LOCUS       XM_006231626            3084 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glycerol-3-phosphate acyltransferase,
            mitochondrial (Gpam), transcript variant X2, mRNA.
ACCESSION   XM_006231626
VERSION     XM_006231626.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006231626.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006231626.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3084
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3084
                     /gene="Gpam"
                     /note="glycerol-3-phosphate acyltransferase,
                     mitochondrial; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 9 ESTs, 6 Proteins, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 42 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:29653"
                     /db_xref="RGD:61847"
     CDS             516..3002
                     /gene="Gpam"
                     /codon_start=1
                     /product="glycerol-3-phosphate acyltransferase 1,
                     mitochondrial isoform X1"
                     /protein_id="XP_006231688.1"
                     /db_xref="GeneID:29653"
                     /db_xref="RGD:61847"
                     /translation="MEESSVTIGTIDVSYLPNSSEYSLGRCKHTNEDWVDCGFKPTFF
                     RSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHR
                     GWLARRLSYILFVQERDVHKGMFATSITDNVLNSSRVQEAIAEVAAELNPDGSAQQQS
                     KAIQKVKRKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAAT
                     ETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFI
                     RRRLDETPDGRKDILYRALLHGHIVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSV
                     VVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKN
                     YGYVRVDFAQPFSLKEYLEGQSQKPVSAPLSLEQALLPAILPSRPDAAAAEHEDMSSN
                     ESRNAADEAFRRRLITNLAEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVED
                     FFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSV
                     FELNFYSNGVLHVFIMEAIIACSIYAVQNKRGSGGSAGGLGNLISQEQLVRKAASLCY
                     LLSNEGTISLPCQTFYQVCHETVGKFIQYGILTVAEQDDQEDVSPGLAEQQWNKKLPE
                     PLNWRSDEEDEDSDFGEEQRDCYLKVSQAKEHQQFITFLQRLLGPLLEAYSSAAIFVH
                     TFRGAVPESEYLQKLHRYLLTRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKQK
                     RASVLELSTTFLPQGSRQKLLEYILSFVVL"
ORIGIN      
        1 ctcatgcttt ggagcttgca attggctgac caagctcggc ctagcaggcc ttatctctgg
       61 ctgtttatta tttgatgaaa gagccttcct cctcctcctc cactgttgca aaaccatcct
      121 ggactgtttg ctgctgcccg tggcatttct ccggggttac agtcatgtac ccgaaggcct
      181 ccagcctcca gctacacgaa taagcctctg gaggagctgc tgaatcaccc ccaccccagg
      241 ctgtcttctg aagctgtctg gggatagctt tgctaatcaa ctgactggaa ataattccag
      301 acaccacatc aaggatacag agcctcgcaa aagatcaccc tgaacgaaat cagagggaaa
      361 gaaaagatat taaaccagcg gctctctcag ggagagagac taggggaatc ctagaagccg
      421 caagccaaag agctaggagc cgatttgaat ctttcgggga acaattatta aacaggagtt
      481 gactcatgtt ttgtttggga cttccacgtt gagtcatgga ggagtcttca gtgacaattg
      541 gcacaataga cgtttcttat ctgcccaatt catcagaata cagccttggc cgatgtaaac
