LOCUS       NM_001401368            5088 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus G patch domain containing 2 (Gpatch2), transcript
            variant 1, mRNA.
ACCESSION   NM_001401368 XM_006250435
VERSION     NM_001401368.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5088)
  AUTHORS   Hendrickx,A., Beullens,M., Ceulemans,H., Den Abt,T., Van Eynde,A.,
            Nicolaescu,E., Lesage,B. and Bollen,M.
  TITLE     Docking motif-guided mapping of the interactome of protein
            phosphatase-1
  JOURNAL   Chem Biol 16 (4), 365-371 (2009)
   PUBMED   19389623
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000013.1.
            
            On Feb 9, 2022 this sequence version replaced XM_006250435.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.1654638.1,
                                           SRR26360176.743579.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-161               JAXUCZ010000013.1  101316413-101316573
            162-872             JAXUCZ010000013.1  101325531-101326241
            873-934             JAXUCZ010000013.1  101331007-101331068
            935-1117            JAXUCZ010000013.1  101333129-101333311
            1118-1197           JAXUCZ010000013.1  101333711-101333790
            1198-1265           JAXUCZ010000013.1  101408400-101408467
            1266-1305           JAXUCZ010000013.1  101421023-101421062
            1306-1376           JAXUCZ010000013.1  101426979-101427049
            1377-1471           JAXUCZ010000013.1  101447125-101447219
            1472-5088           JAXUCZ010000013.1  101453493-101457109
FEATURES             Location/Qualifiers
     source          1..5088
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q26"
     gene            1..5088
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /note="G patch domain containing 2"
                     /db_xref="GeneID:289362"
                     /db_xref="RGD:1308865"
     exon            1..161
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /inference="alignment:Splign:2.1.0"
     CDS             103..1692
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /note="isoform 1 is encoded by transcript variant 1; G
                     patch domain-containing protein 2"
                     /codon_start=1
                     /product="G patch domain-containing protein 2 isoform 1"
                     /protein_id="NP_001388297.1"
                     /db_xref="GeneID:289362"
                     /db_xref="RGD:1308865"
                     /translation="MFGADGRPAIGAAAAARKSWHFSRTMEELVHDLVSALEESSEQA
                     RGGFAETGDHSRNLSCPLKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSK
                     DYREKHSNNKKDRSDSDDQMLVAKRRPSSTLNNSVRGKRLLWHESDFAVDNLGNRTLR
                     RRRKVKRMAVDLPQDISTKRTMTQPPDGCRDQDMDSDGASQYPEFIRSKVKKRRLKVI
                     RPKAPEEGAVLESEEVSQADKDKMEYVEPKASDELRSESDSSSLSSTDAGLFTNDEGR
                     QGDDEQSDWFYEKESGGACGIAGVAPWWEEEGPVELDTNLPDPVFESILSGSFPLMSH
                     PGRRGFQARLSCLHGVPSKNIKKSAGAPPSMMSAPGPISNKRMVHFSPDAHHHDHWFS
                     PGARTEHGQHQLLRDNRAERGHKKSCSVKTASRQTSMHLGSLCTGDIKRRRKAAPLPG
                     PGPTTTGIVGENAQPILESNIGNRMLQSMGWTPGAGLGRDGRGISEPVQAIQRPKGLG
                     LGFPLPKSTPTSPVPASGKPA"
     exon            162..872
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /inference="alignment:Splign:2.1.0"
     exon            873..934
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /inference="alignment:Splign:2.1.0"
