LOCUS       NM_001399257            3258 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus GRAM domain containing 2A (Gramd2a), mRNA.
ACCESSION   NM_001399257 XM_039082425
VERSION     NM_001399257.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3258)
  AUTHORS   Besprozvannaya,M., Dickson,E., Li,H., Ginburg,K.S., Bers,D.M.,
            Auwerx,J. and Nunnari,J.
  TITLE     GRAM domain proteins specialize functionally distinct ER-PM contact
            sites in human cells
  JOURNAL   Elife 7, e31019 (2018)
   PUBMED   29469807
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Jan 5, 2022 this sequence version replaced XM_039082425.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN09345329,
                              SAMN11044071 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-125               JAXUCZ010000008.1  68988459-68988583
            126-218             JAXUCZ010000008.1  69004026-69004118
            219-276             JAXUCZ010000008.1  69005369-69005426
            277-352             JAXUCZ010000008.1  69005755-69005830
            353-456             JAXUCZ010000008.1  69006385-69006488
            457-555             JAXUCZ010000008.1  69007071-69007169
            556-627             JAXUCZ010000008.1  69007448-69007519
            628-690             JAXUCZ010000008.1  69008128-69008190
            691-835             JAXUCZ010000008.1  69009508-69009652
            836-932             JAXUCZ010000008.1  69009900-69009996
            933-1037            JAXUCZ010000008.1  69011098-69011202
            1038-3258           JAXUCZ010000008.1  69011355-69013575
FEATURES             Location/Qualifiers
     source          1..3258
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..3258
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /note="GRAM domain containing 2A"
                     /db_xref="GeneID:300761"
                     /db_xref="RGD:1564007"
     exon            1..125
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     exon            126..218
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     CDS             136..1041
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /note="GRAM domain-containing protein 2; GRAM domain
                     containing 2"
                     /codon_start=1
                     /product="GRAM domain-containing protein 2A"
                     /protein_id="NP_001386186.1"
                     /db_xref="GeneID:300761"
                     /db_xref="RGD:1564007"
                     /translation="MHGKMVPLKNHVSCMEKPGKVQEPPDSSLHWSEGSKGEEIKKYG
                     REGTLLNKYNQQYHKLFKDIPLEEMVVKVCSCALQRDLLLHGRLYISPNWLCFHASLF
                     GKDIKVVIPVASVQLIKKHKMARLLPNGLAITTNTSQKYVFVSLLSRDSVYDMLRRVC
                     THLQPSSKKSLSIRKFPEEEELESPEVLIPEMKWRKACSASPSLSLPDNISCVSRIPT
                     DSADSCFSSMKPLGSEAVCEKDALEEEPTTDQELRLWDSRLLKVIFVMICFLVLSSSY
                     LAFRIARLEQQLCSLNWGSPLPRDR"
     exon            219..276
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     exon            277..352
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     exon            353..456
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     exon            457..555
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     exon            556..627
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     exon            628..690
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     exon            691..835
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     exon            836..932
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     exon            933..1037
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
     exon            1038..3258
                     /gene="Gramd2a"
                     /gene_synonym="Gramd2; RGD1564007"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tggtactgga attctgggtg tggctgccac cagggatcga gggaccttgg tcttcccggt
       61 cctttccagg gaaggtttag caaagaaact gtggttggtg cgtccttggg gtggaggagc
