LOCUS       NM_199399               2134 bp    mRNA    linear   ROD 07-OCT-2024
DEFINITION  Rattus norvegicus G protein-coupled receptor 108 (Gpr108), mRNA.
ACCESSION   NM_199399 XM_236808
VERSION     NM_199399.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   3  (bases 1 to 2134)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC061996.1.
            
            On Jan 12, 2004 this sequence version replaced XM_236808.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061996.1, SRR8487226.184745.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q11"
     gene            1..2134
                     /gene="Gpr108"
                     /note="G protein-coupled receptor 108"
                     /db_xref="GeneID:316136"
                     /db_xref="RGD:735149"
     exon            1..141
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..1749
                     /gene="Gpr108"
                     /note="protein GPR108"
                     /codon_start=1
                     /product="protein GPR108 precursor"
                     /protein_id="NP_955431.1"
                     /db_xref="GeneID:316136"
                     /db_xref="RGD:735149"
                     /translation="MAVSERRGLSGESPAQCRWEYLSLLVLMLSGCSGRIHRLTLTGE
                     KRADIQLNSFGFYTNGSLEVELSLLRLSLQETEDKFPKVGFSLSRVRSGSVRSYSSRN
                     SHECPLERNSSNFLVLFLINIKDLQVQVRKYGEQKLFISPGLLPEAPSQSGPPKPDPT
                     GTPKDNHVIHPSPKKMSAVKEDQAKLTVPQVSGDKALPAGHRHSSDGQPQSQPPTRGP
                     SGKEKDLVLGLGHLNDSYNFSFHIVIGSRAEEGQYSLNFHNCYNTIPGQEQPFDLTVM
                     IREKNPEGFLSAAEIPLFKLYLIMSACFLAAGIFWVSVLCKNTYSVFKIHWLMAALAF
                     TKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYM
                     LSDKEKKIFGIVIPLQVLANVAYIVIESREEGASDYGLWKEILFLVDLICCGAILFPV
                     VWSIRHLQDASGTDGKVAMNLAKLKLFRHYYVMVICYIYFTRIIAILLRVAVPFQWQW
                     LYQLLVESSTLAFFVLTGYKFQPAGDNPYLQLPQQEDEEDVQMEQVMTDSGFREGLSK
                     VNKTASGRELL"
     exon            142..261
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            262..312
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            313..395
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            396..517
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            518..732
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            733..837
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            838..971
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            972..1047
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            1048..1121
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            1122..1239
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            1240..1370
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            1371..1414
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            1415..1464
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            1465..1548
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            1549..1676
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
     exon            1677..2119
                     /gene="Gpr108"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcgcagccc cagagatggc agtgagcgag aggagggggc tcagcggcga gagcccagcg
       61 cagtgtcgat gggaatactt gtcgctgctg gtgctgatgc tgagcggctg ctcaggccgt
      121 atccaccggc tgactctcac aggggagaag cgagctgaca tccaactgaa cagctttgga
      181 ttctacacca atggttccct ggaagtagag ctgagcttac tgcgactcag cctccaggag
      241 acagaagaca agtttccaaa ggtgggattc agcttgagcc gagttcggtc cggcagtgtt
      301 cgctcctact cgagccggaa ttcccatgaa tgccctctgg agagaaacag cagcaacttc
      361 ctggtcctgt tcctcatcaa tatcaaggac ctgcaggtcc aagtccgaaa atatggggaa
      421 cagaagttgt tcatctcccc tggcctcctc cctgaagctc cctcccagtc agggcccccg
      481 aagccagacc caacaggcac ccccaaggac aaccatgtca ttcacccatc tccgaaaaag
      541 atgtctgcag tcaaggaaga tcaggcaaag cttacagtgc cccaggtttc cggggataaa
      601 gctctcccag cgggacacag gcactcatct gatggccagc cacaaagcca gccacccaca
      661 cgggggccca gtgggaagga gaaggatctg gttttgggac tgggccacct caatgactcc
      721 tacaacttca gtttccacat tgtgatcggc tccagggctg aggaaggcca gtacagcctc
      781 aacttccaca actgttacaa cacaatacca ggccaggagc agccgttcga cctcactgta
      841 atgatccgag agaagaatcc agaaggcttc ctgtcagcag ctgaaatccc cctcttcaaa
      901 ctctatctaa tcatgtccgc ctgcttcttg gccgccggca tcttctgggt gtccgtgctc
      961 tgcaagaaca cgtacagtgt ctttaagatc cactggctca tggcagccct ggcgttcacg
     1021 aagagtgtct ccctactctt ccacagcatc aactactact tcatcaacag ccagggccac
     1081 cccatcgaag gcctcgccgt catgcattac atcactcacc tgctgaaggg cgcccttctc
     1141 ttcatcacca ttgccctgat cggctcgggc tgggcctttg tgaagtatat gctgtcggac
     1201 aaggagaaga agatttttgg gattgtgatt cccctgcagg tcctggctaa tgtagcatac
     1261 attgtcatcg agtcccgtga ggagggcgcc agcgactatg gactctggaa ggagatcttg
     1321 ttcctggtgg atctcatctg ctgtggtgcc atcctcttcc cagtggtctg gtccatccgg
     1381 catctacagg acgcgtctgg cactgacggg aaggtggcaa tgaacctggc caagctgaag
     1441 ctgttccgac attactacgt catggtcatc tgctatatct actttacgcg catcatcgcc
     1501 attctgcttc gagtggcggt gcccttccag tggcagtggc tgtaccagct cttggtggag
     1561 agttccaccc tggccttctt cgtgctcacc ggctacaagt tccagccggc gggggacaac
     1621 ccatacctgc agctgccaca gcaggaggat gaggaggacg tacagatgga gcaagtgatg
     1681 acagactctg ggttccggga aggcctgtcc aaagttaaca agacagccag cggccgggag
     1741 ctgttgtgac ttccccgtgt tcagagatcc gccttcagac cttctgcacc tcgctgcgct
     1801 acacttgtcc ccaagtgtgc agggagtcca agaggaagct gctcacaggg caccagggca
     1861 tggatcccag ggagcttttc agagaagatg cccttctccc agcagcacca ccctctcctc
     1921 gccgggtacc cttcagcctc ttgtacaata aggaccagtc tccttttcat ttcttacgtc
     1981 tcctgacttt gagcgttctg agtgtctaag gcagtctgca tttatgatct tgaaccctga
     2041 attccagtcc acatggtggc tctggagagc ctgggcttca taaaactttg attagtaaac
     2101 aaataaagag aaggcagaaa aaaaaaaaaa aaaa
//
