LOCUS       XM_039087067            2082 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glycine rich extracellular protein 1
            (Grep1), transcript variant X6, mRNA.
ACCESSION   XM_039087067
VERSION     XM_039087067.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2082
                     /gene="Grep1"
                     /note="glycine rich extracellular protein 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:360486"
                     /db_xref="RGD:1307032"
     CDS             268..1929
                     /gene="Grep1"
                     /codon_start=1
                     /product="glycine rich extracellular protein 1 isoform X6"
                     /protein_id="XP_038942995.1"
                     /db_xref="GeneID:360486"
                     /db_xref="RGD:1307032"
                     /translation="MEPPKPGFGVAVKPQKSGYGLGLRVFPGVGAQPGFNGRNGVGIS
                     ASPKAGSLPGPPTQNGHGPGTSESMKSPKPGFSNGNGIGAEALPGVGAQPGLGAGAKP
                     QKAGFGNGNTLGAQPGPAVQNGFGAGFGGVGKAQKPGLGNGNEQGVGTIPGTGAQPDL
                     GGGLRPQKPGYEAVKSQKSGFGNRSGFGLGAQPGDGGPPAQNGHGPGTSEGMKPPKPG
                     FSNGNGIGAEALPGVGAQPGLVAQNGIGAGYGNKNGLDALPDVGVGGKLRKTAPAAQN
                     GYRQGYGTDLKTQKPGSWNGHGLGVQLGYRNGLGPRTFQGQGLRPGYRLGIPLGLGVS
                     MKLPKAGYNLGNGVAAQPGSCNGGIAPPQFLPGPPTTVPSDKGGGWGLKSQLPPPVQN
                     GKFPAPTPAIQWGPKPQKAGYQPSDGYGAGAQLGFHGGLKLQKVGFHYGNAALEAGIL
                     PEILQSGFPTANGFSNGLREETLLYPKATVPTLERHGQAGAFQPWGAGVKPEYGYAGL
                     GIQTGPYGQLRPELRLEHLGDPELKTYTKSPLGNGYRGHCPSGEC"
ORIGIN      
        1 ggctagccga gcccgtgaca aacagggagg ggtggggctg ctgcaggggt gcgaccggac
       61 actgagggga ggctgggggt ccgtcacggg gcgcagtgca gcaggagcgc gggccagggc
      121 gccgggcaga agagcggcgc ggccgggaga tctcactcgg gacttccccg actccctccc
      181 aacctgggga aaggatacag cccctccggt ggcctgggaa caggctctct aagtcaaaat
      241 ggctatggaa caggtgttgg aggcggtatg gaacccccaa agccaggctt tggagtggct
      301 gtgaagcccc agaaatcagg atatggactt gggctgagag tctttccagg agtgggagct
      361 cagccaggat ttaatggcag gaatggcgtg ggcatcagtg catcccctaa ggcaggaagc
      421 ttgccaggtc ccccaactca gaatggccat ggaccaggta ccagcgagag catgaaatct
      481 ccgaagccag ggttcagcaa tgggaacgga ataggagctg aggccctccc aggagttgga
      541 gcccagccag gcttgggagc tggtgcgaag cctcagaagg caggatttgg caatggaaac
      601 accttggggg cacagccagg tcctgcagtt cagaacggct ttggagcagg ctttggaggg
      661 gttggaaaag cccagaagcc aggacttgga aacggaaatg agcagggagt tgggaccatc
      721 ccgggaactg gagcccaacc agaccttgga ggaggactga gaccccagaa gccaggctac
      781 gaagctgtga agtcccagaa atctggattc gggaacagga gtggatttgg cctgggagcc
      841 cagccaggtg atggaggtcc cccagctcag aatggccatg gaccaggtac cagtgagggc
      901 atgaaacctc cgaagccagg gttcagcaat gggaacggaa taggagctga ggccctccca
      961 ggagttggag cccagccagg cctggtagcc cagaatggaa ttggagcagg atatgggaac
     1021 aaaaatggac tggacgccct gccagatgta ggagtaggtg ggaagcttcg gaagacagcc
     1081 cctgctgctc aaaatggcta ccgacaaggt tatggaacgg acttgaagac tcagaaacca
     1141 ggatcttgga atggccatgg ccttggagtc cagctggggt acagaaatgg gctggggcct
     1201 agaaccttcc aaggccaggg gctacggcca gggtacagat tgggaatccc actaggcctg
     1261 ggagtgagta tgaaacttcc aaaggcagga tacaaccttg gaaatggagt ggcagcccag
     1321 ccaggttcct gcaatggtgg cattgctcca ccacaattcc tccccgggcc ccccacgaca
     1381 gtcccttcag ataaaggagg tggctggggc ttgaaatctc agctcccacc accagtgcag
     1441 aatggtaaat tcccagcacc aaccccggcc attcagtggg gaccgaagcc tcagaaagca
     1501 ggttaccagc cctccgatgg ctatggagct ggagcacaac tgggcttcca tggtggcctc
     1561 aagctgcaga aagttggttt ccattatgga aatgcagctc tggaagctgg aattttgcca
     1621 gagattctgc agtcagggtt ccccacagcc aacggcttta gtaatggact cagggaggag
     1681 actcttctct accctaaagc gacagttcca acccttgaga gacatggtca ggctggggcc
     1741 ttccagccct ggggggctgg agtgaagcca gaatatggat atgcaggcct tgggatccag
     1801 acagggccct atgggcagct gaggccagag ctgcgtctgg agcatttggg ggatcctgaa
     1861 ctgaagacat ataccaagag cccattggga aatggttaca gaggacactg cccctctggg
     1921 gaatgctgaa tggaagcttc cctgcctacc ctgagggtct ctgcattaca gcctggctgg
     1981 agaagcacag caggaggatc ttctcaacac ttgcctaggc cactgccctg tccctgtctc
     2041 ctctgggctg aagtattaat aaaagctata tggttccccg tt
//
