LOCUS       XM_008770021            1763 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glycerol-3-phosphate acyltransferase 3
            (Gpat3), transcript variant X4, mRNA.
ACCESSION   XM_008770021
VERSION     XM_008770021.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008770021.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008770021.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1763
                     /gene="Gpat3"
                     /gene_synonym="AGPAT 10; Agpat9"
                     /note="glycerol-3-phosphate acyltransferase 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 12 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     7 samples with support for all annotated introns"
                     /db_xref="GeneID:305166"
                     /db_xref="RGD:1565703"
     CDS             390..1763
                     /gene="Gpat3"
                     /gene_synonym="AGPAT 10; Agpat9"
                     /codon_start=1
                     /product="glycerol-3-phosphate acyltransferase 3 isoform
                     X1"
                     /protein_id="XP_008768243.1"
                     /db_xref="GeneID:305166"
                     /db_xref="RGD:1565703"
                     /translation="MEGTDLVVKLLSTWLTLVGSLILLPSAFGLSLGISEIYMKILVK
                     TLEWATLRIEKGAPKESVLKSPASMGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKK
                     GLEAIVEDEVTQRFSSEELVSWNLLTRTNVNFHYISPKLTIVWVLGVLVRYCFLLPLR
                     VTLAFIGISLLIIGTTLVGQLPDSSLKNWLSELVHLTCCRICVRSLSGTIHYHNKQYR
                     PQKGGICVANHTSPIDVLILATDGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEI
                     KDRHLVTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIYPVAIKYN
                     PQFGDAFWNSSKYNLVSYLLRIMTSWAIVCDVWYMPPMTREEGEDAVQFANRVKSAIA
                     VQGGLTELPWDGGLKRAKVKDTFKEEQQKTYSKMIVGNGSPSLALDSSTVDNHGSPEP
                     AFRSESL"
ORIGIN      
        1 tctgtgctct gcgtacgtac ccaagagaag ctcagagtgg aatctcctct agggagggga
       61 gtgacaaaca gcctctaggg tgtcccgtcc tcccctcccc cagcccgctc accggttcgc
      121 cagccctttt aaagaaaggt ctataaagga tttacctata tagccctagg ctcactgctg
      181 gaactcaaaa caacccagac ccatctcttg atccttcagt cgcagattcc cgagtagctg
      241 aagagagcga ggcaggcggc gcagactccc cggagcccaa ctccggattg gacgctgtgt
      301 tttccgagct gcggctgaac tgccagggga ctccgacacc taccgcgctt ggctttcctg
      361 gggacctctc ccagagggct tgccgagaca tggaggggac agacctggtg gtgaagctcc
      421 tctccacctg gctgacgctg gtgggcagcc tcatcctttt gccctccgcc ttcggactat
      481 ccctgggcat ctcggagatc tacatgaaga tcctggtgaa aaccttggag tgggccacgt
      541 tacggatcga gaaaggagcc cctaaggagt cagttctcaa aagcccagct tctatgggta
      601 ttatccaaag agatgagtca cccatggaaa aagggctctc cggtcttcga ggaagggact
      661 tcgagctctc cgatgtgttt tatttctcca agaaggggtt ggaagccatt gtggaggatg
      721 aagtgaccca gaggttctcc tccgaggagc tagtatcatg gaatctcctc acaagaacca
      781 atgtcaactt tcactacatc agtccaaagc tcaccatcgt gtgggtgctg ggcgtcctcg
      841 tacgctattg cttcctgctc cctctgaggg tgaccctggc tttcattggg atcagcttgc
      901 tgattatagg aacaacactg gttggccagc ttccggacag cagcctcaag aactggctga
      961 gtgaactggt gcacctgacc tgctgcagga tctgtgttcg ctccctgtct ggcaccatcc
     1021 attaccataa caagcagtac agaccccaga agggaggcat ctgtgtcgcc aatcacacct
     1081 ctcccatcga tgtcttaatc ttggcgacgg atggatgtta tgccatggtt ggacaggttc
     1141 atggtggact gatggggatc attcagagag ccatggttaa ggcttgtcca catgtctggt
     1201 ttgagcgctc agaaataaag gaccggcatc tggtgactaa gaggttaaaa gaacacatcg
     1261 ctgataagaa aaagttaccc attctaatct tccctgaagg tacctgcatc aacaatactt
     1321 cagtcatgat gttcaaaaag ggaagctttg aaattggagg aaccatatat ccagtggcaa
     1381 taaagtataa ccctcagttc ggcgatgcct tctggaacag tagtaaatac aacctggtga
     1441 gctatttgct tcggataatg acaagctggg ccattgtctg cgatgtgtgg tacatgcctc
     1501 ccatgaccag agaggaagga gaagatgcgg ttcagtttgc caacagggtt aaatccgcta
     1561 ttgctgtgca aggaggactg actgaacttc cctgggacgg gggcctgaag agagcaaagg
     1621 tgaaggacac ctttaaggaa gaacaacaga agacttacag caaaatgatc gtgggcaacg
     1681 gatctcccag cctggccctg gactcaagca ctgtggacaa tcatggctcc ccagagccgg
     1741 ccttcagaag tgaaagctta taa
//
