LOCUS       NM_001107847            5719 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus golgin A3 (Golga3), mRNA.
ACCESSION   NM_001107847 XM_001078840 XM_231418
VERSION     NM_001107847.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5719)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5719)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 5719)
  AUTHORS   Ohta,E., Misumi,Y., Sohda,M., Fujiwara,T., Yano,A. and Ikehara,Y.
  TITLE     Identification and characterization of GCP16, a novel acylated
            Golgi protein that interacts with GCP170
  JOURNAL   J Biol Chem 278 (51), 51957-51967 (2003)
   PUBMED   14522980
REFERENCE   4  (bases 1 to 5719)
  AUTHORS   Bray,J.D., Chennathukuzhi,V.M. and Hecht,N.B.
  TITLE     Identification and characterization of cDNAs encoding four novel
            proteins that interact with translin associated factor-X
  JOURNAL   Genomics 79 (6), 799-808 (2002)
   PUBMED   12036294
REFERENCE   5  (bases 1 to 5719)
  AUTHORS   Bell,A.W., Ward,M.A., Blackstock,W.P., Freeman,H.N.,
            Choudhary,J.S., Lewis,A.P., Chotai,D., Fazel,A., Gushue,J.N.,
            Paiement,J., Palcy,S., Chevet,E., Lafreniere-Roula,M., Solari,R.,
            Thomas,D.Y., Rowley,A. and Bergeron,J.J.
  TITLE     Proteomics characterization of abundant Golgi membrane proteins
  JOURNAL   J Biol Chem 276 (7), 5152-5165 (2001)
   PUBMED   11042173
REFERENCE   6  (bases 1 to 5719)
  AUTHORS   Fritzler,M.J., Hamel,J.C., Ochs,R.L. and Chan,E.K.
  TITLE     Molecular characterization of two human autoantigens: unique cDNAs
            encoding 95- and 160-kD proteins of a putative family in the Golgi
            complex
  JOURNAL   J Exp Med 178 (1), 49-62 (1993)
   PUBMED   8315394
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473973.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_231418.4, XM_001078840.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..5719
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..5719
                     /gene="Golga3"
                     /note="golgin A3"
                     /db_xref="GeneID:312077"
                     /db_xref="RGD:1305262"
     exon            1..339
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            340..658
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     CDS             523..4866
                     /gene="Golga3"
                     /note="golgi autoantigen, golgin subfamily a, 3"
                     /codon_start=1
                     /product="golgin subfamily A member 3"
                     /protein_id="NP_001101317.1"
                     /db_xref="GeneID:312077"
                     /db_xref="RGD:1305262"
                     /translation="MDGASAKQDGLWENKSSSDISSCPEASLETVGSLAQLPDQQDTA
                     QDGSVEVNRVFKEEGSPDRSSQVPICQNGQIPDLQLSLDPTTSPVGPDASTGSTASSL
                     PLEKEEQVRLQARKRLEEQLMQYRVKRHRERSSQPATKMKLFSTLDPELMLNPENLPR
                     ASAVAVTKEYSFLRTSVPRGPKVGSLGLLAHSKEKKNSKSSKIRSLADYRTEDPSDSG
                     GLGSTADAVGSSLKQSRSSTSVVSEVSPSCETDNRAESASLAGDSVSEADGNESDSSS
                     HSSFSARGACAVLGNVGTPGAAYVVDGQEISAEALGQFPSIKDVLQAAAAQHQDQNQE
                     ANGEVQSRRDSICSSVSMESSFAEPQEELLQILKDKRRLEGQVEALSLEASQALQEKA
                     ELQAQLAALSTRLQAQVEHSHSSQQKQDSLSSEVDTLKQSCWDLERAMTDLQNMLEAK
                     NASLASSNNDLQVAEEQYQRLMAKVEAMQRNILSKDNTVHDLRQQMTALQSQLQQVQL
