LOCUS       XM_039096416            3908 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus golgi membrane protein 1 (Golm1),
            transcript variant X5, mRNA.
ACCESSION   XM_039096416
VERSION     XM_039096416.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096416.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3908
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3908
                     /gene="Golm1"
                     /note="golgi membrane protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 46
                     ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 57 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:680692"
                     /db_xref="RGD:1589384"
     CDS             308..1759
                     /gene="Golm1"
                     /codon_start=1
                     /product="Golgi membrane protein 1 isoform X1"
                     /protein_id="XP_038952344.1"
                     /db_xref="GeneID:680692"
                     /db_xref="RGD:1589384"
                     /translation="MMGLGNGRRSMKSPPLILAALVACVIVLGFNYWIASSRSVELQT
                     RIVELEGRVRRAAAERGAVELKKNEFQGELQKQREQLDRIQSSHSFQLENVNKLHQDE
                     KAVLVNNITTGEKLIRDLQDQLKALQKSYGRLQQDIFQFQKNQTSLEKKFSYDLSQCI
                     SQMKEVKEQCEERIEEVVRKRNEALVSRDDQRQQALKPQAKLQETVPPKEQTPQEEGD
                     VPRNKSQVPAPSSEVWGLKPHVQNEETNEIQVASEEHGLQLMKASIQEQAAVDGTRVG
                     AEKLDQNIQVPGALLARPEEDSQFPERDQLVIRGGQESQHDQLVVRGGQESQRDQLVF
                     RGGQESQRDQLVFRGGQESQRDQLVVRGGQESQHDQLVVRGGQESQHDQLVVRGGQES
                     QHDQLVVRGGQELQRAAEEGGDQQNLGDDYNLNENEAEPEREKQAALAGDDRNLSVLN
                     AEAQKRGIIDLPDGGEKRSHILNEVGVHVPQQA"
ORIGIN      
        1 gccgcccgcc tctctgctcc ggcttctcgc ctctcggccg ccgcctcctc ccctcgcctc
       61 ccccgcttct ccgtccctcc ctcctcgtcc tctttctctc ctccgactgt cttccctggt
      121 cctcgccttc ctttgtctcc ccctcctcct gccccctccc gcccgagcag accctgcaaa
      181 gtggcccccg agacctccgg gtccagggtc ggtccccagt cacccgcagc tgcagccggc
      241 tttctaggat gctccttggc aaggcagaac acccgagcaa cttttggttc tcagccctgg
      301 ttccaagatg atgggattgg gaaatgggcg tcggagcatg aagtctccac cccttatcct
      361 ggctgccctg gtggcctgtg tcatcgtcct cggcttcaac tactggattg ccagctccag
      421 aagcgtggaa ctccagacac gcatcgtaga gctggaaggc cgggtccgca gggcagctgc
      481 agagcgaggt gccgtagagc tgaagaagaa cgagtttcag ggcgagctgc agaagcagcg
      541 agagcaactt gacaggatcc agtccagcca cagcttccag ctggagaacg tcaacaagtt
      601 acaccaggac gagaaggcgg ttttagtgaa taatatcacc acaggcgaga agctcattag
      661 agaccttcaa gaccagttga aggcactgca gaagagttat ggcaggctgc agcaggacat
      721 cttccagttc cagaagaacc agaccagcct ggagaagaag ttctcctatg acctgagcca
      781 gtgtatcagc cagatgaagg aggtgaagga acagtgtgaa gagcggatag aagaggttgt
      841 cagaaagcga aatgaggcat tagtttccag agatgaccaa cgacagcagg ccctcaagcc
      901 tcaggccaag ttgcaggaaa cagttccgcc aaaggagcag acgccacaag aggaagggga
      961 tgtgcccaga aacaagtccc aagtaccagc ccccagttca gaggtgtggg gcttgaagcc
     1021 acacgtgcag aacgaggaaa ccaatgagat tcaggttgcc agtgaggagc atggtctgca
     1081 actgatgaaa gcctccatcc aagagcaggc ggcagtggat ggcacacgtg tgggagctga
     1141 gaaacttgat cagaacatac aggtgccagg agccctgtta gccaggcctg aggaggattc
     1201 tcagttccct gagcgggacc agcttgtcat ccgtggtgga caggagtcgc agcatgacca
