LOCUS       XM_039105795            3129 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus golgin A2 (Golga2), transcript variant
            X11, mRNA.
ACCESSION   XM_039105795
VERSION     XM_039105795.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039105795.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3129
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3129
                     /gene="Golga2"
                     /gene_synonym="Gm130"
                     /note="golgin A2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 ESTs, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 103 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:64528"
                     /db_xref="RGD:620282"
     CDS             226..3129
                     /gene="Golga2"
                     /gene_synonym="Gm130"
                     /codon_start=1
                     /product="golgin subfamily A member 2 isoform X11"
                     /protein_id="XP_038961723.1"
                     /db_xref="GeneID:64528"
                     /db_xref="RGD:620282"
                     /translation="MWPPRFPPPRPGMSEETRQSKLAAAKKKLREYQQKNSPGVPAGA
                     KKKKKIKNGHSPERTSASDCQSAENSHDAGNCSNLMEETKTFSSTESLRQLSQQLNGL
                     VSESTSYINGEGLTSSNMKELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLD
                     QLEKEKKDYQQKLAKEQGALREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGE
                     SEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNE
                     DLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSNEQLQ
                     QAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEE
                     KEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQ
                     LRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALS
                     QNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETV
                     ELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQ
                     LQHEEVQGKMAAEMARQELQEAQERLKASSQENQQLQAQLSLLVLPGEGDMDQEEQDE
                     EVPQPSLTIPEDLVSREAMVAFCNAAIARAEEEQARLRVQLREQKARCRSLAHLAAPV
                     QSKLEKEAVVPRDMGDSVSEESNQALHVAMEKLQNRFLEVMQEKVELKERVEELEHCC
                     IQLSGETDTIGEYIALYQNQRAVLKARHLEKEEYISRLAQDKEEMKVKLLELQELVLR
                     LVNERNEWQGKFLAVSQNPADVPAPVPTGSQEFGAADQQGDLREVSLADDTEPAQGEA
                     GVPAPQENPTAQQIMQLLREIQNPQERPGLGSNPCIPFFYRADENDEVKIMVI"
ORIGIN      
        1 cgcgcgcagc tttcgtcgtt aactccaccc gtcgctcccg cctcgcgaca gcgtgaccac
       61 gcctccctgt cagtcatcat tctcatcaac caatgggctt ggagaaggta ggtcacgccg
      121 ggtttccgag cgtcctagtg aagctctgca cccgccttct ctggctcttg ttgaggagtc
      181 gtagctgccg gaagcagttt cgcggtggct gccgggatcg tggtgatgtg gcccccccgc
      241 ttcccccctc cccgccccgg gatgtcggaa gaaaccaggc agagcaaatt ggctgcggcc
      301 aagaaaaagc tgagagagta tcagcagaag aacagcccgg gtgtccctgc aggagcaaag
      361 aagaagaaaa agattaaaaa tggccatagt ccagagagaa cctctgccag tgattgtcag
      421 tcagcagaga atagccacga tgctggcaat tgctctaacc tcatggagga gaccaagact
      481 ttctcatcga ctgagagtct gcgacaactt tctcaacagc tcaatggcct tgtgtctgag
      541 tctacatcct acatcaacgg ggagggcctc acgtcttcca acatgaagga actggagagc
