db_xref="RGD:1311822"
     exon            1..172
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     exon            173..610
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     CDS             194..2086
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /note="glutathione S-transferase C-terminal
                     domain-containing protein-like"
                     /codon_start=1
                     /product="glutathione S-transferase C-terminal
                     domain-containing protein"
                     /protein_id="NP_001381942.1"
                     /db_xref="GeneID:310855"
                     /db_xref="RGD:1311822"
                     /translation="MKGIKENAVESLYLEYSHQIEGCIFPLHTSVTLFLLSYCECKVF
                     NVYLVPTEEGADTSFLKEALPQDVEAQVLSKQALPPIVQSCCLPAVVNQPDTFCRAGL
                     AVVLRHIIQKSYEAEPSRKEILELLGFKKTCLKACAEVSQWTRLCELTIPLAVENFLQ
                     ESSDDPPTIPEEILELERKLSEPVRVHNDDKLRRQKLKQQKASSSEPPSGKGKAKTKV
                     RAHKTPKDVAGSSKSLELKVAFSKLTVQEDAEATNREPSHIRKATASELPPLEHVFAE
                     GLYFTLADIVLLPCVHHFLVMICKKFSEKLEQFPLLTSWYQRIQEVPKVKTAAFKCGI
                     CFLDLPELLTPESKEPVNSSDTASVDEQSDPLFVGGPRPTMTKLMEKGIEAMFSPHPC
                     PAWTLDWSSLPAAVSPKEGKMSTDRALRKQQQLNNLAYLVLDRAKPGDRIVDFCSGGG
                     HVGIVLAHVLPLCQVTLIENKEISLIRAKKRSDELGLSNIWFIQANMEYFTGVFDIGV
                     ALHACGVATDMVIQRCIQTRASFITCPCCYGFIQNTSKFNFPKSEKFKNTLSYKEHML
                     LCRFADQTAMQLPPQRRLIGKQCMCLVDLDRATAAEEQGYSVQVISMEPESCSPKNNM
                     IVGVPV"
     exon            611..1078
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     exon            1079..1330
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     exon            1331..1424
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     exon            1425..1540
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     exon            1541..1585
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     exon            1586..1714
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     exon            1715..1848
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     exon            1849..1879
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     exon            1880..1949
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
     exon            1950..2771
                     /gene="Gstcd"
                     /gene_synonym="RGD1311822"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actccgggtg cccctcgcgg ggtctcgagc ctcccggagg ctccaggaag cggggaccct
       61 cgtcacaact caccgctccg ccccggcact cggtcggttc ccagtagctc tcttcgaatc
      121 cgtccccgcc ctaaccagcc taagaagaga gaaacaaagg ttccagcaac aggtgatcca
      181 atgacaacag aaaatgaaag gcattaagga aaacgctgtg gaatctctgt acctggagta
      241 ctctcaccaa atagaagggt gcatctttcc tctccacaca tctgtaactt tgtttttact
      301 gtcgtactgt gaatgcaagg tctttaacgt ttacctagtc cctactgaag aaggtgcaga
      361 cacttcattc ctaaaagagg ccctgcccca ggacgtggag gcacaggttc tctcaaagca
      421 ggccctccct ccgatagtcc agagctgttg tctgcccgcc gtggtcaacc agcctgacac
      481 tttttgtaga gcaggtcttg ctgttgtcct gagacacata atccaaaaat cctatgaagc
      541 cgagccctcg agaaaagaaa ttttggaact tctgggtttt aaaaagactt gcttgaaggc
      601 ctgtgctgaa gttagtcagt ggaccaggct atgtgaactc accatccctt tggctgttga
      661 gaattttctc caagagtcct ctgacgatcc cccaaccatc cctgaagaaa tactagagct
      721 cgagagaaag ctcagcgagc cagtcagagt acacaatgat gacaaactcc gacgacagaa
      781 gctgaagcaa caaaaggcgt ctagcagtga gcctccctct ggtaagggaa aagcgaagac
      841 caaggtgcgt gcacacaaga cacccaaaga tgtggctggt tcgtccaaga gtctagagct
      901 gaaggtggcc ttctccaagc tcacggtgca ggaagatgca gaagctacca acagggagcc
      961 ttctcacatc aggaaagcaa cggcttctga gctcccgcct ctggagcacg tgtttgcaga
     1021 agggctgtac ttcactctgg cagacatcgt gcttctgccc tgtgttcacc actttttggt
     1081 aatgatctgc aagaaatttt ccgagaagct ggaacagttc ccactcctca cctcttggta
     1141 tcagaggatt caggaagtgc caaaagtcaa aacagcagcc tttaagtgtg gaatctgctt
     1201 tctggattta ccagaattgc tgacccctga aagtaaagag cctgtgaatt ccagtgacac
     1261 agcttctgta gacgagcaga gtgacccttt gtttgtagga ggaccaaggc caactatgac
     1321 caagttaatg gaaaagggca ttgaagccat gttttctccg cacccttgtc ctgcttggac
     1381 ccttgactgg agcagccttc ctgccgccgt cagcccgaag gaaggtaaaa tgtccactga
     1441 tcgagctttg aggaagcagc aacaattaaa caacctcgcc tatctggtgc tcgatcgtgc
     1501 caaacctggt gacagaattg tggatttctg cagtggtggg ggccatgttg gaattgttct
     1561 cgcgcatgta ctgcccctgt gccaggtcac attaatagag aacaaggaaa tatcactaat
     1621 tcgtgctaag aagagaagtg acgaacttgg tttaagcaat atctggttca ttcaagcaaa
     1681 tatggagtat tttacaggag tgtttgacat tggggtggct ttgcacgctt gtggagtggc
     1741 aacagacatg gtgatccagc gctgcatcca aacacgagct tccttcatca cgtgcccctg
     1801 ctgttacggg ttcattcaga acacatcaaa gtttaatttc ccaaaaagtg aaaaattcaa
     1861 gaacacttta tcatacaagg aacacatgct cctctgcaga tttgcagatc agacagctat
     1921 gcagctgcca ccccagcgga gactcatagg gaagcagtgt atgtgcctgg tggatctgga
     1981 ccgtgcaaca gcagcagaag aacagggcta ctctgtccaa gtgatttcta tggagccaga
     2041 gagctgctct cccaaaaata acatgatcgt gggcgtcccc gtgtagaatg gggcacacac
     2101 acttgatgct ttgccatggg cttcatgagg agcgcccagg ggcattcagg aagttggtgt
     2161 gttagtggaa gcagcgctga gtgtcttgag cctgttgaaa aagctacagg aagatcttgg
     2221 aagagggatg ctctggctct gtgtgcagaa ggatgactgc cttgctcgag ggaatcccct
     2281 gaagccttag ctgccaaaag aatcattctc agtggccaag attccgtcag cagaaccatt
     2341 tcctcagacc ttttcctgat cgtgtcagtg ggatactcaa gccatgcgct cacagccttc
     2401 attttataac cttttgatat tcatacttgg tgatcaaaac taaactcgag gtggttgtgg
     2461 ttttttatag ttttaacaat gtatcttttg tatagatttt ttaaatctag gatggtaaat
     2521 tcgatgtgat ttttcctttt tttaaatctg agattggttg aatttgcata tcatgtacta
     2581 tcctccttta aatatatgtc ccataaatta acaaataagt ttattgctgg ttgaagactt
     2641 cgcatgaaaa tttataagtc aattgcacta aattatacat tctaaaagtg gaatttagat
     2701 ataaatttta actgaacagt aaatttatgc tctgtttagt tacaacaagt aaataacaaa
     2761 tgctagcagt c
//