     exon            935..1117
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1118..1197
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1198..1265
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1266..1305
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1306..1376
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1377..1471
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1472..5088
                     /gene="Gpatch2"
                     /gene_synonym="Gpatc2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctctcaaaa tgctgaagtg ctgtgtggaa gtggccgggg ctgtgggagt tagagtcggt
       61 cctcgggcct gagcctcgag gccgcgctcc cgggtgtcgt tgatgtttgg ggccgacggg
      121 cgcccagcga tcggagccgc cgccgccgcc cggaagagct ggcatttcag tcgaacaatg
      181 gaagagcttg ttcacgatct tgtctctgca ctggaagaga gctctgagca agcccgaggt
      241 ggttttgctg aaacgggaga tcattctcga aatctgtctt gccccctgaa gcgccaggcc
      301 aggaagagga gagggaggaa gcggagatcc tacaatgttc accacccctg ggagactggc
      361 cactgcttaa gcgaaggctc ggattctagt ttagaggaac caagtaagga ctacagagag
      421 aagcacagca acaacaaaaa ggaccgcagt gactccgatg accagatgtt agtggcgaag
      481 cggaggccgt cctccacctt aaacaacagt gttcgaggta agcgacttct gtggcatgag
      541 tctgacttcg cggtggacaa ccttgggaac agaactctcc gccggaggag gaaggtgaag
      601 cgcatggcgg tggatctccc gcaggacatc tccaccaaaa ggacgatgac ccagccgcct
      661 gatggctgta gagaccagga catggacagc gatggagcca gccagtatcc cgagtttatc
      721 cgcagtaaag tcaaaaagcg gaggctgaag gtgatcagac cgaaagcccc ggaggaagga
      781 gcggtgttgg agagtgaaga agtaagccag gccgacaagg acaagatgga gtatgtggaa
      841 ccgaaagcct cagatgagct caggagtgaa agtgactcca gcagcctcag cagcactgat
      901 gccggcctgt tcaccaacga tgagggaaga caaggtgacg atgagcagag cgactggttc
      961 tatgagaagg agtcgggcgg agcctgtgga attgctggag tcgcgccctg gtgggaagag
     1021 gaaggccccg tagagctgga caccaacctc cccgaccccg tgtttgagag catcttaagt
     1081 ggctccttcc ctctcatgtc acatcctggc agaagaggtt tccaagctag actcagttgc
     1141 cttcatggag tgccttcaaa gaatattaag aaatctgcag gggctccacc ttcaatgatg
     1201 tctgctcctg gccctatcag taacaagagg atggttcact tctccccaga cgcccatcac
     1261 cacgaccact ggtttagccc tggggctagg acagagcacg gccagcatca gcttctgaga
     1321 gataaccgag cggaaagagg gcacaagaaa agctgctccg tgaaaacagc cagcaggcaa
     1381 acaagcatgc atttaggatc cttgtgcaca ggagacatca aaaggagaag aaaagctgcc
     1441 ccattgcctg gacctggacc cactacaaca ggaattgtag gtgaaaacgc ccagccaatc
     1501 ctagagagca acatcgggaa ccgaatgctt cagagtatgg gatggacacc cggggcaggc
     1561 ctcgggcgag atggcagagg gatctcggag ccagttcaag ccattcagag gccgaaaggg
     1621 ttaggacttg gatttcctct accaaaaagc actcccacca gccctgtccc cgcatcggga
     1681 aagcctgcct gagcagaaag gcagagaaga gaaccagtga cttctgtcgc cgtgcccgtt
     1741 actataacat gatcacagag cccactggtg tgaagatgac ctcagcaccg ccgccagcca
     1801 gcttccagac tgcagagtcc cacagcgata gaaatgggtt ccatcacagc ccacggtgct
     1861 gaagtacgag ccgcagcctt tacgtctcct cagtttccat cggttcctag acatgagtaa
     1921 cagtcaggct cttatttatt ttgatcctag aagtccgttc tttgtgctgc ccggctcagt
     1981 gcagcagcag tgcgtgcgtg cgtgcgtgcg tgcgtgcgtg cgtgcagcct ggaaacagtt
     2041 gagcacaccc acttggttgg agagggtcac attctcatgt tgcctacact aagtagttct
     2101 gcctccctct ccccacgtgc aggagtcagt cattagctca gtcattagct catctgagaa
     2161 ggcttggtaa gctcgcactc ctttgctttg gctctgatga cgcttttttc aacaatgtag
     2221 cataaattca gtggagagac agcaatcagt gtttccctct gacatttgac aagagctaac
     2281 ttcctcatcg tcatcaccag tgctgtcagc atcactccag tgcagagttt atacgtttac
