LOCUS       NM_001270959            1262 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus GPN-loop GTPase 2 (Gpn2), mRNA.
ACCESSION   NM_001270959 XM_342932
VERSION     NM_001270959.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1262)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Aug 15, 2012 this sequence version replaced XM_342932.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.283761.1,
                                           SRR26360176.2019480.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-411               JAXUCZ010000005.1  151093617-151094027
            412-568             JAXUCZ010000005.1  151094925-151095081
            569-729             JAXUCZ010000005.1  151097359-151097519
            730-860             JAXUCZ010000005.1  151099263-151099393
            861-1262            JAXUCZ010000005.1  151100713-151101114
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1262
                     /gene="Gpn2"
                     /gene_synonym="Atpbd1b; RGD1311749"
                     /note="GPN-loop GTPase 2"
                     /db_xref="GeneID:362614"
                     /db_xref="RGD:1311749"
     CDS             1..933
                     /gene="Gpn2"
                     /gene_synonym="Atpbd1b; RGD1311749"
                     /note="ATP-binding domain 1 family member B"
                     /codon_start=1
                     /product="GPN-loop GTPase 2"
                     /protein_id="NP_001257888.1"
                     /db_xref="GeneID:362614"
                     /db_xref="RGD:1311749"
                     /translation="MAGAAPTTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVN
                     LDPANEGLPYECAVDVGELVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLEPL
                     RGHYFLFDCPGQVELCTHHTSLRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLC
                     TSLATMLHVELPHVNLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHLASDPFFSHY
                     RQLNEKLVQLIEDYSLVSFIPLNIQDKDSIQRVLQAVDKANGYCFGVQEQRSLEALMS
                     AAVGADFHFSSTLGIQEKYLASSDQTAEQEAMQL"
     exon            1..411
                     /gene="Gpn2"
                     /gene_synonym="Atpbd1b; RGD1311749"
                     /inference="alignment:Splign:2.1.0"
     exon            412..568
                     /gene="Gpn2"
                     /gene_synonym="Atpbd1b; RGD1311749"
                     /inference="alignment:Splign:2.1.0"
     exon            569..729
                     /gene="Gpn2"
                     /gene_synonym="Atpbd1b; RGD1311749"
                     /inference="alignment:Splign:2.1.0"
     exon            730..860
                     /gene="Gpn2"
                     /gene_synonym="Atpbd1b; RGD1311749"
                     /inference="alignment:Splign:2.1.0"
     exon            861..1262
                     /gene="Gpn2"
                     /gene_synonym="Atpbd1b; RGD1311749"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggcggggg ccgccccgac tacagccttc gggcaggctg tgatcgggcc cccgggctca
       61 gggaaaacta cgtactgcct gggcatgagt gagttcctgc gcgcgctggg gcggcgcgtg
      121 gcggtggtga acctggaccc agctaacgaa ggactgcctt atgaatgtgc cgtggacgtg
      181 ggcgagctgg tgggtctggg cgacgtaatg gacgcgctgc gccttgggcc caacggtggc
      241 ctgctctact gcatggagta cctggaagct aacctagact ggctgcgcgc gaagctggag
      301 cccctgcgag gccactactt tctcttcgac tgccccggac aagtggagct ctgcacgcac
      361 cacacctccc tacgcagcat cttctcccag atggctcagt gggacctgag gttgactgct
      421 gttcaccttg tggattctca ctactgtaca gacccagcca agttcatctc agtactgtgt
      481 acctccctgg ccaccatgct gcatgtggaa ctgccccatg tcaacctcct ctccaagatg
      541 gaccttattg aacactatgg gaagctggcc ttcaacctgg actactacac tgaagtcctg
      601 gacctctcct acctgcttga ccacctggca tccgaccctt tcttcagtca ctaccgacag
      661 ctcaatgaga agctagtgca gctcatcgag gactacagcc tggtctcctt catcccactg
      721 aacatccagg acaaggacag catccagcga gtcttacagg ctgtggataa agccaatggc
      781 tactgctttg gggttcaaga gcagcggagt ctggaagccc tgatgtctgc agcagtggga
      841 gctgacttcc atttctcctc caccctgggc atccaggaaa agtacttagc atcctcggac
      901 cagaccgcag agcaggaagc catgcagctg taatatatgg ggcctggatc gccgtggaca
      961 gctcagcagg gtatggaccc aaagccatat ccagccagag cagaggctgg aagggaacca
     1021 cggtccctgc aaaggacttc tgaataagaa gccacacaca gcaccctttg tggtgcccat
     1081 aaactcaggg ccctgccccc aggaggtggg gaccaaaggt tgtggaatag ctctcctcgg
     1141 gctgcagtgg atgggtgcgc tctgacacag gattattttc tattttttgt gacctcaaac
     1201 tttccttcaa ccctatggac ccagggactc ggagaacaaa gaaacatctt tgtccctcca
     1261 aa
//
