LOCUS       NM_001004240            2043 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus glycosylphosphatidylinositol anchor attachment 1
            (Gpaa1), mRNA.
ACCESSION   NM_001004240 XM_235447
VERSION     NM_001004240.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Vainauskas S and Menon AK.
  TITLE     A conserved proline in the last transmembrane segment of Gaa1 is
            required for glycosylphosphatidylinositol (GPI) recognition by GPI
            transamidase
  JOURNAL   J Biol Chem 279 (8), 6540-6545 (2004)
   PUBMED   14660601
REFERENCE   3  (bases 1 to 2043)
  AUTHORS   Ohishi K, Inoue N and Kinoshita T.
  TITLE     PIG-S and PIG-T, essential for GPI anchor attachment to proteins,
            form a complex with GAA1 and GPI8
  JOURNAL   EMBO J 20 (15), 4088-4098 (2001)
   PUBMED   11483512
REFERENCE   4  (bases 1 to 2043)
  AUTHORS   Okajima T, Chen HH, Ito H, Kiso M, Tai T, Furukawa K, Urano T and
            Furukawa K.
  TITLE     Molecular cloning and expression of mouse
            GD1alpha/GT1aalpha/GQ1balpha synthase (ST6GalNAc VI) gene
  JOURNAL   J Biol Chem 275 (10), 6717-6723 (2000)
   PUBMED   10702226
REFERENCE   5  (bases 1 to 2043)
  AUTHORS   Inoue N, Ohishi K, Endo Y, Fujita T, Takeda J and Kinoshita T.
  TITLE     Human and mouse GPAA1 (Glycosylphosphatidylinositol anchor
            attachment 1) genes: genomic structures, chromosome loci and the
            presence of a minor class intron
  JOURNAL   Cytogenet Cell Genet 84 (3-4), 199-205 (1999)
   PUBMED   10393431
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC078984.1.
            
            On Sep 10, 2004 this sequence version replaced XM_235447.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC078984.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..2043
                     /gene="Gpaa1"
                     /note="glycosylphosphatidylinositol anchor attachment 1"
                     /db_xref="GeneID:300046"
                     /db_xref="RGD:1303197"
     exon            1..152
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     CDS             79..1944
                     /gene="Gpaa1"
                     /note="anchor attachment protein 1; GPI anchor attachment
                     protein 1; glycosylphosphatidylinositol anchor attachment
                     protein 1 homolog"
                     /codon_start=1
                     /product="glycosylphosphatidylinositol anchor attachment 1
                     protein"
                     /protein_id="NP_001004240.1"
                     /db_xref="GeneID:300046"
                     /db_xref="RGD:1303197"
                     /translation="MGLLSDPVRRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPL
                     TQRTYMSENAMGSTMVEEQFVGGDRARNFARDFAAHRKKPGALPVAWLERAMRSVGLE
                     VYTQSFSRKLPFPDETHERYMVSGTNVYGILRAPRAASTESLVLTVPCGPDTTNSQAV
                     GLLLALAAHFRGQIYWAKDIIFLVTEHDLLGTEAWLEAYHDINVTGIQSSPLQGRAGA
                     IQAAVALELSSDVVTSLDVTVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQD
                     WTSLEGPLQGLQTLLLMVLRQASGRPHGPHGLFLRYGVEALTLRGINSFRQYKYDLVA
                     VGKALEGMFRKLNHLLERLHQSFFFYLLPALSRFVSIGLYMPATGFLLLVLGLKALEL
                     WMQLHEAGVNPEEAGKAPGPGSPPLATQSVSLASLMAPLLISQAMGLALYFLPVLGQH
                     VAAQHFPVAEAEAVVLTLLAIYVAGLALPHNTHRVVSSQVPDRGWMALKLVALIYLAL
                     QLGCIALLNFSLGFLLAATMVPAAALTKPHGPRTLYAALLVVTSPAVTLFGSLFLWRE
                     LQEVPLSLAEGWQLFLTALAQGVLEHYTYGALLFPILALGLYPCWLLFWNVLFWK"