     1261 gcttgtcgtc cgtggtggac aggagtcgca gcgtgaccag cttgtcttcc gtggtggaca
     1321 ggagtcgcag cgtgaccagc ttgtcttccg tggtggacag gagtcgcagc gtgaccagct
     1381 tgtcgtccgt ggtggacagg agtcgcagca tgaccagctt gtcgtccgtg gtggacagga
     1441 gtcgcagcat gaccagcttg tcgtccgtgg tggacaggag tcgcagcatg accagcttgt
     1501 cgtccgtggt ggacaggagc tgcagcgtgc tgcagaagaa gggggagacc agcagaatct
     1561 aggcgatgac tacaacctga atgagaatga agcagagccc gagcgggaga agcaggcggc
     1621 cctggcaggg gatgacagga atctaagtgt tcttaatgct gaagctcaga agagaggcat
     1681 aatagattta cctgatgggg gtgaaaagcg gagtcacatt ctaaatgaag taggagttca
     1741 tgttcctcag caagcctgaa gagaggtcta tggagattca ccagtgacac aactgtgaaa
     1801 cgtaccaagt aaaacggaca tcgaccaatc attgctgtgg ggtttaatca gtacatttta
     1861 gcaaagaaaa ataatagcac catctcagac agtttgggag tactttcaaa gtgtctacaa
     1921 aaggtgtcaa agttggtcaa gctttcttga ttaacgggta tttcttgagc caggtcaaca
     1981 ccaaaaagag aaatgatgtt gtcctatgta ggtggcagtg tagacagtgt aggctgagtg
     2041 cagtgctcgc ccgtttctgt ccatggtact gagcagctca acactgctgc acactgactc
     2101 ccccatcaat ggcctggaga gctcactgtc aacacagacg ccacagtcgg tgttcacagg
     2161 cctaagcaca aagctattct gtgcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaatccagt
     2221 aattagaagg tgaccactac tcctggttca cttcaggatt cagaaggctg aggcaggaag
     2281 gctgctgcaa gttctgagcc agcttagagc tatacagtga gtccaggtcc acgcttggat
     2341 gagcaagaaa gaaaatccct gtctcaaatg ttagtgagag ttgttgttta aaaagactgg
     2401 ttaaaataac cttcattatt cttctgacgt acagaacact attaagttac tcacagtgtg
     2461 agcacctgag gtctgttttt tgcttgactg ggcaaagagt ttctagtaag tcattcatct
     2521 cattaagggc agcgccttca ttaggctctg gacaaaggct gcttgggcag tcagagcaga
     2581 ggcccagaca cctatgtcta cacaggtgtc caagaagaag ggctgactgc tggaggacgc
     2641 ccagatttca agctggacac ctacaaaagc aagagcaaca caggcgctgt tccccctgta
     2701 gtttatacag tgtttgaaag ccacacaagg ttagtgttag gtttgaaagg cttgtagttc
     2761 attgatggtg ggccagtgca cagggctggg ctgacccaga agtctggtta gactagggcc
     2821 tgccagggtg ggctttaggc gctgtcctat ccccactatg cctctcttta caagcacaca
     2881 cttaaacccc cgtggcaggc gtgggttggg ttgtgtctta ttgcaaagcc aagcagatct
     2941 agtgcccatt ccacctagac ctcatgtaca acctcatgtt cagatgggta ctgtccaatg
     3001 ccacacatca tttttccttc acacttacta acttgccaga gcctcagaca tactgtgttc
     3061 gtaccataca cctttcccac tcctaggtcc aagctcaagg agattttgtg ctttctagtg
     3121 cttgttttct gccttaattt cacttttgtt taaagtgtag atactgctat ttccttttta
     3181 acaagtcaaa taggtaagga ccacactctg ccttctgggt tctaaaactc cagtctgcct
     3241 aacagccatg cttgacagct gagcagacca ccctggtgct gcccaggagt aagcaacgct
     3301 tgccttcact cgcatcttca acgagcagag tcgggcatgc ttcatgcttc agagtatttc
     3361 tggggagtgg aagctgtcag ggggctgggc aaggcatagc tccgtgagag cttctgcctg
     3421 tgtgtgaggg aggccctggg ctgcgtcctc accaccaaac agtgtcacac tagagttagg
     3481 ccactgaaac cttaggacca ttcttgctgt aagccaaatg aactaccact aggcttaggc
     3541 caaaccacaa agccagactg aattttaggg tagcttactc tgctggaagc actgcccctt
     3601 cagaatataa aagggaaacc ccacaggttg gtggaccaag aacagacctc aatgggaaca
     3661 aagggccaca ccatggtcaa atgagaccca aagccagcgg cctgcacact cctgcatgct
     3721 gacagtagta gcggacactg cagtgtaacg gggtttctcg tcaactgcac gaatgactac
     3781 agaccctaac aactgtgtca caacagtcac aatcctcgcg cactttaggg atcctcttgc
     3841 ctcaaaatca acttgtaatt tgaccagaat ctaaatcttt aaataaacct catgttttga
     3901 aacttaaa
//