      601 acacgaatga ggactgggtt gactgtggct tcaaacctac cttcttcaga tccgcaacgc
      661 tgaaatggaa ggagagcctc atgagccgga agaggccctt cgtgggaagg tgttgctatt
      721 catgcacgcc tcagagctgg gaaaggtttt tcaaccccag tatcccatct ctgggtttgc
      781 ggaatgttat ttatatcaat gaaactcaca caaggcaccg aggatggctg gcaagacggc
      841 tttcttacat cctttttgtt caagagcgcg atgtccacaa gggcatgttt gccaccagta
      901 tcactgacaa tgtactgaat agcagcagag tccaagaggc aattgctgaa gtggctgcag
      961 aattgaaccc ggatggatct gcccagcagc agtccaaagc catccagaaa gtgaaaagga
     1021 aagccaggaa gatccttcag gaaatggttg ctacagtctc ccccgggatg atcaggctga
     1081 ctggctgggt gttactaaag ctcttcaaca gcttcttctg gaacattcag attcacaagg
     1141 gtcaacttga gatggtgaaa gctgcaactg agacgaatct gccgctcttg tttctgccgg
     1201 tgcacagatc ccacatcgac tacctgctgc tcaccttcat cctcttctgc cacaacatca
     1261 aagctccata catcgcctcg ggcaacaacc tcaacatccc catcttcagt accttgattc
     1321 acaagcttgg gggctttttc ataagacgga ggcttgacga aactccagat ggacgcaaag
     1381 acattctgta cagagcgttg ctccatgggc atatagttga actcctccga cagcagcagt
     1441 tcctggagat cttcctggaa ggcacccgct cccgcagtgg caagacctcc tgtgcccggg
     1501 ccgggctcct gtcagtggta gtggatactc tgtcatccaa caccatccct gacatcctgg
     1561 tcatccctgt gggcatctcg tatgatcgga taatcgaagg tcactacaat ggtgaacagt
     1621 tgggcaagcc caagaagaat gaaagtctct ggagtgtggc aagaggcgtt atcagaatgc
     1681 tgcggaaaaa ctacggctat gtccgagtgg actttgcaca gccattttct ttgaaggaat
     1741 atttagaagg ccaaagtcag aaacctgtat ctgctcccct ctctttggag caagcactgt
     1801 taccagcaat ccttccttca agacctgatg ctgctgctgc cgaacatgaa gacatgtcca
     1861 gtaatgagtc gagaaacgcg gcagacgaag ccttccgaag gaggctgatc acaaacctgg
     1921 cggagcacat tctcttcacc gccagcaagt cctgcgctat catgtccacc cacattgtgg
     1981 cctgcctgct cctctacaga cacaggcagg gaatccacct ctccacgctg gtggaagact
     2041 tctttgtgat gaaggaggaa gtcctagctc gggattttga cctgggcttc tccgggaatt
     2101 cagaagacgt agtcatgcat gctattcagc ttctggggaa ctgtgtcaca atcacccaca
     2161 ctagcaggaa ggatgaattc tttattactc ccagcacaac tgtcccgtcc gtctttgaac
     2221 tcaacttcta cagcaatggg gtacttcatg tctttatcat ggaagccatc atagcttgca
     2281 gcatttatgc agtccagaat aagaggggtt ccggagggtc tgccggaggc cttggcaacc
     2341 tgatcagcca ggagcagctg gtgcggaagg ccgccagtct gtgctacctt ctctctaatg
     2401 aaggtaccat ttctctgccc tgccagacat tttaccaggt ttgtcacgag acagtaggaa
     2461 agttcatcca gtacggaatt ctcacagtgg cagagcaaga tgaccaggaa gatgtcagtc
     2521 ctggccttgc agagcagcag tggaacaaga agcttccgga gcctctgaac tggagaagtg
     2581 acgaagaaga tgaggacagt gactttggtg aggagcagcg tgattgctac ctgaaggtga
     2641 gccaggccaa ggagcaccag caattcatca cctttctgca gaggcttctg gggcccctgc
     2701 tagaagccta cagctctgct gccatctttg tccacacctt ccgcggcgca gtcccggagt
     2761 ctgagtacct gcagaagctg cacaggtacc ttctcaccag gacggagagg aacgtcgcgg
     2821 tgtacgctga gagtgccaca tactgtcttg tgaagaatgc tgtgaaaatg tttaaggaca
     2881 tcggggtttt caaagagacc aagcagaagc gagcgtctgt cttagaactg agcaccactt
     2941 tcctacctca gggcagccgg cagaagctcc tggaatacat tctgagcttc gtggtgctgt
     3001 agggttccct cagcacctat ctccgtgagg agctgatgag tcctttgcag actccagtct
     3061 gacccagagt ggcaagtttc ctgg
//
