LOCUS       NM_001034157            1407 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus G patch domain and ankyrin repeats 1 (Gpank1),
            mRNA.
ACCESSION   NM_001034157 XR_000319
VERSION     NM_001034157.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1407)
  AUTHORS   Bonaldo MF, Lennon G and Soares MB.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CK599826.1 and BX883045.1.
            
            On Nov 25, 2008 this sequence version replaced NM_001034157.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            CDS exon combination :: FQ213768.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMEA5760383, SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-651               CK599826.1         1-651
            652-797             BX883045.1         321705-321850
            798-1407            BX883045.1         322406-323015
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..1407
                     /gene="Gpank1"
                     /gene_synonym="Bat4"
                     /note="G patch domain and ankyrin repeats 1"
                     /db_xref="GeneID:415064"
                     /db_xref="RGD:1303304"
     exon            1..187
                     /gene="Gpank1"
                     /gene_synonym="Bat4"
                     /inference="alignment:Splign:2.1.0"
     exon            188..797
                     /gene="Gpank1"
                     /gene_synonym="Bat4"
                     /inference="alignment:Splign:2.1.0"
     CDS             190..1242
                     /gene="Gpank1"
                     /gene_synonym="Bat4"
                     /note="HLA-B associated transcript 4"
                     /codon_start=1
                     /product="G patch domain and ankyrin repeat-containing
                     protein 1"
                     /protein_id="NP_001029329.1"
                     /db_xref="GeneID:415064"
                     /db_xref="RGD:1303304"
                     /translation="MSKPSLITFTPATDSSDLWKDGQQQAQLEKPEPVLDGAAARAFY
                     EALIAEESGSPKPRRAEPTRERKRKRRRTTAREPVAAGVPRQGRALEDEDRVTQWILM
                     AAQNGDLTELRRLLEPQEAGGAGGNINARDAFWWTPLMCAARAGQGAAVRYLLGRGAA
                     WVGVCELGGRDAAQLAEEAGFPEVARMVRESRGETRSPENQNRSPPSSSQFCEDCGAY
                     FEDSNHRTSTAHLLSLSRRPQPSSLPLGVPTSSPGFRLLLRGGWEPGMGLGPRGEGRA
                     NPIPTVLKRDQEGLGYRSPTQPRVTHFAARDTRAVSGKERVPRVGTLSQRENRRREEK
                     DRAWERDLRLYMNLEF"
     exon            798..1407
                     /gene="Gpank1"
                     /gene_synonym="Bat4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttctccctc ctccccgtgc caggccaacc cactggaccc tggctctcct gccaggcccg
       61 cgacagagcg cgctcgggct ccggcatgcg cagaggtgtg gtgagggact taggtcgggt
      121 gtgcttagga cgcgctgagc tgtgcatacg gcgtgagaat ctagaccgcc ctgcgcgcta
      181 acctgagcca tgtccaagcc atccctcatc acattcactc cagccaccga ctccagtgac
      241 ctctggaaag atggtcaaca gcaagcacag ctcgagaaac cagagcctgt cctggatggg
      301 gccgcagccc gggctttcta tgaggctcta attgcagagg agagtggttc ccctaagccc
      361 cggagagccg aaccgaccag ggagagaaag aggaagagaa gaagaactac cgcaagggag
      421 cctgtagcag caggggtccc gagacaagga agagcacttg aggatgaaga cagggtgacc
      481 cagtggatcc tgatggcagc ccagaatggg gatctgacag aactccggag gctgctggaa
      541 ccccaagagg cagggggagc tggagggaat atcaatgctc gtgacgcctt ctggtggact
      601 cccttgatgt gtgctgctcg agcgggccag ggcgctgccg tgcgctatct cctgggccga
      661 ggggctgcct gggtaggagt ctgtgaactg ggaggcagag acgcggctca gctggcagaa
      721 gaagcaggct tccctgaggt agcccgcatg gtcagagaga gtcgtgggga gacaaggagc
      781 cccgagaacc agaaccgatc acccccctcc tcctcccagt tctgtgagga ctgtggtgcc
      841 tactttgaag actccaacca ccgcacatct actgctcacc tgctgtcact gtctaggaga
      901 ccccagccct ccagccttcc ccttggggta cccacttcca gtcctggctt cagactgctg
      961 ctgaggggtg gctgggaacc aggaatgggg ctaggacccc ggggtgaagg ccgtgccaac
     1021 cctattccca ctgtcctcaa gagggaccag gaaggactgg gctatagatc cccaacccaa
     1081 ccccgggtca cacactttgc agctcgggat acccgggctg tgtctgggaa agagagagtt
     1141 cctcgagtcg gcacgctgag tcagagggag aacagaaggc gagaagagaa ggaccgggcc
     1201 tgggagcgag atctaagact atacatgaac ctcgagttct gactgacaca gactggccct
     1261 cgtctgtcac tggctgggtg tgggcctctg acttggacac ttgggcttcc agacccttag
     1321 gccttggcta ccgggctctg cttttagaga aaagggttga gagttgggag ataaataaac
     1381 ttccctccct gtgtcgtgtt tactctc
//
