LOCUS       XM_017595280            4190 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus GRAM domain containing 4 (Gramd4),
            transcript variant X2, mRNA.
ACCESSION   XM_017595280
VERSION     XM_017595280.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 18, 2024 this sequence was replaced by
            NM_001427302.1.
            
            On Jan 21, 2021 this sequence version replaced XM_017595280.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4190
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4190
                     /gene="Gramd4"
                     /note="GRAM domain containing 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 38
                     ESTs, 4 long SRA reads, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 201 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:315203"
                     /db_xref="RGD:1309983"
     CDS             177..2003
                     /gene="Gramd4"
                     /codon_start=1
                     /product="GRAM domain-containing protein 4 isoform X2"
                     /protein_id="XP_017450769.1"
                     /db_xref="GeneID:315203"
                     /db_xref="RGD:1309983"
                     /translation="MRVGPDHPAGEPPRHVQVRPRSAVLNMLRRLDRIRFRGHKREDF
                     LDLAESPNASDTECGDEIPLKTSRPSPRDSEELRDPAGPGTLIMAAGVQDFSRTEFDR
                     LNEIKGHLEIALLEKHFLQEELRKLREETNSEMLRQELDRERQRRIELEQKMQEVLKA
                     RSEEQPAQPQQPAKGQSQASNGTGTERRSQGLSSRVQKWFYERFGEYVEDFRFQPEEN
                     TVETEEPLSARRLTENMRRLKRGAKPVTNFVKNLSALSDWYSVYTSAIAFTVYMNAVW
                     HGWAIPMFLFLAILRLSLNYLIARGWRIQWSIVPEVSEAVEPAKEDLTVSEKFQLVLD
                     VAQKAQNLFGKMADILEKIKNLFMWVQPEITQKLYVALWAAFLASCFFPYRLVGLAVG
                     LYAGIKFFLIDFIFKRCPRLRAKYDTPYIIWRSLPTDPQLKERAGATVSRRLQTASSR
                     SYVSSAPAGLSKDEDAGRFHSTKKGNFHEIFNLTENERPLAVCENGWRCCLINRDRKM
                     PTDYIRNGVLYVTENYLCFESSKSGSSKRNKVIKLMDITDIQKYKVLSVLPGSGMGIA
                     VSTPSTQKPLVFGAMVHRDEAFETIFSQYVKITSAAASGGDS"
ORIGIN      
        1 cgcgcagact ccgcgcagca ggacgtgagc gcgcgacgcg gcgccgcctc cgcgctcgtg
       61 gccggcaccc gcggggccgc gtagtccccg ctccccggcg ccgctgggct cccgggaggg
      121 cggcaggtgc agcgcggccg ggtggccggc caagggggcg ccgcggcggc gggtggatga
      181 gagttggccc cgatcatccc gcaggggaac caccccgtca tgtgcaggtg aggccaagga
      241 gtgccgtgct gaacatgctc aggagactgg ataggatcag gttcagaggc cacaagagag
      301 aggacttcct tgatctcgcc gagtccccaa atgcctcgga caccgagtgt ggagacgaga
      361 tccccctgaa gacgtcacgg ccctcgcccc gggacagtga ggaactcagg gaccccgctg
      421 gtccagggac cctcatcatg gcggcaggcg tgcaggactt cagcaggacc gagttcgatc
      481 gactgaatga gatcaagggt cacctggaaa tcgccttact ggaaaagcac tttcttcagg
      541 aggagctccg gaagcttcga gaagagacca actcagagat gctgcggcag gagctggatc
      601 gggagcggca acgtcggatc gaactggaac agaaaatgca ggaggtgcta aaggccaggt
      661 cggaggagca gccagctcag cctcagcagc cggcaaaggg acagagccag gccagcaacg
      721 gtacaggcac agagcgccgc agccaggggc tgtcctcccg tgtacagaag tggttctacg
      781 agaggtttgg ggagtacgtg gaggacttcc gcttccagcc agaggagaac acagtagaga
      841 cggaggaacc cctcagtgcc cgcaggttaa ctgaaaatat gagaagattg aagcgcggtg
      901 ccaagcctgt cactaacttc gtgaagaact tgtctgcctt atctgactgg tactctgtct
      961 acacctctgc catcgccttc acggtataca tgaatgctgt atggcatggc tgggccattc
     1021 ccatgttcct gttcctagca attttgaggt tgtccctcaa ttacctcatc gccaggggct
     1081 ggaggataca atggagcatt gtgccagaag tgtctgaagc tgtggaacct gcgaaggaag
     1141 atctgaccgt gtccgagaag ttccagctgg tgctggatgt cgcccagaaa gcacagaatc
     1201 tctttggcaa gatggccgac attctggaaa agatcaagaa cttgttcatg tgggtgcaac
