LOCUS       NM_001024979            1903 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus G patch domain containing 4 (Gpatch4), mRNA.
ACCESSION   NM_001024979 XM_215614
VERSION     NM_001024979.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Nagamachi,A., Matsui,H., Asou,H., Ozaki,Y., Aki,D., Kanai,A.,
            Takubo,K., Suda,T., Nakamura,T., Wolff,L., Honda,H. and Inaba,T.
  TITLE     Haploinsufficiency of SAMD9L, an endosome fusion facilitator,
            causes myeloid malignancies in mice mimicking human diseases with
            monosomy 7
  JOURNAL   Cancer Cell 24 (3), 305-317 (2013)
   PUBMED   24029230
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC093381.1.
            
            On Jun 25, 2005 this sequence version replaced XM_215614.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC093381.1, CV078035.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1903
                     /gene="Gpatch4"
                     /gene_synonym="RGD1311086"
                     /note="G patch domain containing 4"
                     /db_xref="GeneID:295228"
                     /db_xref="RGD:1311086"
     exon            1..64
                     /gene="Gpatch4"
                     /gene_synonym="RGD1311086"
                     /inference="alignment:Splign:2.1.0"
     exon            65..198
                     /gene="Gpatch4"
                     /gene_synonym="RGD1311086"
                     /inference="alignment:Splign:2.1.0"
     CDS             120..1343
                     /gene="Gpatch4"
                     /gene_synonym="RGD1311086"
                     /codon_start=1
                     /product="G patch domain-containing protein 4"
                     /protein_id="NP_001020150.1"
                     /db_xref="GeneID:295228"
                     /db_xref="RGD:1311086"
                     /translation="MSVTPEVKSRGMKFAEEQLLKHGWTQGKGLGRKENGITQALKVT
                     LKQDTHGVGHDPAKEFTDHWWSDLFNKTAANLVVDSGKDGVQIRRLSKETTQRSHSKP
                     SLLYQKFVKTATLTSGEEKPDRDLESCSDVDNREPIPPKILTDEMLLKACEGRTAHKA
                     ARIGITMKAKLARLEAQEQAFLARLKGSKDVGTSQPLTDSEPSQKKKKRRKQKEEEEA
                     ATTEKSLGEELLEHTDKSFRKSKKKKKKKKDEREGTAIGSEEEEAAGVCGPAELSTEQ
                     SDQSSRKKKKRRRRHHEEEEEMGVCDEGGRDVTGGPKAVNSGADTDPWRSSKKRQTCE
                     EDLDTQDEEDKDDLTKKERKVRKKDKKKRQQYCEEVLDVSNKDDGRTWEAEDGGERSQ
                     PHPKARAKKKKRKTD"
     exon            199..272
                     /gene="Gpatch4"
                     /gene_synonym="RGD1311086"
                     /inference="alignment:Splign:2.1.0"
     exon            273..365
                     /gene="Gpatch4"
                     /gene_synonym="RGD1311086"
                     /inference="alignment:Splign:2.1.0"
     exon            366..452
                     /gene="Gpatch4"
                     /gene_synonym="RGD1311086"
                     /inference="alignment:Splign:2.1.0"
     exon            453..544
                     /gene="Gpatch4"
                     /gene_synonym="RGD1311086"
                     /inference="alignment:Splign:2.1.0"
     exon            545..595
                     /gene="Gpatch4"
                     /gene_synonym="RGD1311086"
                     /inference="alignment:Splign:2.1.0"
     exon            596..1875
                     /gene="Gpatch4"
                     /gene_synonym="RGD1311086"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaagatggc ggcacccaag tcgtgtatgg cacgtgcttc cacggagagg actgtacact
       61 gatgagtatg gtgccacttt ttccctgctg agaacctgag gacagagcct ctccctgcca
      121 tgagtgtcac cccagaggtg aagagtcgtg ggatgaagtt tgctgaagag cagctgctga
      181 agcatgggtg gactcaaggc aaaggcctgg gccggaaaga gaatggcatc acccaggccc
      241 tcaaggtgac actgaagcaa gatacccatg gggtgggaca tgaccctgcc aaggaattta
      301 cagaccactg gtggagtgat ctcttcaaca agactgccgc caacttggta gtggactctg
      361 gcaaggatgg agtgcagata aggcgccttt ccaaggagac cacccagcgc agtcactcaa
      421 agcccagctt gctgtatcag aagtttgtga agacagccac actaacctca ggtgaagaga
      481 agcctgacag agacttggag agctgcagtg atgttgacaa ccgtgaaccc atacccccaa
      541 agattctgac tgatgagatg ctactcaaag cttgtgaggg gcgaacagca cacaaggctg
      601 cccggattgg aatcaccatg aaggccaagc ttgctcgcct ggaggcccaa gagcaggcct
      661 tcctggctcg gcttaaaggc tcaaaggacg tgggcacctc tcaaccactg actgacagtg
      721 agccctccca aaaaaagaaa aagaggagga agcagaaaga ggaggaagag gctgcaacaa
      781 ctgaaaagag tctaggtgag gagctcctgg aacacactga caagagcttt aggaaaagta
      841 agaagaaaaa aaagaagaag aaagatgaga gagagggaac agctatagga agtgaggagg
      901 aagaggctgc aggagtgtgt gggcctgcag aactgagcac agagcaatct gatcagtctt
      961 ccaggaaaaa gaagaaaagg aggaggcggc accatgaaga agaggaagag atgggagtct
     1021 gtgatgaagg aggcagagat gtgacaggcg ggccaaaggc agtcaacagt ggagcagata
     1081 cagatccctg gagaagcagc aagaagcgac agacatgtga ggaggacttg gatacccaag
     1141 atgaagaaga taaggatgac ctaacaaaaa aagagagaaa ggtcagaaaa aaagacaaaa
     1201 agaaaagaca gcagtactgt gaggaggtct tggatgtaag caacaaagat gatggcagga
     1261 cttgggaagc agaggatgga ggtgagagaa gtcagccaca cccaaaggcg agagccaaaa
     1321 aaaagaagcg gaagacagac tgagggtcta gagcagatct cagctgactt cctctcaggg
     1381 gtagctggtt tggggcaggg tttctgcaca ctcctctgta agcagctctg gagaacctgt
     1441 ctgccgagga gagccaaagc attctatgct agctgagggg tggacatggt cccctgtgaa
     1501 acttctgtcc aaaaaatata atcctggtgt ccggcaactt ggccacctaa aggatggtgg
     1561 gaagaggaat caggatggag gaatgtttca aggagtgcct cttctaaaag tctgaaaatg
     1621 tagatttata tgaaatgtct tgttttggag acagggattc tctaatgcag ctctggcttt
     1681 ccagaactca gaggtccatg tgcctctgcc tcatgggtgc ttagatcaga ggcatgcact
     1741 atcaccctgc aaactgtttt catttaaata ccatgaacgc ttaacataca tttctatgta
     1801 tttatatgta tgggttgggt tacccaccca gactgcctgt ttctaatcat gattaaatga
     1861 gaacttggac cccaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//
