LOCUS       NM_201991               1501 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus GPN-loop GTPase 3 (Gpn3), transcript variant 1,
            mRNA.
ACCESSION   NM_201991 XM_341083
VERSION     NM_201991.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Mar 18, 2021 this sequence version replaced NM_201991.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY513752.1, SRR26360172.1766510.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMEA5760400 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-148               JAXUCZ010000012.1  39858885-39859032   c
            149-257             JAXUCZ010000012.1  39857391-39857499   c
            258-425             JAXUCZ010000012.1  39854219-39854386   c
            426-550             JAXUCZ010000012.1  39852782-39852906   c
            551-666             JAXUCZ010000012.1  39851652-39851767   c
            667-763             JAXUCZ010000012.1  39851441-39851537   c
            764-892             JAXUCZ010000012.1  39850765-39850893   c
            893-1501            JAXUCZ010000012.1  39850070-39850678   c
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..1501
                     /gene="Gpn3"
                     /gene_synonym="Atpbd1c"
                     /note="GPN-loop GTPase 3"
                     /db_xref="GeneID:360810"
                     /db_xref="RGD:1303034"
     exon            1..148
                     /gene="Gpn3"
                     /gene_synonym="Atpbd1c"
                     /inference="alignment:Splign:2.1.0"
     CDS             101..955
                     /gene="Gpn3"
                     /gene_synonym="Atpbd1c"
                     /note="isoform 1 is encoded by transcript variant 1;
                     ATP-binding domain 1 family member C"
                     /codon_start=1
                     /product="GPN-loop GTPase 3 isoform 1"
                     /protein_id="NP_973720.2"
                     /db_xref="GeneID:360810"
                     /db_xref="RGD:1303034"
                     /translation="MPRYAQLVMGPAGSGKSTYCSTMVQHCEALNRSVQVVNLDPAAE
                     HFNYPVMADIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDY
                     ILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALS
                     AMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYSLLEDSTGDLRSQKFKKLTKAV
                     CGLVDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYGEDLEFKEPKEHEEESSSMFDE
                     YFQERQNE"
     exon            149..257
                     /gene="Gpn3"
                     /gene_synonym="Atpbd1c"
                     /inference="alignment:Splign:2.1.0"
     exon            258..425
                     /gene="Gpn3"
                     /gene_synonym="Atpbd1c"
                     /inference="alignment:Splign:2.1.0"
     exon            426..550
                     /gene="Gpn3"
                     /gene_synonym="Atpbd1c"
                     /inference="alignment:Splign:2.1.0"
     exon            551..666
                     /gene="Gpn3"
                     /gene_synonym="Atpbd1c"
                     /inference="alignment:Splign:2.1.0"
     exon            667..763
                     /gene="Gpn3"
                     /gene_synonym="Atpbd1c"
                     /inference="alignment:Splign:2.1.0"
     exon            764..892
                     /gene="Gpn3"
                     /gene_synonym="Atpbd1c"
                     /inference="alignment:Splign:2.1.0"
     exon            893..1501
                     /gene="Gpn3"
                     /gene_synonym="Atpbd1c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggttgcgatt ggcttctacc cacgctcccg gaactcagtg gccgtcgcgc gaaggctgaa
       61 gggagtgtgg cagatcgctg tgagaacccg gagaaccggc atgcctcggt atgcgcagct
      121 tgtcatgggc cccgcgggca gcgggaagag cacctactgt tccaccatgg ttcagcactg
      181 cgaagccctc aaccgatctg tccaggtagt caacctggac ccagcggcag aacacttcaa
      241 ctatcctgtg atggctgaca tccgggaact gattgaggtg gacgacgtga tggaggacga
      301 ttctctgcgg tttggtccca acggagggtt ggtgttctgc atggagtact ttgccaataa
      361 ctttgactgg ctggagaact gtctgggcca cgtcgaggac gactacatcc tatttgactg
      421 tccaggtcag attgagctct acacccacct gcccgtcatg aagcagctgg tccagcagct
      481 tgaacagtgg gagttccgag tgtgcggggt gttcctggtt gattctcagt tcatggtgga
      541 gtcattcaag tttatctctg gcatcctggc agccttgagt gccatgatct ccctggaaat
      601 cccacaggtt aacatcatga cgaagatgga cctgctgagc aagaaagcca agaaggaaat
      661 tgagaagttt ctagatccag acatgtactc tctgctagaa gattcaacag gtgacttaag
      721 aagtcagaaa ttcaagaagt tgacgaaggc cgtgtgtggt ctggttgatg actacagcat
      781 ggttcggttt ctgccgtacg atcagtcaga tgaggagagc atgaacatcg tgctccagca
      841 cattgacttc gccattcagt acggggagga cttggagttt aaggagccca aggagcatga
      901 agaagagtct tcctccatgt ttgatgagta ttttcaagaa cggcagaatg agtgaggttg
      961 actacgaagc tcctatcccg ttgtggccac atcgagaagt gctcttcccc tggaggatgt
     1021 aacatgggag gctgctgctg ctgtctgtaa ggaacgctgg gctctagggg tgagccagta
     1081 agtaagcgat tgagcgagcg agtctggcct gtgcatgagc tctgcaactg ctgctcttcc
     1141 aggagtcaaa agtcaaagta gaaattaatg cacaaagact tgtatataat ataaatcaac
     1201 ctagtcacag atatacatcg cccatgtgtg gtgcgtgcgt gcgtgcgtgt gtgtgtgtgt
     1261 gtgtgtgtgt gtgtgtgtgt gtgcaattat acccgatata aaatcattat tacaattgga
     1321 tttttatttt ttgaggggtc ttcttttgat ttacttgttt gtttctggag aggttcaaat
     1381 tattgtgaca aaaattatag atctacatca aatcaaaaaa attggaaggc tatacataaa
     1441 tcttattttc caaaatgaaa catgtattat ttatataatt aaaaatgaaa acggtgtttg
     1501 a
//
