LOCUS       NM_080411               3646 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus G protein-coupled receptor 83 (Gpr83), mRNA.
ACCESSION   NM_080411 XM_346815
VERSION     NM_080411.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3646)
  AUTHORS   Badgandi,H.B., Hwang,S.H., Shimada,I.S., Loriot,E. and
            Mukhopadhyay,S.
  TITLE     Tubby family proteins are adapters for ciliary trafficking of
            integral membrane proteins
  JOURNAL   J Cell Biol 216 (3), 743-760 (2017)
   PUBMED   28154160
REFERENCE   2  (bases 1 to 3646)
  AUTHORS   Loktev,A.V. and Jackson,P.K.
  TITLE     Neuropeptide Y family receptors traffic via the Bardet-Biedl
            syndrome pathway to signal in neuronal primary cilia
  JOURNAL   Cell Rep 5 (5), 1316-1329 (2013)
   PUBMED   24316073
REFERENCE   3  (bases 1 to 3646)
  AUTHORS   Espey,L.L. and Richards,J.S.
  TITLE     Temporal and spatial patterns of ovarian gene transcription
            following an ovulatory dose of gonadotropin in the rat
  JOURNAL   Biol Reprod 67 (6), 1662-1670 (2002)
   PUBMED   12444039
  REMARK    Review article
REFERENCE   4  (bases 1 to 3646)
  AUTHORS   Wang,D., Herman,J.P., Pritchard,L.M., Spitzer,R.H., Ahlbrand,R.L.,
            Kramer,G.L., Petty,F., Sallee,F.R. and Richtand,N.M.
  TITLE     Cloning, expression, and regulation of a glucocorticoid-induced
            receptor in rat brain: effect of repetitive amphetamine
  JOURNAL   J Neurosci 21 (22), 9027-9035 (2001)
   PUBMED   11698613
REFERENCE   5  (bases 1 to 3646)
  AUTHORS   Harrigan,M.T., Campbell,N.F. and Bourgeois,S.
  TITLE     Identification of a gene induced by glucocorticoids in murine
            T-cells: a potential G protein-coupled receptor
  JOURNAL   Mol Endocrinol 5 (9), 1331-1338 (1991)
   PUBMED   1663214
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Nov 26, 2020 this sequence version replaced NM_080411.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY029071.1, SRR26360176.1062494.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMN09345330
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-690               JAXUCZ010000008.1  19974995-19975684
            691-816             JAXUCZ010000008.1  19979302-19979427
            817-950             JAXUCZ010000008.1  19981392-19981525
            951-3646            JAXUCZ010000008.1  19982788-19985483
FEATURES             Location/Qualifiers
     source          1..3646
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q12"
     gene            1..3646
                     /gene="Gpr83"
                     /gene_synonym="Gir"
                     /note="G protein-coupled receptor 83"
                     /db_xref="GeneID:140595"
                     /db_xref="RGD:619891"
     exon            1..690
                     /gene="Gpr83"
                     /gene_synonym="Gir"
                     /inference="alignment:Splign:2.1.0"
     CDS             307..1575
                     /gene="Gpr83"
                     /gene_synonym="Gir"
