LOCUS       NM_001047849            3159 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus glycerol-3-phosphate acyltransferase 4 (Gpat4),
            mRNA.
ACCESSION   NM_001047849 XM_001072707 XM_214379
VERSION     NM_001047849.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3159)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   2  (bases 1 to 3159)
  AUTHORS   Chen YQ, Kuo MS, Li S, Bui HH, Peake DA, Sanders PE, Thibodeaux SJ,
            Chu S, Qian YW, Zhao Y, Bredt DS, Moller DE, Konrad RJ, Beigneux
            AP, Young SG and Cao G.
  TITLE     AGPAT6 is a novel microsomal glycerol-3-phosphate acyltransferase
  JOURNAL   J Biol Chem 283 (15), 10048-10057 (2008)
   PUBMED   18238778
REFERENCE   3  (bases 1 to 3159)
  AUTHORS   Beigneux AP, Vergnes L, Qiao X, Quatela S, Davis R, Watkins SM,
            Coleman RA, Walzem RL, Philips M, Reue K and Young SG.
  TITLE     Agpat6--a novel lipid biosynthetic gene required for
            triacylglycerol production in mammary epithelium
  JOURNAL   J Lipid Res 47 (4), 734-744 (2006)
   PUBMED   16449762
REFERENCE   4  (bases 1 to 3159)
  AUTHORS   Vergnes L, Beigneux AP, Davis R, Watkins SM, Young SG and Reue K.
  TITLE     Agpat6 deficiency causes subdermal lipodystrophy and resistance to
            obesity
  JOURNAL   J Lipid Res 47 (4), 745-754 (2006)
   PUBMED   16436371
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from DQ480750.1.
            
            On or before Sep 15, 2006 this sequence version replaced
            XM_214379.4, XM_001072707.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DQ480750.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3159
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="W"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..3159
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /note="glycerol-3-phosphate acyltransferase 4"
                     /db_xref="GeneID:290843"
                     /db_xref="RGD:1310520"
     exon            1..103
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            104..1089
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     CDS             925..2295
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /EC_number="2.3.1.15"
                     /note="lysophosphatidic acid acyltransferase zeta;
                     putative lysophosphatidic acid acyltransferase;
                     1-acylglycerol-3-phosphate O-acyltransferase 6
                     (lysophosphatidic acid acyltransferase, zeta)"
                     /codon_start=1
                     /product="glycerol-3-phosphate acyltransferase 6"
                     /protein_id="NP_001041314.1"
                     /db_xref="GeneID:290843"
                     /db_xref="RGD:1310520"
                     /translation="MFLLLPFDSLIVNLLGISLTVLFTLLLVFIIVPAVFGVSFGIRK
                     LYMKTLLKIFAWATLRMERGAKEKNHQLYKPYTNGIIAKDPTSLEEEIKEIRRSGSNK
                     ALDKTPEFELSDIFYFCRKGMETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRL
                     TILWGLGVLIRYCFLLPLRIALAFTGISLLVAGTTVVGYLPSGRFKEFLSKHVHLMCY
                     RICVRALTAIITYHNRKNRPRNGGICVANHTSPIDVIILASDGYYAMVGQVHGGLMGV
                     IQRAMVKACPHVWFERSEVKDRHLVAKRLTEHVQDKSKLPILIFPEGTCINNTSVMMF
                     KKGSFEIGATVYPVAIKYDPQFGDAFWNSSKYGMVTYLLRMMTSWAIVCSVWYLPPMT
                     REKEEDAVQFANRVKSAIARQGGLVDLLWDGGLKREKVKDTFKEEQQKLYSKMIVGNH
                     EDRSRS"
     exon            1090..1159
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            1160..1460
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            1461..1535
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            1536..1625
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            1626..1719
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            1720..1835
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            1836..1891
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            1892..1977
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            1978..2106
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            2107..2186
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