     exon            153..332
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     exon            333..444
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     exon            445..592
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     exon            593..694
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     exon            695..891
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     exon            892..1088
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     exon            1089..1242
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     exon            1243..1338
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     exon            1339..1529
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     exon            1530..1700
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
     exon            1701..2018
                     /gene="Gpaa1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cacggggcgc cgggtctgac aggaaccctg cgcttggagg tgtcaagctg cggcgagagc
       61 tgagccccgc gccccgccat gggtctcctg tcggacccgg tgcgccggcg cgcgctcgcc
      121 cgcatcgtct tgcgcctcaa cactcctcta tgtgtgctga gctacgtagc tggcatcgcc
      181 tggtttttgg cgctggcttt tccgccgcta acccagcgca cttatatgtc tgagaatgcc
      241 atgggctcca ccatggtgga ggagcagttt gtaggtggag accgtgcccg caacttcgcc
      301 cgggactttg ctgcccaccg caagaagcca ggggctctgc cagtagcctg gctggaaagg
      361 gcgatgcgat ccgtaggact ggaggtctac actcagagct tctcccgcaa actacccttc
      421 ccggatgaga cccatgagcg ctatatggtc tcgggtacca atgtgtatgg catcctgcgg
      481 gccccacgtg ctgccagtac cgagtccctg gtactcactg taccctgtgg tccagacacc
      541 accaatagcc aggctgtggg gttgttgttg gcactcgctg cccatttccg agggcagatt
      601 tactgggcca aagatataat tttcctggta acagaacatg atcttctggg cactgaggct
      661 tggcttgagg cctaccatga cattaatgtt acaggcatac agtcatctcc cctgcagggc
      721 agggctggtg ccatccaggc cgctgtggcc ctggagctga gcagtgatgt agtcaccagc
      781 ctcgacgtga ccgtggaggg actcaacggt cagctgccca accttgatct gctcaacctc
      841 ttccagacct tctgccagaa aggggggctg ttgtgcacac tccagggcaa gctgcagccc
      901 caggactgga catcactgga agggcctctg cagggcctgc agacactgct tctcatggtg
      961 ctgcggcagg cctctggccg gccccatggc ccccatggcc tcttcctgcg ctacggagtg
     1021 gaggccctaa ccctacgtgg catcaacagc ttccgccaat acaagtatga tttggtggca
     1081 gtgggcaagg ctctggaggg catgttccga aagctcaacc acctcctgga gcgcttgcac
     1141 cagtcgttct tcttctacct actgcccgcc ctctcccgct tcgtgtccat tggactctac
     1201 atgcccgcca caggcttcct gctcctggtc cttggactca aggctctcga gctatggatg
     1261 cagttacacg aggctggagt gaaccctgag gaggctggga aggcccctgg ccccggctct
     1321 ccacccttgg caacacagag cgtgagcctg gcctcactta tggcgccctt gctgatctct
     1381 caggccatgg gtttggccct ctatttccta cctgtgctgg gccaacatgt agctgcccag
     1441 catttcccag tggctgaagc tgaggctgtc gtgttgacac tgctagcgat ttatgtagcc
     1501 ggcctagccc tgccacacaa cacccaccga gtggtcagct cacaggtccc agaccggggc
     1561 tggatggcgc tgaaactggt ggccctgatc tacttggcac tgcagctggg ttgcattgct
     1621 ctcctcaatt tctccctggg cttcctgctg gctgccacca tggtacctgc tgctgcactc
     1681 acgaagcccc acggaccccg gacactctat gctgccctgc tggtagtgac cagcccagca
     1741 gtcacactct tcggtagcct attcctgtgg cgggagctcc aggaggtacc actgtctctg
     1801 gcagagggtt ggcagctctt cctgactgcc ttggcccagg gtgtgctgga acactacacc
     1861 tatggtgccc tcctcttccc aatactggcc ttgggtctgt atccttgctg gctgctcttc
     1921 tggaatgttc tcttctggaa gtgaggtctc tgggaaggga accccaagcc tccattctac
     1981 ctcctccctg gaaaataaac aagtgctctg tttctgtaaa aaaaaaaaaa aaaaaaaaaa
     2041 aaa
//
