LOCUS       NM_001398918            3147 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus GPRIN family member 3 (Gprin3), transcript
            variant 1, mRNA.
ACCESSION   NM_001398918 XM_006236589
VERSION     NM_001398918.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3147)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Dec 28, 2021 this sequence version replaced XM_006236589.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643285.16383.1,
                                           SRR26360190.2648047.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-147               JAXUCZ010000004.1  89987350-89987496   c
            148-3147            JAXUCZ010000004.1  89902198-89905197   c
FEATURES             Location/Qualifiers
     source          1..3147
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q24"
     gene            1..3147
                     /gene="Gprin3"
                     /gene_synonym="RGD1565690"
                     /note="GPRIN family member 3"
                     /db_xref="GeneID:502784"
                     /db_xref="RGD:1565690"
     exon            1..147
                     /gene="Gprin3"
                     /gene_synonym="RGD1565690"
                     /inference="alignment:Splign:2.1.0"
     exon            148..3147
                     /gene="Gprin3"
                     /gene_synonym="RGD1565690"
                     /inference="alignment:Splign:2.1.0"
     CDS             256..2544
                     /gene="Gprin3"
                     /gene_synonym="RGD1565690"
                     /codon_start=1
                     /product="G protein-regulated inducer of neurite outgrowth
                     3"
                     /protein_id="NP_001385847.1"
                     /db_xref="GeneID:502784"
                     /db_xref="RGD:1565690"
                     /translation="MGTVPDPLRVTKASIVAASRKEESPGELQSVSPQPAQPDKNVSG
                     IGNAPAELSLRLSSAAPALMQACVHESSPQDMTSPGMLNEVEQVSPKNNTPDDSQPQG
                     SKESAAPDANATAKKELTSAPFLMSAVQHMHHAIRNDPPNTSTCPVPEDSLVKSEANS
                     DREKPEKSSCPTRVTCCSSKNKVFCDFPSPENSQGIVQTPDRAVRIHSSPSADRPEGE
                     EQKAINSTTVVSSEPLARGECSENRQPSDTVLDTTDEKSENPPLSPLTSREATCSSEA
                     RQVQLPTQHPTSRFKEASTMTCQAESEAKEVPGRAWQDAEVQAVASVESRSVSTSPSI
                     LPAFLKENPALEQENGQEQLRVICHDKGSGSRLLELSNSMVDPQESRQCPSIVPQVHI
                     QAPVATSTAFKGGCKPANQPAEGLKSPLVHVASSQTPDTEEDLRSSTSKEATSRELTG
                     TNLGSQKATTIAQISVLAGSQAEISLGLGNSGLRAPELVEKIANDHKTEPDCKLSNSR
                     GGVNEDQPLESLDPTDKRDAKDKNPASPLIVKDHAPGATSTPDAKTLLLNPKSHGSEG
                     PEVSPAPSPGRKSTVEEHRQTKTVTSLSLPSDGTGDSSPGSGKRTPSRSVKASPRRAS
                     RVSEFLKELNVTAAAAQVGLTPGEKKKQLGAESKLQLKQSKRVRDVVWDDQGMTWEVY
                     GASLDPESLGVAIQNHLQRQIREHEKLVKTQSGQTRRSISSDSSSSKKLKGRQQGVLQ
                     SMLQNFRRPNCCVRPAPSSVLD"
ORIGIN      
        1 agttcctgat cgctcagagc tggctcctgg ctgcagcgga ccgctcgaat cccccagcag
       61 tggtgtggag gagccggggc tgggtagcga ctggaagccc agcaaagcac agacagcggc
      121 ccagcggggg acactccgtg ggagcaggcc agttcttcag aagactcatc cctatgtctt
      181 ccctctgatt ccgactactt cccagtggaa aacatacttg gaacagacac tggggtgctc
      241 ttggagagag atcccatggg gactgtacct gaccctctga gggtgactaa agcttcgata
      301 gtggcagctt ctaggaagga agagtctcca ggggagctgc agagtgtctc accacaacca
      361 gctcagccag acaagaatgt tagtggcatt ggcaatgctc ctgcagaact cagcctcagg