                     /note="probable G-protein coupled receptor 83;
                     glucocorticoid-induced receptor"
                     /codon_start=1
                     /product="G-protein coupled receptor 83 precursor"
                     /protein_id="NP_536336.1"
                     /db_xref="GeneID:140595"
                     /db_xref="RGD:619891"
                     /translation="MNVPPVLLLFLLSSVRATEQPQVVTEHPSMDAALTGANASHFWA
                     NYTFSDWQNFVGRRRYGAESQNPTVKALLIVAYSFIIVFSLFGNVLVCHVIFKNQRMH
                     SATSLFIVNLAVADIMITLLNTPFTLVRFVNSTWVFGKGMCHVSRFAQYCSLHVSALT
                     LTAIAVDRHQVIMHPLKPRISITKGVIYIAVIWVMATFFSLPHAICQKLFTFKYSEDI
                     VRSLCLPDFPEPADLFWKYLDLATFILLYLLPLFIISVAYARVAKKLWLCNTIGDVTT
                     EQYLALRRKKKTTVKMLVLVVVLFALCWFPLNCYVLLLSSKAIHTNNALYFAFHWFAM
                     SSTCYNPFIYCWLNENFRVELKALLSMCQRPSKPQEDRLPSPVPSFRVAWTEKSHGRR
                     ALLANHHLPSSQIQSGKTDLSSVEPTVAVS"
     exon            691..816
                     /gene="Gpr83"
                     /gene_synonym="Gir"
                     /inference="alignment:Splign:2.1.0"
     exon            817..950
                     /gene="Gpr83"
                     /gene_synonym="Gir"
                     /inference="alignment:Splign:2.1.0"
     exon            951..3646
                     /gene="Gpr83"
                     /gene_synonym="Gir"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 accgaggacc gaggtgggtg acagtccgca caatccctag gttccctagg atccctaggt
       61 tttccggagt tctccctgcg gtccggaccc tcctgaggat ctcggttgtc tccccatcca
      121 ggacctggcg tccccaggtt ctctcggagg tcggggctcc ctctatgctt cgcgcccctc
      181 gagtccaggt tccctctgtg gtgcggactc ctctagcccg gtgcgctcag cgccccgcac
      241 ccagtctcct catacggagc ctggcgggga gtccggacct tgtgcccaga gctgcagtgg
      301 ttggacatga atgtccctcc tgtcctgctt ctttttcttc tgtcctccgt gagagccact
      361 gagcagccgc aggtcgtcac tgagcatccc agcatggatg cagccctgac cggagccaat
      421 gcctcgcact tctgggccaa ctacactttc tctgactggc agaacttcgt gggcaggaga
      481 cgctatgggg ctgagtccca gaaccccaca gtgaaagccc tgctcatcgt ggcctactcc
      541 ttcatcattg tcttctcgct cttcggcaat gtcctggtct gtcatgtaat cttcaagaac
      601 cagcgtatgc actcggccac cagcctcttc atcgtcaacc tggcagtggc agacatcatg
      661 atcacattgc tcaacacgcc cttcactttg gtccgctttg tgaacagcac atgggtgttt
      721 gggaagggca tgtgtcatgt cagccgcttt gcccagtact gttctctaca tgtctcagca
      781 ctgaccctga cagctatcgc tgtggaccgt caccaggtca tcatgcatcc cttgaagcct
      841 cggatctcca tcaccaaggg tgtcatatat attgctgtca tctgggtcat ggctaccttc
      901 ttctctctgc ctcatgccat ctgccagaaa ctgtttacct tcaagtacag tgaggacatt
      961 gtgcgctccc tctgcctgcc ggacttccca gagccagctg acctcttttg gaagtacctg
     1021 gacctggcca ccttcatcct actctacctt cttccactct tcattatctc agtggcctat
     1081 gctcgtgtgg ccaagaaatt gtggctctgc aacactattg gcgacgtgac cacagagcag
     1141 tacctcgccc tgagacgcaa gaagaagacc accgtgaaga tgctggtgct tgtggtggtc
     1201 ctcttcgctc tctgctggtt ccccctcaac tgctatgtcc tccttctgtc cagcaaggcc