      121 tgcagcaacc aacaaatgca tgggaagatg gtgcctctga agaaccatgt gtcctgcatg
      181 gagaaaccag gaaaggtcca ggagccccca gatagcagtc tgcactggtc agaaggctca
      241 aagggtgaag agataaagaa gtatggccgg gaagggacac tactaaacaa atacaaccaa
      301 caataccaca agctgtttaa agatatcccc ttggaggaga tggttgtcaa agtgtgttcc
      361 tgtgccctcc agagagacct ccttctccat ggtcggctgt atatttcgcc caactggctt
      421 tgcttccatg ccagcctctt tggcaaggat atcaaggtgg tcattcctgt ggcatctgtg
      481 caattgatca aaaagcacaa gatggcacgg cttcttccca atggactggc catcaccaca
      541 aacaccagcc agaagtatgt gtttgtgtct ctgctttccc gggacagcgt atatgacatg
      601 ctgaggaggg tctgcactca cctacagcct tccagcaaga agagtctgag tatacggaaa
      661 tttccggaag aagaggaact cgagtccccg gaagtcctca tccctgagat gaagtggaga
      721 aaagcgtgct cagcctcccc atccctgtca ctcccggaca acatctcttg tgtctctcgg
      781 atacccacag actccgctga tagctgcttt tcctccatga agcctctagg gtctgaggcc
      841 gtctgtgaga aagatgcatt ggaggaagag cccaccacgg accaggagtt gaggctgtgg
      901 gattcccggc tcctcaaggt catctttgtg atgatctgct ttctagtcct gtcctcgtcc
      961 tatctggcat tccgaatcgc ccggctggag cagcagttat gttccctgaa ctggggcagt
     1021 ccactcccaa gggacaggta acagccattt ggtcttcatc tgcacacctt aaccaaggat
     1081 gctctgggtg ctgtctctac caaggattcc tgggtctata ctgcagctgt gctgggactg
     1141 agtatgaaga acatattcta gatccttcct ccagacccct cccccaacac ttccctcagt
     1201 gagcgatctg aagtacttgt ttacagattc actggctcct ataatttttg gactcaaaca
     1261 aaatgttaga ctgtttttgt attttaatca gttgatgagt tctgtacact aagcttcagc
     1321 gacacttacc ttgttttatt gtaagcaatg gttctggcac actacagagc cctaggggcc
     1381 acctccgggg atgaagggct ttgatacctg gattgctgtc acatgacaca ttctagtgag
     1441 tgtagggagt ggagtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     1501 tgtgtgtgct ggagaaataa cggaggcaca aaccgctgtg tgggctctgc tgcatcccta
     1561 ccagcgttct gtgatctcac tcagatctct cagaatcttt gttctggagc ccacaggact
     1621 ttccttcagg gagcactggg gcctttggga agattgggat atggagaaga gagcagggct
     1681 tatcaagaga ccaatcttag tgttctgagc tgagctgggt gactctgggc tgcccagagc
     1741 tgtctagctg aatttgggaa gatgccacct gcaggagagg aagggtgtgg ggctgagatt
     1801 ggaggtccca gaactcccat tctggagcag tctcctcctt ggtaggacaa ggggaaccgg
     1861 tacttgggta tttggtggta ggtctattcc tattggtcac agacattccc aaggtcctag
     1921 acattagcaa taggaaggca gggaatttta tttaaggtct agtggctggt atacctcctg
     1981 catggccacc tgcacttgtc ggggtggttt gactgggcag tgagatccag ctgcaacggt
     2041 ggccttcttg gcagagctca ctcatgccat ggacctgcag tccatgtgct ctaggacatt
     2101 ccataggact ccagtgatca taagtaagga caggctccgt gcagagacca ggtgaggaga
     2161 tctctgactc ccttgctggg agaggatggg tagatggtga gattggtgca cactgagggt
     2221 tttgccatag agaatcttcc ccatctactt ttttcctaaa aagaactctt gttcatctcc
     2281 tcaggactct catctgctaa gacagtggct ttgaaggttc tagaagggtc ttagggagga
     2341 agcccgcggt attaaggaaa ggtacaggtg gtgggaggag tggtaatggg aatagccact
     2401 gttccccctt tctcttgtgc tgtcaagtta actgggggag gaaaccctgg tggaaatgat
     2461 tgcagggctg tggttgtctc attcaggaca aatcccagca ggactggaga aagggacagt
     2521 gggtgacaac ttcctgagct tagactggag ggctctccat catctcccta ttctggttcc
     2581 taggattgaa catggagccc agccttgtat gctgtttgta ccaaatcttt acatctcagg
     2641 tgaagcccgg tgtccatttg gtcctccttc cagggccaca ctgtcagatg cccatcctcc
     2701 agtgcccatc catccttttg tctttcccat catataacag aaacaatcct ccttgcccca
     2761 gtgctttccc tctctggtcc ttgctgagac gtgagagtac ggatccattc tctgagcctt
     2821 gctaggttga gccagggttc atgagaggtg ccaagtcaca aggctgtgcc aacatgctct
     2881 ggaaagccca ttctccaacc atggctgaga ggacaggagg cgggctgtag ggcagctagc
     2941 tgactttgga ggtagacttg aggccagagc tttgagtgat atgggtgtgt ccatgcctct
     3001 gaagggtcct ctctctgctt ctccccgtgg ttgcccgtcc tgctcctctg gaggagctgt
     3061 gtgacagttg tgatcattca tgatctgtgg gcatttatac attcctgatt acactggcta
     3121 atgcccctcc ggttctccga gggtttggtt caacaagagt gggctgttcc accgtggcat
     3181 cagcctttga aaaacaggtt aattcccagg tactgaaaaa atatttttta aaaaataaaa
     3241 acctcaattt ttctagtg
//