                     ERTTLTSKLQASQAEITSLQQARQWYQQQLALAQEARVRLQGEMAHIQVGQMTQAGLL
                     EHLKLENVSLSHQLTETQHRSIKEKERIAVQLQSIEADMLDQEAAFVQIREAKTMVEE
                     DLQRKLEEFEGEREQLQKVADAAASLEQQLEQVKLTLFQRDQQLAALQQEHLDVIKQL
                     TSTQEALQAKGQSLDDLQTRYDELQARLEELQREADSREDAIHFLQNEKIVLEVALHS
                     ARSDKEELDRGARRLEEDTEETSGLLEQLRQDVAVKSNQVEHLQQETATLRKQMQKVK
                     EQFLQQKVMVEAYRRDAASKDQLINELKATKKRLDSEMKELRQELIKLHGEKKTVEVE
                     HSRLQKDMSLVHQQMAELEGHLQSVQKERDEMEIHLQSLKFDKEQMIALTEANETLKK
                     QIEELQQEAKKAITEQKQKMKRLGSDLTSAQKEMKTKHKAYENAVSILSRRLQEALAN
                     KEATDAELNQLRAQSTGGSSDPALHEKIHALEVELQNVGQSKILLEKELQEVITMTSQ
                     ELEESREKVLELEDELQESRGFRRKIKRLEESNKKLALELEHERGKLTGLGQSNAALR
                     EHNSILETALAKREADLVQLNLQVQAVLQRKEEEDRQMKQLVQALQISLEKEKTEVSS
                     LKEQMAAARVEAGHNRRHFKAATLELSEVKKELQAKEHLVQTLQAEVDELQIQEGKHS
                     QEIAQFQTELAEARTQLQLLQKKLEEQRSQQPTGSQEMEDLKWELDQKEREIQSLKQQ
                     LDLTEHQGKKELEGTQQTLQTIKSELETVQEDLSETQKDKFMLQAKVSELKNNMKTLL
                     QQNQQLKLDLRRGAAKKKEPKGESSSSSPATPIKIPDCPVPASLLEELLRPPPAVSKE
                     PLKNLNSCLQQLKQEMDSLQRQMEEHTITVHESLSSWAQVEAAPAEHAHARGDTKVHN
                     QNSVPGEGLGQ"
     exon            659..808
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            809..921
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            922..1568
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            1569..1680
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            1681..1987
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            1988..2190
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            2191..2328
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            2329..2490
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            2491..2859
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            2860..2937
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            2938..3201
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            3202..3296
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            3297..3513
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            3514..3657
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            3658..3855
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            3856..3972
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            3973..4112
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            4113..4245
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            4246..4368
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            4369..4530
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            4531..4694
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
     exon            4695..5719
                     /gene="Golga3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggatcctgg cgagtcctgg ttacgtcact gccgccggaa gcactttttt cgggggggag
       61 gggagtctga gttggtcctt taggctggaa gttgtttctc tgaagggaag gcacgcaaaa
      121 ttttagggcc agtttctgaa ggatacctca gttctgttcg aagatccgta ccaaccctaa
      181 ttcgatagtg gctactggtc gcagaggact gcttgtcttc cggaacgaag acatcgcata
      241 cagtttgttt ccgggcggtt gcccgagact ggtgccctgt tgcgccccgc cccttgcacg
