LOCUS       NM_001401158            3956 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus G protein-coupled receptor associated sorting
            protein 2 (Gprasp2), transcript variant 2, mRNA.
ACCESSION   NM_001401158
VERSION     NM_001401158.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3956)
  AUTHORS   Beausoleil,S.A., Jedrychowski,M., Schwartz,D., Elias,J.E.,
            Villen,J., Li,J., Cohn,M.A., Cantley,L.C. and Gygi,S.P.
  TITLE     Large-scale characterization of HeLa cell nuclear phosphoproteins
  JOURNAL   Proc Natl Acad Sci U S A 101 (33), 12130-12135 (2004)
   PUBMED   15302935
REFERENCE   2  (bases 1 to 3956)
  AUTHORS   Simonin,F., Karcher,P., Boeuf,J.J., Matifas,A. and Kieffer,B.L.
  TITLE     Identification of a novel family of G protein-coupled receptor
            associated sorting proteins
  JOURNAL   J Neurochem 89 (3), 766-775 (2004)
   PUBMED   15086532
REFERENCE   3  (bases 1 to 3956)
  AUTHORS   Yehiely,F., Bamborough,P., Da Costa,M., Perry,B.J., Thinakaran,G.,
            Cohen,F.E., Carlson,G.A. and Prusiner,S.B.
  TITLE     Identification of candidate proteins binding to prion protein
  JOURNAL   Neurobiol Dis 3 (4), 339-355 (1997)
   PUBMED   9173930
  REMARK    Erratum:[Neurobiol Dis 2002 Jun;10(1):67-8]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.32587.1,
                                           SRR26360172.1961728.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-200               JAXUCZ010000021.1  103609304-103609503
            201-293             JAXUCZ010000021.1  103610014-103610106
            294-400             JAXUCZ010000021.1  103610623-103610729
            401-476             JAXUCZ010000021.1  103610846-103610921
            477-547             JAXUCZ010000021.1  103611068-103611138
            548-624             JAXUCZ010000021.1  103611300-103611376
            625-695             JAXUCZ010000021.1  103611534-103611604
            696-777             JAXUCZ010000021.1  103611921-103612002
            778-3956            JAXUCZ010000021.1  103612272-103615450
FEATURES             Location/Qualifiers
     source          1..3956
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..3956
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /note="G protein-coupled receptor associated sorting
                     protein 2"
                     /db_xref="GeneID:317405"
                     /db_xref="RGD:1561019"
     exon            1..200
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /inference="alignment:Splign:2.1.0"
     exon            201..293
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /inference="alignment:Splign:2.1.0"
     exon            294..400
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /inference="alignment:Splign:2.1.0"
     exon            401..476
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /inference="alignment:Splign:2.1.0"
     exon            477..547
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /inference="alignment:Splign:2.1.0"
     exon            548..624
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /inference="alignment:Splign:2.1.0"
     exon            625..695
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /inference="alignment:Splign:2.1.0"
     exon            696..777
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /inference="alignment:Splign:2.1.0"