     exon            2187..3137
                     /gene="Gpat4"
                     /gene_synonym="Agpat6; RGD1310520"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caaaggcggg cgtgcgcacg ctcttacgta ggcctgggcc ggcggcgggc agggcagggc
       61 gggagcggca gtcaccgagg actggagtcg agcctcacgg ccgctctggc agcatgtaaa
      121 caaccttttg ccaagaaccc aggtcaccgc taagaagggt gccttaaggg agaagaatat
      181 cagaggacac caatgccagg agtgtctgga acagtgctcg gtacaggcag catgagacgt
      241 tctgtgccag cctctgtgtg ctactggcaa aggctggggc tctccgggta ggagggtcct
      301 gggtcagcca gcgtcaagag ccccccgagg gagcatggga ccagctatga actctttgca
      361 gtaagctcag ttttagctta tgaaggaatt ttaagtaaac gttacttaat ctctacagac
      421 ggacattcag aagccttggt gagaagtgcc agcagctgcc cttgtctact ggagtttcag
      481 gattcttctg gcgccaaggc gaactcttct tggtacttgt gacaatacag atctttagga
      541 caaattcacc tgctgtgaat gctttgggca ggaggaaaag taaaaccttg gcagcagcca
      601 cgtagctgac cagaaagctc tcccgtgcta ctcgcttgcc cggacaccca gtcaggactc
      661 gggcgctgct cccgccgcac tcatcacaga ttgtttcctg tgcccggggg acctggcgtt
      721 tctggggtgc tcctgcgacc cttttcttct tctctgcgcc agagttctgt actcaggcag
      781 ttggatgacg tgaactttga gatggagttt gtcacctgtg aggggctggc tgcctttcca
      841 aggcctgttc tgtctgaagg gaccatctga aggacgtgtt tgtgtgtgga aaagagggca
      901 ccagcctgac ccgcatcctc caccatgttc ctgttgctgc cttttgatag cttgattgtc
      961 aacctcctgg gcatctccct gaccgtcctc ttcaccctcc tacttgtttt catcattgtc
     1021 cctgccgtct ttggagtgtc ctttggtatc cgaaagctgt acatgaaaac actgttaaag
     1081 atcttcgcgt gggctacctt gagaatggag agaggagcca aggagaagaa ccaccagctt
     1141 tacaagccct acaccaacgg aatcattgca aaagatccca cttctctgga agaagaaatc
     1201 aaagaaattc gtcgaagtgg tagtaacaag gctctggata agacaccaga gtttgagctc
     1261 tctgacatct tctacttttg ccggaaagga atggagacta ttatggatga cgaagtgaca
     1321 aagagattct cggcagagga gttggagtcc tggaatttgc tgagcagaac caattacaac
     1381 ttccagtata taagcctgcg gctgaccatc ctctgggggt taggagtgct gatccggtac
     1441 tgtttccttc tgccactcag gattgctctg gcattcacag ggattagcct cttggtagcg
     1501 ggcactaccg tggttggata cctgccaagt gggagattta aggagttttt aagtaaacat
     1561 gttcacttaa tgtgctaccg tatctgcgtg cgagccctca cggccatcat tacataccac
     1621 aacaggaaaa acagaccaag aaatggtggc atctgtgttg ctaaccatac gtcgcccatt
     1681 gatgtgatca tcttggccag cgacggctac tacgccatgg tgggacaggt gcacgggggc
     1741 cttatgggtg tgattcagag agcaatggtg aaagcctgcc cccatgtctg gtttgagcgt
     1801 tctgaagtga aagatcgcca cctggtggct aagagattga ctgagcatgt acaagataaa
     1861 agcaagttgc ccatcctcat cttcccagaa ggaacctgca tcaataacac atccgtgatg
     1921 atgttcaaaa agggaagctt tgagattgga gccactgttt atcctgttgc tatcaagtat
     1981 gaccctcagt ttggtgatgc cttctggaat agcagcaagt atggcatggt gacgtacttg
     2041 ctcagaatga tgaccagttg ggccattgtc tgcagtgttt ggtacctgcc tcctatgacc
     2101 agagagaaag aggaagatgc tgtgcagttt gctaacagag tgaagtccgc cattgcccgg
     2161 caaggaggac tggtggacct gctgtgggac ggtggattga agagggagaa ggtgaaggac
     2221 acgttcaagg aggagcagca gaagctgtat agcaagatga ttgtgggtaa ccatgaggac
     2281 cggagccggt cctgaacctc catcttgcgc tggccgaagc tgccacctct aaatcctgaa
     2341 gtgagccagc tgcagttgtg gctgccccag cctctgccat catccccgcc acccactgct
     2401 gcatcctaac agactctggc cctcaggctg tcctggactc caggactgga gtcttgagag
     2461 ctccatgggc tgcctgctgt cctctaacca gagtgctgct ggctggggct ccttgggaca
     2521 aaatgcctct tgttcctcta tagtgagcct ctaagaggag tgccattaaa gcagttctag
     2581 ctggtgagaa ggtgggccct gttcttgcct cgagaggatg tcgggtgtta ccgcgtaggg
     2641 acagccaccc tctggggaaa gttgggaaaa acacagccgc agtgggtgcc tctcagcctc
     2701 cagctaagag ctttgacaca ggacaaaaga actgtctaca ggagcgttca tttcattcgg
     2761 caagcggagt cccaagttcc tgtgttcctg cttatgaaga tcatcagagt atgagatagg
     2821 aaaaagccag tgggccctgg gctagcccca ggagtctttg attcagactc caggctgagc
     2881 ctgaatcccc cacatgactt gtctgtttaa tatgtctgtt tccctgtctg ttacatggaa
     2941 ttgcagggag agaaatggtg gtgatgccta cctcacaggg ttgttgtggg gactccagtg
     3001 ctagtgtgtg tgaagggaat gtgtgctgct ctcccaggga cagcgtcaga gagtgtggca
     3061 ggacaaggtc agagctacaa ctgctgccca ggattttaaa cttgtttgtg agtaaataaa
     3121 actggatggt aaatgaaaaa aaaaaaaaaa aaaaaaaaa
//