      301 gccacgtcct accggagccg cagggttggg ccgctacggg aatcatggta ttgcttggtt
      361 tgacttcaag ccatttatga gactttaaac cttaccctga aaatggaaaa cagagtaaga
      421 tccttcttag aagctctgag ctgttgctga tggcaaaaag caaacttaat ccagagttac
      481 ctgtagctcc tcagagtctt cttagtctgg gctgccctga ccatggatgg agcatcagcc
      541 aaacaggatg gcctctggga aaacaagtct agcagtgata tttcatcttg ccctgaagcc
      601 tcactggaaa ctgtgggctc tttggcccaa ctgcctgacc aacaagatac agctcaggat
      661 ggcagtgttg aggtaaacag agtttttaag gaagaaggaa gcccagacag atccagccag
      721 gtgcccatct gtcagaatgg gcagatccca gaccttcagt tgtctcttga tcccacaaca
      781 agcccagtgg gacctgatgc ctctacaggc tctactgcat cttcactgcc cttggaaaag
      841 gaggagcagg tccgactgca ggcccggaag cgcctggaag agcagctgat gcaataccga
      901 gttaagcgcc atcgggaaag gtccagtcag ccggcaacta aaatgaaact ttttagtaca
      961 cttgatcctg agctcatgtt aaatccagaa aacttgccaa gggccagtgc tgtagctgtg
     1021 acaaaagaat attccttcct gcgtaccagt gttcctcggg ggcccaaggt aggcagctta
     1081 gggctgctgg cacattctaa agagaagaag aattccaagt caagcaagat tcggtctctg
     1141 gctgactata gaactgaaga tccaagtgac tctggtggcc ttggttctac tgctgatgct
     1201 gttggaagtt ccctgaaaca gagtagaagt agcacttcag ttgtgtctga agtgagccca
     1261 tcatgtgaga ctgataaccg tgcagagagt gcctcactgg ctggggacag tgtgtcagag
     1321 gctgatggaa atgagagtga cagttcctca cacagcagct tctctgcccg aggggcctgt
     1381 gctgtcctgg ggaatgtcgg cacaccagga gcagcttacg tggttgatgg ccaggagatt
     1441 tctgctgagg ccctgggcca gtttccttcg attaaagacg tgctacaggc tgcagcagcc
     1501 cagcaccaag atcagaacca ggaagccaat ggggaggtgc agagccgcag agacagcatc
     1561 tgcagcagtg tgtccatgga gagctctttt gctgaaccac aggaagaatt gttgcagatc
     1621 cttaaagata agaggagact tgaaggacag gtggaggctt tgtcattaga agccagtcag
     1681 gcacttcaag agaaggctga gctacaggcc cagcttgctg ccctgagcac aaggctacag
     1741 gcacaggtgg aacacagtca cagcagccag cagaagcaag actcccttag ttctgaagtg
     1801 gacactttga agcagtcttg ctgggatttg gagcgggcta tgactgacct gcagaacatg
     1861 ctagaagcta aaaatgccag cctggcatcg tcaaacaatg acctacaagt ggcagaggag
     1921 cagtatcaga gactgatggc caaagtggag gccatgcaga gaaacatcct tagcaaggac
     1981 aacacagttc atgacctgcg gcagcagatg acagcgctac agagccagct ccagcaagta
     2041 cagctggagc gcacaacact gaccagcaaa ctacaagcat cacaggctga aatcacttct
     2101 ttgcagcagg cccggcagtg gtaccaacag cagcttgctt tggcccagga ggccagagtc
     2161 aggctgcaag gagagatggc ccacatccag gtcggacaga tgactcaagc gggccttttg
     2221 gagcacctga aacttgagaa tgtgtcccta tcgcatcagc taacagaaac tcagcacaga
     2281 tccatcaagg aaaaagagcg catagctgtt cagctccaga gcattgaggc tgacatgtta
     2341 gatcaggagg cagcatttgt acagattcgg gaggcgaaga caatggtgga agaagacctc
     2401 caaaggaagc tggaagaatt tgaaggtgaa cgggaacagt tacagaaagt ggcggatgca
     2461 gcagcgtccc tggagcaaca gttggaacag gtgaagttga cattgttcca gcgagatcag
     2521 cagctggcag cacttcagca ggagcatcta gatgtgataa agcagcttac atcgacacag
     2581 gaggctctac aggccaaagg gcagtccctc gatgacctgc aaacacgtta tgatgagcta
     2641 caagcaaggc tggaagagct gcagagagag gctgactcca gggaggatgc cattcacttc
     2701 ttgcagaatg agaagattgt cttagaagtg gctctgcact cagccaggag tgacaaggag
     2761 gaacttgaca gaggagcacg gcgtttggaa gaagatactg aggagacatc aggactttta
     2821 gaacaattga gacaagatgt ggctgtcaag tccaaccagg tggaacactt gcagcaagag
     2881 acagccacat tgagaaaaca gatgcagaaa gtaaaggagc agtttcttca gcaaaaggtg
     2941 atggtagagg cctatcggcg agatgctgct tctaaagacc aactcatcaa tgagctgaaa