     exon            778..3956
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /inference="alignment:Splign:2.1.0"
     CDS             1093..3603
                     /gene="Gprasp2"
                     /gene_synonym="RGD1561019"
                     /codon_start=1
                     /product="G-protein coupled receptor-associated sorting
                     protein 2"
                     /protein_id="NP_001388087.1"
                     /db_xref="GeneID:317405"
                     /db_xref="RGD:1561019"
                     /translation="MTGAEVETGSQAKSDKKPQEEVVVDGVERESEVPLVVRPKVRPQ
                     APATSGARPKTETKSSSRARPKTESQSVSGRRPKTEAQSMTGARPRLEAQVMSGARPK
                     TDARAVGGARPKTEAKPIPGARPKNDSRAWAQSEFGAEAMSHAERAPLPNAVTWPLVN
                     SESTSVTKSKSLSMDREMANMGSETFPSTQGQSGIEPWFGPREEANMGSWCYPRPRAR
                     EETSNESGFWSADETSTMSSLWTGQETNIRSWPREEVNTRSRHRAKHQANTRSKPRSK
                     QDAYIDSLSGSEDEAGNPFCFWAGENANDMFRPRGRDEANVRPKIRTKRENYFEDEEE
                     FCKESWLLPGEEANRFRGRDKEEPNKTLKNSDQKDVKNDEKVKQESKIEEEVIIGSWF
                     WAEQETSLEAAASAICESEPGAEEGAIGGSLFWTEEKPDLGAVARDEVRPESEEEAIF
                     GSWFWDRDEACFDPNPTPVYTAKSRYRDPEEDLNLASRPKSWDEVTIEFTPPCHGVGF
                     PFPRPFIIPEGASGNTEEKAKSAELGAEGEEQESVVQRDPPEPDFPFQYDPSYRSVRE
                     IREHLKARESAQPENWSCNCIQCELRIGSAEFEELLLLMDRIRDPFIHEISKIAMGMR
                     GASQFTRDFIRNSGVVSLIEALMNYPSSRARTAFLENMIEMAPPYPDLNMIETFICQV
                     CEETLSHSVNSPEQLTGMRMLRHLTITTDYHTLIANYISGFLALLTTGDARTKFHVLK
                     MLLNLSDNPMVAKKLFSAKALSIFVGLFNIEETNDNIQIVIKMFQNISNIVKSGAMSL
                     IDDDFSLEPLVSAFHEFEELAKQLQIQIDNQNEPEEGQ"
ORIGIN      
        1 caggagagct gtgcttgccg catcctgcgc agcccctgcc cgtttggtgc agaggcgtga
       61 ggactggacg ggtttctgcc attccactcg cgctcaaagc agtgaaaggc cagtgaaagg
      121 atctacggag gacagagaac atccgggagc aggagaggga cgtggggaag cccggggacc
      181 tgggccttgc ccctggccag gtctggcata ttctggcagg ccacagtgag tgagcatctg
      241 tacaccagag gcttgagaaa agaggaacag gaaaacggcg tggatttctg gagccctgct
      301 ttaaggctgc aagcaaggaa agaaggcttc taggcgactg tctcagatct ctggaggttg
      361 gtgagactca ggggcagtgc aggagccagc cactgaggag gtctgcttta aggctggttt
      421 ttctgcaatc aaggaaagaa ggcttctagg cgactgtctc agatctctgg aagttggtct
      481 gctttaaggc tggtcagttc ttcaatcaag aaaaaaggct tcagggtgac tgtctcagat
      541 cttggaggtc tgctttaagg ctggtcagtt cttcaatcaa ggaaagaagg tttcaaggca
      601 actgtctcag atctctggaa gttggtctgc cctaaggctg gtttttctgc aagcaaggaa
      661 agaaggcttc agggcgactg tctcagatct tggaggactc cctgcagtca gccagctgtt
      721 tgtcttaaca ctgcttgaac acagaagaga ggggagaact gcaccacatc tgtgaagatc
      781 acctgcagtg gccgcttggt ggtgctgagg ttgccgctga ccagtgcaat caacaggtct
      841 gcacccacct aggacctgtt cgtcgtcctc cagcttgatt tcacctcttc tgcactgtat
      901 ctgtgttatt gactgagact gcttgggtag gagtctcact ggtgccggat tggttggtca
      961 tttacccctg ttcttcacta tatctcttga gtaatcaaaa gatcagagtg ggaagatata
     1021 atactgtgac agatctgttg ttgagactga ggctttggta ggcattccta attgaacctt
     1081 gcaacttgta ccatgaccgg ggcagaagtt gagactggtt ctcaggccaa gtctgataag
     1141 aagcctcagg aagaggttgt ggtggatggg gttgagagag aaagtgaagt ccctctggtg
     1201 gtcagaccca aagtcaggcc tcaggctcca gcaacaagtg gtgctaggcc caaaactgaa
     1261 actaaatctt cctctcgggc aaggcctaaa actgaatccc agtcagtgtc tggaagaagg