     2341 ctcatttagg acatgaagtc attactaaaa gaaaatgtat ttttaaattc atcctgactg
     2401 aactgtaaac cctgtcctct agatgtctac ctcttcccaa aggctggggt ttaaggatca
     2461 gctccaaggt ggagaagagt ggctggttca aggcttagtc actgaagtaa ataaattaaa
     2521 ctcttgagtc actttatttg aagatttaaa tagctttgtc caaaaaccga gatgtcaggc
     2581 aatggcctaa cccacttacc aagaacagga ggaactgcgg ggacccatca ttctcagacc
     2641 aaaacactta ctttaaaatt aagtgaaaca ctatgttcct tccattccat ttctaagtca
     2701 ttctcttcat aatgtcagaa attttaagtt gttctttgtt cagaaaaaaa tgatttatta
     2761 taatcttcat taaaaacccc ggtactcgtt attaccaacc ctggtcgcct ttgcttcaga
     2821 aagtgctgtg atcacccacc cacactcgtg tatccttaaa gcagtaggaa cttcaatttt
     2881 gtaaattgaa aattcttttt aaatatttaa ggcagtagga aaggttccac aggttaacag
     2941 ccctttccta tgtggtcctc tataataaat ggggcctcgg gagtccagca catgtctgca
     3001 tttcttctac cctggcaagt ggccgtggta agaattgggc cacctaggac acaggtggac
     3061 agctgtgcct cacggaccac tcatgttggg gagagcattg ctgctgggac aagctcgtca
     3121 ctagcaaact gccattttaa atagctgtct tttgcagggg aagatggagg agactagtca
     3181 tgtgctggac cccgggtcta ttccaaacgt gtctgtcttt gcattttatt tcttggtggt
     3241 cttgtaaaac cctaggagag gacttttaaa taaagactca attttgagcc atcgagaaac
     3301 agttagaccc ctgtacactt agctccaggc ttcagaggaa gtggctactg tgtccttgcc
     3361 ttgtcctaaa ggacacacag gagcagccca cgtgctgagt ggtggggctc cataactgct
     3421 ctctctgagc acttcccatc actgccctct agacagtgtg aacccttggc tacggtttct
     3481 gccacaaagt cctcatgagc tgctgtgaca ccagagttct actctcacac aaaaagactc
     3541 gactcacagg taaccgtgga cacttcctat tccaccagtg tttatctgtt cacagtggat
     3601 gaccagcact tacaggagaa ccaccagccc ctagcccacc accagctgcc cacgggtacc
     3661 cttcaacatt cgagtccttg taaagagcag caagaagtga tgctcgggtc gacctgacca
     3721 cagccgagaa ataaacacaa gtgaaacagg aaactttggt gtaaatcaat tgtctgctgg
     3781 ggcatgaagc ccactggttt acatttgata gagattcagt tcagatcagt tcatgatttt
     3841 aaatgtatca ttcatatgac ctttaaatag tctagagatt tcctctgctt cctcatgaat
     3901 gtaccctgcc gttgtgcaag acaggaagac agggtctctt cccatccatg ccctacggtg
     3961 gccaaagcat ctaagcatgg ctgtcttagc agcgtgactc cacattgtgt atctttgatg
     4021 tcgaccagat gccggctgcc acctctcttc ctcttcttcc ctaaataaaa tgaataaggc
     4081 tgaattcccc tcggattcat ttctttttgt tttcatttga tccagtgact ttaaaagtgc
     4141 ccagccatgc tagcacccat cagtattccc agaagttggg aaaatgaggc aggattgcgg
     4201 ggtgtccaag accaacctag actgtatagt agttccagga cagatgaggg gatatagtga
     4261 tagcttgtct cgaaaataaa tatcaatgga aacccatcgc taagtgcaac ttacccataa
     4321 gtggggcacc atgtttgatt gaacacagtg gctgtggact cctggttaca gtgcttatgc
     4381 acaggaagag ttgagacatc agggttaaat gtgcacattt ggctgtgtgt acacgcggga
     4441 gcatttacac actgcaggag catttgcagc tcacgtttgt ttgcagtgta cagacaggat
     4501 tgcgaagttc aaattagtat tcagcgcact tcatttccag cagatgtttc gtaagccagt
     4561 gattgttgaa gtacttttat aaccatttta acctgtattt tgtgtttcag aaagagaaat
     4621 attctacatt ggtactgtaa agtgaggttg ttagcaagga gtgctttgat ggtttttttg
     4681 ttttttgttt ttttgtagaa aatgtattgg ttcagcaaag acgtgaacgt gtagagcatc
     4741 tcaagagccg tatttccaat ccagctgttg gtgtttctgt cttaaccttc tgttagttct
     4801 cttcctgtct gtcctgtttg gcggtggttg ggattgaatc taaggccttt tccagacaag
     4861 cactatcccc taggccaggc ctccacacct tctctcctac cttcagagtc atggaaatat
     4921 ttaaagattt tctgggtgtt ttctttggtg gtggagtgca tggggctctg tgtttgaccc
     4981 actgtaatga cttacagtta acatttaaca gtagagttaa ttgttggtaa gctctgggaa
     5041 ttcccagtgt ctcaaaaaaa aaaaattaaa gaaaaatttg gcaatgta
//