     3001 gctaccaaaa aacgcctgga ctcagagatg aaggaactga ggcaggagct gatcaagctg
     3061 catggagaga agaagactgt ggaagtagag cactcacggc tgcagaagga catgtccctg
     3121 gttcaccagc agatggcaga gcttgagggg catctccagt cggtgcagaa agagcgagat
     3181 gaaatggaga ttcacctgca gtctttgaag tttgacaaag agcagatgat agcccttact
     3241 gaggccaatg agacactaaa gaaacaaata gaggagctgc agcaagaggc caagaaggcc
     3301 atcacagaac agaagcagaa gatgaagcgg ctgggctcag atctgaccag tgcccagaag
     3361 gagatgaaga ctaagcacaa ggcttacgag aatgctgtga gcattctcag ccgtcgccta
     3421 caggaggctc tggctaacaa ggaggccaca gatgcggagc tgaaccagct cagagctcag
     3481 agcacaggtg gcagcagtga ccctgctcta catgagaaga ttcatgctct ggaggtggaa
     3541 ctgcagaatg ttggccaaag caaaatactg ctggagaagg agttacagga ggtgatcacg
     3601 atgactagcc aggagttgga agagtcccgg gagaaggtgc tggagctcga ggatgagctt
     3661 caagaatcca gaggcttcag aaggaagata aaacgtcttg aagagtcaaa taagaagcta
     3721 gctctggagt tagaacatga gcgagggaag ctcaccggcc ttggacaatc taatgcggct
     3781 ttgcgggagc acaacagcat tctggaaact gcactagcca agagggaagc tgacctggtg
     3841 cagctgaatc tccaggtgca ggcagtttta cagcgcaaag aggaggagga tcgccagatg
     3901 aagcaacttg tccaagcctt acaaatctca ttagagaaag aaaagacgga agtgagcagc
     3961 ctgaaggaac agatggctgc tgccagggta gaagctgggc acaaccgccg ccactttaag
     4021 gcagcgactt tggagctgag tgaggtgaag aaagaattgc aggccaaaga acacctggta
     4081 cagacactgc aggccgaggt ggatgagctc cagattcagg agggaaagca ttctcaagaa
     4141 atcgctcaat tccagactga gctggcagaa gctaggaccc agctccagct cctgcagaag
     4201 aagctcgaag aacagaggag ccagcaacca acagggagcc aagagatgga agatctcaaa
     4261 tgggaattgg atcagaaaga acgagagatt cagtccctga agcagcagct tgacttgaca
     4321 gagcaccagg gcaagaaaga actcgagggt acacaacaga cactgcagac tatcaagtct
     4381 gagttggaaa cggttcagga agatctgtct gagacccaga aggataagtt tatgcttcaa
     4441 gccaaagtgt ctgaactgaa gaacaacatg aagactctgc tgcagcagaa ccaacagctc
     4501 aagctggatc tccgccgcgg tgcagccaag aagaaagagc caaaaggtga gtccagctca
     4561 tccagtccag caacacccat caagatacca gactgccctg tcccagcctc actgctggag
     4621 gagctgctga ggcccccacc cgctgtgagc aaggagcccc tgaagaatct caacagctgt
     4681 ttgcagcagc tcaagcagga aatggacagt ctacagcgcc agatggagga gcataccatc
     4741 actgtgcatg agtccctgtc ctcgtgggct caggtggaag ctgccccagc agagcatgcc
     4801 catgcccggg gagacacaaa agtacacaat caaaacagtg ttcctggaga agggctgggc
     4861 caatgaccac tgttgtcctt atcaccaagt atttgtggct gttgaaggaa tactcttgtc
     4921 aatattattt atttgattga atgctctggt ggctttcttt ttttttcgtt ttttaagaaa
     4981 ttacttaaat ttcccttcac tttttatcaa ggattaaaat aacaaacatc tgggaggtgg
     5041 tggcacacac ttttaatccc agcacccagg aggcagatgt aggcatgatc tctatgagtt
     5101 tgaggccagc ctggtctaca gatcaatagt tccagaacag ccagggctac aaagagagac
     5161 tcttgtctca aaataaataa ataaagggat gaggcaagaa ttaaaaacat agtcatagct
     5221 tttcccatga aatgaccaat tcttaaaaac atcagagttt ggactgctgg tgaaatctga
     5281 gtgtgtatat ctgaacagtc acttgcagaa ggagagaact tcatgtgtgg ctacagacac
     5341 acataagacc tttactttcc tacataaatg agtttttatt tacacctttt gctttttatt
     5401 tcatttgcct ttcaaactat tctacctaaa taggatgtat atatataaat accaaaagtc
     5461 ttttgaaaac atacacctat gttatttaag gatctaattg ttttactact gatttccctt
     5521 tgaaaatttg ctactgggaa acagtataca tgtagcttta ggggtgtcag tttaaaaatg
     5581 tattttaaga agtataactt attttctatg catcctaaaa ccaaatactc ttggcacaga
     5641 aagaattgtg ttagttttag tcttttcatt tctgagggtc ttttctacca acatgtccat
     5701 gaattaataa cactgacct
//