     1321 cctaaaactg aggctcagtc aatgactgga gcaaggccga gattggaggc ccaagtaatg
     1381 tctggtgcca ggcctaaaac tgatgcgagg gcagtaggtg gtgcccgccc taagactgag
     1441 gccaagccaa tcccaggagc aaggcctaag aatgattccc gggcttgggc ccagagtgag
     1501 tttggagctg aggcaatgtc acatgctgag agagcaccct tacctaatgc cgtcacatgg
     1561 ccattggtca attccgagtc tacaagtgtt acgaagtcta agagtctgtc tatggataga
     1621 gaaatggcca atatgggtag tgaaactttt cctagcaccc aaggtcagag tggaatcgag
     1681 ccctggtttg gaccaagaga agaggctaat atgggttctt ggtgctatcc caggcccaga
     1741 gccagagagg agacctctaa tgagtctgga ttctggtcag cagatgaaac ttctacaatg
     1801 tcttctttgt ggactgggca ggagactaat atcagatcat ggcccaggga agaagtgaac
     1861 actaggtcca gacacagggc taaacatcag gctaacacca ggtccaagcc caggtccaaa
     1921 caagatgcct atattgattc tttgtctggg tctgaggatg aggcaggtaa cccgttttgc
     1981 ttttgggctg gagaaaatgc taatgacatg tttaggccca gaggcaggga tgaggcaaat
     2041 gttagaccaa agatcaggac aaagagagag aactattttg aagatgaaga ggagttctgt
     2101 aaagagtcct ggcttttgcc tggggaagag gctaacagat ttaggggccg agacaaggaa
     2161 gagcctaata agaccttgaa aaacagtgac caaaaagatg ttaaaaatga tgaaaaggtc
     2221 aaacaagagt ccaagattga ggaggaagtc attattgggt cctggttctg ggcagaacaa
     2281 gagactagtt tggaggctgc agcttcagca atctgtgaat ccgaaccagg ggctgaggag
     2341 ggagccattg gtggatccct gttctggacc gaagaaaagc ccgatttggg ggctgtagcc
     2401 agagatgagg tcaggcctga gtctgaagaa gaggccatat ttgggtcatg gttttgggat
     2461 agggatgagg cctgctttga cccaaatccc actcctgtgt acacagctaa gagcaggtac
     2521 cgagatccag aagaggatct taatttagcg tccaggccca aatcctggga tgaggtcacc
     2581 attgaattta cacctccttg ccatggcgtt ggctttcctt tcccaagacc ctttataatt
     2641 cctgaagggg cttctggaaa tactgaggaa aaagccaaga gtgcagagct tggcgcagag
     2701 ggggaggagc aggaatctgt ggttcagcgt gatcctcctg aacccgactt cccatttcag
     2761 tatgatcctt cttaccggtc agtccgggaa attcgggagc atcttaaggc cagggagagt
     2821 gcacagcctg agaactggtc ttgcaactgc atccagtgtg agcttagaat tgggtctgcg
     2881 gagtttgagg aacttctttt actgatggac agaattcgtg atccatttat ccatgagata
     2941 tctaaaattg caatgggcat gagaggtgct tctcagttca cccgagattt cattcgaaac
     3001 tcgggtgttg tctcacttat tgaagccctg atgaattatc cttcctcccg agcgaggact
     3061 gcctttttgg aaaacatgat tgaaatggct ccaccttacc cagacctaaa catgatcgag
     3121 acatttattt gtcaggtgtg tgaggaaaca ctttctcata gtgtgaattc ccctgagcag
     3181 ctcactggca tgaggatgct cagacatctc actataacta ctgactatca cacactgatt
     3241 gccaattaca tctccgggtt tctcgcctta ttaaccacag gcgatgcaag aaccaagttt
     3301 catgttctga aaatgctgtt gaacttgtct gacaatccca tggtggccaa aaagctattc
     3361 agtgccaaag ctctgtcaat attcgtgggt ctctttaata tagaggagac aaatgataac
     3421 attcagattg ttatcaaaat gtttcagaac atcagtaaca ttgtaaaaag tggagcgatg
     3481 tctttaatcg atgatgattt cagtcttgag ccacttgttt ctgcattcca tgaatttgaa
     3541 gagctagcaa agcagctgca gatccaaata gacaatcaaa atgagcccga ggagggacag
     3601 taaagttagt gtgattaacc acctgccact catcagcctt atgttcccaa agagccctaa
     3661 atagtgcttt ggtgttcaca gtcttgtttc tgtgttgtaa cttatatttt taatgctaat
     3721 gttaacttgt caaactcttg ttgtgagctg gatcatttgt ggatgccaaa aatgaatatc
     3781 agaactgaaa acacatttgt tgatatttgt cttaccgtcc agattgtgat attttttagt
     3841 gttgagctcc cagtgaacca agtcacatga gtaagctatc ctgctatttg tcacttaaac
     3901 atgtggttct ctgcttgagt ctgtgttttc aataaagttc gatgttaaaa ttggca
//