      601 cggtaccaag agctagcagt agccctggac tccagctatg taacaaacaa acaactcagt
      661 agcacgatag aggaattgaa gcaacagaac caagacactc tggatcaact ggaaaaagag
      721 aagaaggatt atcagcagaa gctggcaaag gagcagggtg ccctcaggga acaactgcag
      781 gttcacattc agaccatagg catcctggtg tctgagaagg cagaattaca gacagctctg
      841 gcccacactc agcaagcagc taggcagaaa gcaggagagt cggaggatct tgccagccgt
      901 ctacagtcct cccgacagcg tgtgggagag ctggagcgga cgttgtctac tgtgtcgacg
      961 cagcagaaac aggcagacag gtacaacaag gacctaacca aagagcgaga cgccctcaag
     1021 ctggagctat acaagaatgg caaaagtaat gaggacctga ggcagcagaa ctcagaactg
     1081 gaagagaaac ttcgagtcct ggtggcagag aaagcagctg cacagttggg ggcagaggag
     1141 ctgcagaaga agttagagat gtcagagctg ctgctgcaac agttctctag ccaatctgag
     1201 gcttctggca gtaatgagca gttgcaacag gccatggagg agcgggctca gctggagagc
     1261 catgttggcc agctgatgga gtcactgaaa cagctccagg tggagagaga ccagtacgca
     1321 gagaacctga aaggagagag tgccatgtgg cagcagaggg tacagcagat ggcagagcag
     1381 gtgcacgcac tgaaggaaga gaaggagcag agagaaagtc aggtacaaga gctggaggcc
     1441 agcttggctg aactcaggag tcagatggag gagccaccac ctccagagcc tccaactggg
     1501 ccttcagagg ccgaagagcg gctgcaggga gaggttgagc agctgcagaa ggaactggag
     1561 ggtctgacgg gtcagctgcg ggcccaggtg caggacaatg agagcctgag ccacctgaac
     1621 cgggagcagg agggacggct gctggagctg gagcgcgagg cccagcactg gagcgagcag
     1681 gcagaggagc gcaagcagat cctggagagc atgcagagtg accgcaccac catcagcaga
     1741 gcgctgtcac agaatcgcga gctcaaggag cagctggctg agctgcagaa cggcttcgtc
     1801 aggctgacaa atgagaacat ggagattacc agtgcgttac aatcagagca gcatgtcaag
     1861 aaagagctgg ccaggaagct gggagagctt caggagaggc tgggagagct gaaggagacg
     1921 gtggagctga agagccaaga agcacagggt ctgcaggagc agcgagacca gtgcctgtcc
     1981 cacctgcagc agtacgctgc cgcctaccaa cagcacttga cagcctatga gcagctgacc
     2041 tctgagaagg aggcactgca caagcagctt ctgctgcaga cacagctcat ggaccagttg
     2101 cagcatgagg aagttcaggg caagatggca gccgagatgg cccgccagga gctgcaggag
     2161 gcacaggagc gcctaaaagc tagcagccag gagaaccaac agctccaagc ccagctgagc
     2221 ctcttggtcc tccctgggga aggagatatg gaccaggagg agcaagacga ggaggttcct
     2281 cagcccagtc tgaccatccc agaagacctt gtcagtagag aggctatggt ggccttctgc
     2341 aatgcagcga tagccagagc tgaggaagag caggcccgac tccgcgtgca gctgagagag
     2401 cagaaggcac gttgccggag cttggctcac ttggcagccc cagtccaaag caagcttgaa
     2461 aaggaggcag tggtccccag ggatatgggt gactctgtat ctgaggagag caaccaggcc
     2521 ctacatgtag ccatggagaa gctgcagaac cgcttcctgg aggtcatgca ggagaaagtg
     2581 gagctcaagg agcgggtgga ggagcttgaa cattgctgta tccagctttc tggggagaca
     2641 gacactattg gagagtacat tgccctctac caaaaccaga gggcagtgct gaaggctcgg
     2701 catttggaga aggaagagta tatcagccgg ctggctcagg acaaggagga gatgaaggta
     2761 aaactgctag agcttcagga gctggtgttg aggcttgtga acgagcgcaa tgaatggcag
     2821 ggcaagttcc tggccgtgtc tcagaaccct gctgatgtgc ctgccccagt gcccacaggc
     2881 tcccaggaat ttggcgctgc tgaccagcaa ggtgacctca gggaggtgag cctggctgac
     2941 gatacagagc ctgcacaagg agaggcaggg gtacccgctc cccaggagaa ccccactgca
     3001 caacagatca tgcagctgct gcgtgagatc cagaaccccc aggagcgccc aggcctgggt
     3061 agcaaccctt gcatcccctt tttctaccgt gcggatgaga acgacgaggt gaaaatcatg
     3121 gttatataa
//
