LOCUS       NM_001014003            1366 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus glutamic-oxaloacetic transaminase 1-like 1
            (Got1l1), mRNA.
ACCESSION   NM_001014003 XM_006253291 XM_224942
VERSION     NM_001014003.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1366)
  AUTHORS   Matsuda,S., Katane,M., Maeda,K., Kaneko,Y., Saitoh,Y., Miyamoto,T.,
            Sekine,M. and Homma,H.
  TITLE     Biosynthesis of D-aspartate in mammals: the rat and human homologs
            of mouse aspartate racemase are not responsible for the
            biosynthesis of D-aspartate
  JOURNAL   Amino Acids 47 (5), 975-985 (2015)
   PUBMED   25646960
  REMARK    GeneRIF: The rat and human homologs of mouse GOT1L1 are not
            involved in D-aspartate biosynthesis.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On or before Apr 13, 2021 this sequence version replaced
            XM_006253291.4, NM_001014003.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.75290.1,
                                           SRR26360181.1028928.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-184               JAXUCZ010000016.1  71563562-71563745
            185-366             JAXUCZ010000016.1  71565499-71565680
            367-478             JAXUCZ010000016.1  71566068-71566179
            479-588             JAXUCZ010000016.1  71566433-71566542
            589-681             JAXUCZ010000016.1  71566861-71566953
            682-832             JAXUCZ010000016.1  71567050-71567200
            833-998             JAXUCZ010000016.1  71567930-71568095
            999-1141            JAXUCZ010000016.1  71568413-71568555
            1142-1366           JAXUCZ010000016.1  71568792-71569016
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.3"
     gene            1..1366
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /note="glutamic-oxaloacetic transaminase 1-like 1"
                     /db_xref="GeneID:306540"
                     /db_xref="RGD:1307172"
     exon            1..184
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /inference="alignment:Splign:2.1.0"
     CDS             70..1284
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /EC_number="2.6.1.1"
                     /codon_start=1
                     /product="putative aspartate aminotransferase, cytoplasmic
                     2"
                     /protein_id="NP_001014025.2"
                     /db_xref="GeneID:306540"
                     /db_xref="RGD:1307172"
                     /translation="MTSLSVFRDVPIAQKLEGSLLKIYRQDDSSVKMFLAYKVCMTEG
                     GHPWVSLVVRKTRLQIAEDPSLNYEYLPLAGLKSFIQASLELLFGKHSQAIVEKRVGG
                     VHIVGESGAFQLGAQFLKIWRKNLKTVCIISCQNEQCGLIFRDMGFTVYEYSVWNSTD
                     LCSDPSIFVEVLQHIPAGSILVIGNISDCRFTQNQWTKLMSIIKSKQIFPFFDIPCQG
                     LSTGDLEEDSKFLQHFVSLGFEFFCSQSLSKNFGIYDEGVGILVVAALSNQHLLCVIS
                     QLMDYVQALWGNPPATGARIITSILCNPALFGEWKQSLKGVVENIMLIKEKVKEKLRL
                     LGTPGSWNHITRQSGTHGYLGLNYQQVEFLVKKKHIYLPKTSRINFTCINSSNIDYIT
                     QSIHEAVMLTEG"
     exon            185..366
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /inference="alignment:Splign:2.1.0"
     exon            367..478
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /inference="alignment:Splign:2.1.0"
     exon            479..588
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /inference="alignment:Splign:2.1.0"
     exon            589..681
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /inference="alignment:Splign:2.1.0"
     exon            682..832
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /inference="alignment:Splign:2.1.0"
     exon            833..998
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /inference="alignment:Splign:2.1.0"
     exon            999..1141
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /inference="alignment:Splign:2.1.0"
     exon            1142..1366
                     /gene="Got1l1"
                     /gene_synonym="RGD1307172"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttgcatcag agctaccacg gttctggaag aaagaggcct gaagttattg gtattatata
       61 tgctcaacta tgaccagcct ttctgtgttc agggatgtac ccatagccca gaagctagaa
      121 ggcagcttac taaagatcta taggcaagac gactcttctg tcaagatgtt cctggcctac
      181 aaagtctgca tgaccgaagg aggccatccc tgggtttctc ttgtggtgcg caagacccgc
      241 ctgcagattg cagaagatcc ctctctgaac tatgagtact tgcccctcgc gggcctgaaa
      301 tccttcatcc aagcctctct ggaacttctc tttggaaagc acagccaagc cattgtggag
      361 aaaagggtag ggggcgttca catcgttggt gagagtggag ccttccagct tggggctcag
      421 ttcctcaaga tatggcgaaa gaacttgaaa accgtttgta tcatctcatg tcaaaacgaa
      481 cagtgtggac tcatcttccg ggacatgggc tttacagttt atgagtactc ggtctggaac
      541 tccactgatc tgtgctcaga ccccagcata ttcgtcgaag ttctacagca tatcccggct
      601 ggcagcatcc ttgtgattgg gaacatctct gactgccggt tcacacagaa tcagtggaca
      661 aagttgatgt ccatcattaa gagcaagcag atattcccat tctttgacat tccctgccaa
      721 ggtttatcca ctggggacct tgaagaagat agcaaattct tacagcactt tgtgtctcta
      781 ggcttcgaat tcttttgcag ccaatctctg tccaagaatt ttggcattta tgatgaagga
      841 gtagggatcc tagtcgtggc agccctcagc aaccagcacc tgctgtgtgt catctcccag
      901 ctgatggatt atgtccaggc cctgtgggga aaccctcctg ccacgggtgc tcgaataatc
      961 acctccatcc tctgtaaccc tgctctgttt ggagaatgga agcagagtct aaaaggtgtt
     1021 gtggagaaca tcatgctgat caaggagaag gtgaaggaga aactccgact cctggggacc
     1081 cctgggtcgt ggaatcacat cacccgacag agcggaaccc atggttatct gggactcaac
     1141 tatcaacagg tggagttcct ggtcaagaag aagcatatct acttgcccaa gaccagccgg
     1201 atcaacttca cctgcattaa cagcagcaat atagactaca tcactcaaag catccatgag
     1261 gctgtgatgc taaccgaggg ctgagagggt gtcttctcaa aactggccct gattggaatg
     1321 aaagctttgc gtcgtctttg ggaataaaag tcctgaggga actgtt
//