     1261 atccacacca acaacgccct ctactttgcc ttccactggt ttgccatgag cagcacttgt
     1321 tataacccct tcatctactg ctggctcaac gagaacttca gggtggagct gaaggcactg
     1381 ttgagcatgt gccagaggcc gtccaagcct caggaagaca ggctgccctc cccggttcct
     1441 tccttcaggg tggcatggac ggagaagagc catggtcgga gggctctgct agctaatcac
     1501 caccttccct cttcccagat ccagtctggg aagacagatc tgtcctctgt ggaacccact
     1561 gtggccgtga gttaggggaa gctggaagtg gtgggagagg gttctgtcct ctcacaattg
     1621 accagactca aggtgtcgga aagttcccca gaatcagtga gatgcttggg ttcctaggaa
     1681 cctgtccagc accctctggt ttgcaaacct tgtagaagat accatgaggt gttgtgtgtg
     1741 gatctttgag caagagctcc ggaagccacc tcagctccag cagaggctgg ttcagtcaac
     1801 ccctgtcagt tgtatagcat ctgccacctt tgtccttcct tctgctgagc acccacagca
     1861 ggacccgggt cacattattg gtaggcctga cgcatgtgct cagaaaagaa cttcactagc
     1921 cagggagaac aggcatggag gccttctgaa gtcattgggg caagtccaat cacacagctt
     1981 caatggcctt ggctctgtct atgccagaca gggcccatct tggtttctta aaatagaaat
     2041 tagcattgcc attttgaaaa ggtcaaaaag ggaaagaaat taattcagcc ccatcgattt
     2101 gttaaaaaaa aaaagcctgt taatatgctg tgaatttatc tgtaactttg ccttctctat
     2161 gtgtgcacat ttgtactttt aaagtcatga actacatgta tccatttaga ttgtaataat
     2221 tagcaagaaa tagggatata ttggagtact attgaattcc tccatgacaa atggggtccc
     2281 tcagcatatg agaagagaag agaggagagg agaggagggt aggggagggg agaggagagg
     2341 agaggagagg aggggagagg aagggaaggg agtggagggg aggggagagg agaagtaagc
     2401 aaggtgaggg ttggatcaac tctaccttgt aactagtgat gggtggggcc tggccctctc
     2461 ctaggtggtt accatcaaga tgagcagtgc accagagagc cgggaggtag gctccctttc
     2521 tcctgacccc cagaaagaag aaggggtgaa tcactgttcc cttttaatgg acaatgtgag
     2581 gacttgcttt ccaataagct ggaaataatt gtgcttagac acctcatctg cccaagatgt
     2641 ctagacaggg catttttctc cattgtctga atgatgaaaa actttttcac accagttcct
     2701 gagagaagat ttccctgtct acatcacctg agaaattcat gtgtcatttt ttaaaaactt
     2761 acaggcttct tgaagccact ctattcctcg agggcccctt tgtcagagaa atctcattcc
     2821 aggtgcccag tgattttgcc atcttccatg tggtcccgat gactctcagt gttccccact
     2881 gacagctgtg ccaggcagaa ctgactccaa tccccatgcc cagagccatg gctgctgctg
     2941 cgctagcatc ggattcccac ctcctcctca cagagccacc acagagacaa gccatctttg
     3001 tggagctgag agggaaactg aggctcaagg gaggagaggc tcatccaaga ctcatttaga
     3061 actctcagtt gctaactgaa gcacaatctg cttaagtctg attccctcta acaaacctgg
     3121 ggggttgctt aaactagtct gtccatagga gtgttagaaa aaaatccaag ataaaaaaaa
     3181 aatgtcatct atagaacatc agtttgttta aaaaaaatgt tttggagagg gtagatttcc
     3241 aaatataaag tgagtttttg aggccacagc ttctgcatct gtcctatctc tgtattgtca
     3301 gctggtacct gggagtttca tctttcatgt ggccaagaag agtcatggta ctaacctgag
     3361 gacaggcagc agcaacacac agtgtgtctt cccctaggga cttgtgggag gagcttcagc
     3421 catagctccc agagggcagc tggagacagc accctgtcac agagtcagcc atcagatctg
     3481 catctcttgt ccgtccccat ctgctccctt ccttgtatgc gtcggagcag acgtgactgg
     3541 taacagtgac tgtggtcttt gtgaagcctg agtttttcca atatgctgca aagtgtgctt
     3601 tattgtgagt caccataggc gcaataaaac ctctcctctg tgtgca
//