      421 ctcagttcag ctgctccggc cctgatgcaa gcatgtgtgc atgagtccag cccacaagac
      481 atgacatctc ctggcatgct caatgaggtg gagcaagtgt ctcccaagaa caacactcct
      541 gatgactccc agcctcaagg aagcaaggag tcagcagcac cagacgcaaa tgctactgca
      601 aaaaaggaac ttacatctgc accattttta atgtctgcag tccagcacat gcaccatgct
      661 atccggaacg acccaccaaa tactagcacc tgtccagtac ctgaagattc cttggtgaaa
      721 tcagaggcaa actcagaccg tgagaaacct gaaaagtcaa gttgccctac cagggtcacc
      781 tgttgcagca gcaaaaacaa agtgttctgt gattttcctt ctccagaaaa cagccaggga
      841 attgtgcaga ctccagatag ggcagtgagg attcactcat ccccttctgc agacagacct
      901 gagggggaag agcagaaagc catcaatagc accacagtgg tatccagtga acctctagca
      961 agaggggaat gctcagagaa cagacagccc tctgacactg tcttggacac cacagatgaa
     1021 aagtcagaaa accctccact atcccccctt accagcagag aggccacatg ttcttcagag
     1081 gcaagacaag tacagctgcc aacacagcat cccacatcaa ggttcaaaga agccagtaca
     1141 atgacctgcc aagctgaaag cgaggctaag gaggttcctg gcagggcttg gcaagatgct
     1201 gaggtacagg cagtagcaag tgtggagagc aggtctgtct ctaccagccc cagtatcctc
     1261 cctgcatttt taaaggaaaa ccctgctctt gagcaggaga atggtcaaga gcagctgcgg
     1321 gtcatttgcc atgacaaggg cagtggaagc cgcttgttgg aactctctaa cagcatggta
     1381 gacccccagg agtcaaggca gtgccccagc attgtaccgc aggtacatat ccaggcccct
     1441 gttgccactt ctacagcttt caaagggggg tgcaaaccag ctaaccagcc agctgaaggc
     1501 cttaagtctc cactggtcca tgtggcttcc agtcaaactc cggatacaga ggaagacctg
     1561 cgatcttcaa caagcaaaga ggcaacctcc agggagctta caggtactaa tcttggctcc
     1621 cagaaagcta ccaccattgc acaaatctct gtcctagcag ggagtcaagc tgagataagt
     1681 cttggattgg ggaactctgg actcagggca cctgaacttg tagagaaaat tgcaaatgac
     1741 cacaaaacag agccagactg caaactgtcc aactcccgtg gaggtgtaaa tgaagaccaa
     1801 cccctggaga gcttggaccc cactgataaa agagatgcaa aggacaaaaa tcctgcttct
     1861 cctcttatcg tgaaagacca tgcacctgga gccaccagca ccccagatgc caaaacccta
     1921 ctactaaatc ctaaatctca tggaagtgag ggaccagagg tcagtcctgc accgtcccca
     1981 gggaggaaga gcactgtgga agaacacagg cagaccaaga cagtcacgag cctaagcttg
     2041 ccatcagacg gcacaggaga ctcgagccca ggttctggta agaggacccc ttctcgctca
     2101 gtcaaggcca gccctcgaag ggccagccgg gtcagcgagt tcctgaagga gctcaatgtg
     2161 acagcagctg ctgcccaggt ggggcttaca cctggagaga agaagaaaca gctgggtgca
     2221 gagtccaagc tgcagctgaa acaatctaag cgagtgaggg acgtggtgtg ggatgaccag
     2281 ggcatgacct gggaagtgta tggtgcttcc ttggacccag agtccctggg agttgccatc
     2341 cagaaccatt tacaaagaca aattagggaa catgagaaat tagttaaaac acaaagtggc
     2401 cagactcgaa gatctatttc ctcagattct tcttcaagta agaagcttaa agggagacaa
     2461 cagggcgttc tgcagtctat gctgcaaaac ttccggcgcc ccaactgctg tgtccgtcct
     2521 gctccgtcct cagtgctgga ctaaaaggga actgcactgt tgtatgagct gtggtattcc
     2581 ttgtgtctgt tcgtgtcgaa gcttagaagt ttggatttct gagtttgttt tttgttttgt
     2641 tttgttttgg gggcgggtga ttgttgttgt ttcctacgag acttaggagt aaaagcaact
     2701 attacgttta agaattagct attacagatt gttgggtcct ccataaataa aatgctgttt
     2761 cacgctgaga gaaagaatac tataagtgaa acgaagcttg cagagagtct gcatcccgag
     2821 ttcagaagaa acggtcgtga ctgcgctatt tttaatacat tattattatt tatacacaca
     2881 tttttattac acacaagtca tttggtattt tcaccccagt ctatcacagg gtggcatttc
     2941 cactaaaata cctgctttac attgaaacta gcagaaacaa ctattagcaa cactgtgtaa
     3001 gttggtattg ctgaggtaag gatgctagta ccacaagagg atgctagtac tgcaaaggtt
     3061 taagtagctt ataagaagct taatgtgaaa acttgaaaaa aaattgtata ttattcctgg
     3121 gacaaataag atgaaatgaa aatattc
//