     1261 ctgagatcac gcagaagctg tatgtcgccc tgtgggccgc cttcctggct tcttgcttct
     1321 tcccctaccg cctggtgggg cttgctgttg gcctctatgc tggcatcaag tttttcttaa
     1381 ttgacttcat cttcaaacgc tgcccaagac ttcgagccaa gtacgacaca ccctatatca
     1441 tctggaggag cctgcccact gacccccagc tcaaggagcg tgctggtgcc accgtgtcac
     1501 gcaggctgca gacggcgtcg tcacggagct acgtctccag cgctccagcc gggctgagta
     1561 aggatgaaga cgccggtcgc tttcacagca ccaagaaggg aaacttccac gaaatcttta
     1621 acttgaccga aaacgaacgc ccactagcag tgtgtgagaa tggttggcgt tgctgcctca
     1681 ttaaccgaga ccggaagatg cccacggact acatcaggaa cggggttctg tatgtgacag
     1741 agaattacct gtgcttcgaa agctccaagt ctgggtcgtc aaagaggaac aaggtgatca
     1801 agctgatgga catcacagat atccagaagt acaaagtctt gtctgtcctc cctggctcgg
     1861 gcatgggaat tgctgtatct acaccatcaa ctcagaaacc cctggtattc ggcgccatgg
     1921 tgcacagaga cgaagccttt gagaccattt tcagccagta tgtgaaaatc acgtctgcag
     1981 cagcctctgg cggtgacagc tagtattgac actgagatgt tgctggaatc ttttccaacc
     2041 attggctaga ggagcaggcg tcctcaccat cctcggcaat aattctcccg gaccgtggcc
     2101 ggtcctattg gcctcgattc tgcagaccag aagggctgga actcatggag cggtgccggg
     2161 ctggcccgtg ctgagcgcgt gaagtacctt cgtgaccacc tgtggacaca ggtggttaac
     2221 gtcacctgtt tgaaggatgg cacacaagac actggacctc aggccctgct aagcacagct
     2281 cctcactctc ctttccggcc tgggtacaga cccagccgct gctgtcccga gaggctcctt
     2341 ggtcttataa cccctgttct ccagaggctt tttccaccaa agccatagct gggaatggtt
     2401 gtggcctctt cctgcagggg tggtaagaca gaaacggtgg ggagggccct ctccagtgac
     2461 gaaatggcta gtcatctcac ccagccctca gaccctcttt ccacattgga cctactgtgg
     2521 gcacttcgag gctttgggta gggcctctca gggcttggtg tttttggggt acctccccct
     2581 ccatttttca gtgtcactca tcatggcttg acactccagc caagaggcca ggccagtggt
     2641 tggtgtccgg cgagggtcca gaatggcgcg tcggcaaaag cacacctttt taacactttg
     2701 ctctttggaa ggtttggggg gggggacggg acattctcca ctctgctatt aagtggtcat
     2761 ctggctggcg tttggcctcc agactgcaac cactcggggt aacagggtgg gttcaaggaa
     2821 ctgtcctgag ggactgtcag ggagatttgg caagggccct gtgccacagg agacagctgt
     2881 gggcagagcc tagaggttgg gggcccgagt tgccctgcac ctctaacatc taacagtatt
     2941 ctctctttct gcactcccag caagggcaag gcagatccca ccctacccat gcttcctgcc
     3001 cagacaaagg tggaaacttc atgggtgggc gatcttgcag gcctcggccg ctgaagggga
     3061 caaccactat ccccacctgt ggattttcca ggtggaccac tctggctcct tcagcttgtc
     3121 ccgagtcctt caaatgtcac tgagattgct tttttgaaga aacagaagat tatatttttt
     3181 acagagagca agctgtcttt cttatttttg tatcattttt caaatgtaat ttttaccttt
     3241 gctccaacgc tcatttgccc acgtgggtgt gaggcccggt ggcttgggct catgacacct
     3301 cattcccagg gacttcaggc cacgcactgg gggtgggaag ggctcgccag gcaaccagat
     3361 caagcacaca cgccacgcca gacgtgcagc aaaggccaca cagctccagg tacatagacg
     3421 gaggattctg aacagggagg cgggaccctc ctccacccag gggcgtggct tgagcccctg
     3481 gattatgctc atgctatgaa gagcatggag cgagacaagg accaccccaa catgccagag
     3541 ggggggcgac atggcccatc tgtggggatg gcttcacagg tgatagccac acacagtggt
     3601 taacgcttta tggaccctgg cagtgcccgg gttagtgagc gctgccacct atcgtgccac
     3661 agagaggcct taggctgtgg aggctttcgg ggtggagtaa gtggtttagt ttgagtctct
     3721 ttctctggga aagagagatg aagactgacc ataggccagg gcagtgggtc agggaggtga
     3781 cggtggcagc cccaagttcc actgttagtt ccaccattgg ccaccagcag gtctttgggt
     3841 ggagctcagg gggacagggc tgggccaggg gcctaggcag cctctagtca tagttacaga
     3901 gacactgggg tttgtactga actgtgtgat ctgggcaggt gtttaattgc tgactaatca
     3961 ctgacctaga atgttcaatt ctgtgtgtgt aaagcttgag tctgtttggg atctgtaaat
     4021 aattgtcact ggtgtaactt ttgttctaca aaaggatcat attctataaa gaactgaaga
     4081 taggaaaaaa ttcctctgtc actttttttt aaaaagaaac ccttgtttag atacaaagtc
     4141 ttgtataaat tataattttt atttaataaa cctaaaatgc tctgtgctga
//
