LOCUS       NM_001398877            3662 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus G protein subunit beta 1 like (Gnb1l), mRNA.
ACCESSION   NM_001398877 XM_006248650
VERSION     NM_001398877.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3662)
  AUTHORS   Maynard,T.M., Meechan,D.W., Dudevoir,M.L., Gopalakrishna,D.,
            Peters,A.Z., Heindel,C.C., Sugimoto,T.J., Wu,Y., Lieberman,J.A. and
            Lamantia,A.S.
  TITLE     Mitochondrial localization and function of a subset of 22q11
            deletion syndrome candidate genes
  JOURNAL   Mol Cell Neurosci 39 (3), 439-451 (2008)
   PUBMED   18775783
REFERENCE   2  (bases 1 to 3662)
  AUTHORS   Paylor,R., Glaser,B., Mupo,A., Ataliotis,P., Spencer,C.,
            Sobotka,A., Sparks,C., Choi,C.H., Oghalai,J., Curran,S.,
            Murphy,K.C., Monks,S., Williams,N., O'Donovan,M.C., Owen,M.J.,
            Scambler,P.J. and Lindsay,E.
  TITLE     Tbx1 haploinsufficiency is linked to behavioral disorders in mice
            and humans: implications for 22q11 deletion syndrome
  JOURNAL   Proc Natl Acad Sci U S A 103 (20), 7729-7734 (2006)
   PUBMED   16684884
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Dec 27, 2021 this sequence version replaced XM_006248650.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.67667.1,
                                           SRR26643295.44041.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-169               JAXUCZ010000011.1  96011763-96011931   c
            170-264             JAXUCZ010000011.1  96011577-96011671   c
            265-405             JAXUCZ010000011.1  95963657-95963797   c
            406-531             JAXUCZ010000011.1  95963127-95963252   c
            532-694             JAXUCZ010000011.1  95959963-95960125   c
            695-793             JAXUCZ010000011.1  95955877-95955975   c
            794-1009            JAXUCZ010000011.1  95951591-95951806   c
            1010-3662           JAXUCZ010000011.1  95936961-95939613   c
FEATURES             Location/Qualifiers
     source          1..3662
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q23"
     gene            1..3662
                     /gene="Gnb1l"
                     /note="G protein subunit beta 1 like"
                     /db_xref="GeneID:680266"
                     /db_xref="RGD:1594165"
     exon            1..169
                     /gene="Gnb1l"
                     /inference="alignment:Splign:2.1.0"
     exon            170..264
                     /gene="Gnb1l"
                     /inference="alignment:Splign:2.1.0"
     exon            265..405
                     /gene="Gnb1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             281..1261
                     /gene="Gnb1l"
                     /note="guanine nucleotide binding protein (G protein),
                     beta polypeptide 1-like"
                     /codon_start=1
                     /product="guanine nucleotide-binding protein subunit
                     beta-like protein 1"
                     /protein_id="NP_001385806.1"
                     /db_xref="GeneID:680266"
                     /db_xref="RGD:1594165"
                     /translation="MAAPFPPPPSPRFVLRGTQSAVNTLHFCPAPGAAENPLLFSGSQ
                     NGLVHIWSLQTRRIVATLNGHGGQGVTWLKTLPQGQQLLSQGRDPRLCLWDLAEGRNT
                     VMDSVQLDSVGFCKSSILVRGQLCWMLAVPGKGSDEVQILEMPSKTSVCTLKPEADAK
                     PGMPMCLGLWQTNSSLRPLLLAGYEDGSVTLWDVSERKVCSQITCHEEPVMGLDFDSQ
                     KAKGVSGSAGKVLAVWSLDDQQSLQVKKTHELINPGIAEVTLRPDHRLFATAGWDHRI
                     RVFHWRTIKPLAVLAFHSAPVHCVAFAADGLLAAGSKDQRISVWSLYPCP"
     exon            406..531
                     /gene="Gnb1l"
                     /inference="alignment:Splign:2.1.0"
     exon            532..694
                     /gene="Gnb1l"
                     /inference="alignment:Splign:2.1.0"
     exon            695..793
                     /gene="Gnb1l"
                     /inference="alignment:Splign:2.1.0"
     exon            794..1009
                     /gene="Gnb1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1010..3662
                     /gene="Gnb1l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcgggcc gaggtgcgcg cgcagacccg cgggaaggct aacttggggc gtgcggagct
       61 ccggagcggg cacgtcgcgg gtggccgcgt acgccgaggg ggcgtggctg acgaggcacc
      121 cgcaagctcc taggatccgg ctgcgtcagg cttgcatctc cgcggcgggg tggctgtagg
      181 atcctgccct cggaagtacg cccctctgcc tggtgttcct gagcggatcc tctgaccccg
      241 gcggccctcc tggcgcagtc ttaggactgc atttacctac atggcagcac cgttcccacc
      301 gccgcctagt cccagatttg tcctccgagg cactcagtca gctgtgaaca cgctgcactt
      361 ctgcccagca cccggtgctg cagagaaccc actccttttc tcggggtctc agaatggcct
      421 agtgcacatc tggagcctac agacaagaag aatagttgcc actctaaacg gccacggggg
      481 ccagggtgta acctggctga agacactgcc gcagggacag cagctcctca gccagggccg
      541 ggacccgcgg ctgtgcctgt gggacctggc agagggcagg aacaccgtca tggactcagt
      601 tcagctggac agtgtgggct tctgcaagag ttccatcttg gtcaggggac agctctgctg
      661 gatgcttgct gtgccaggga agggcagcga cgaggttcag attctggaga tgccatccaa
      721 gacgtcagtg tgcaccctga agccggaggc agatgccaag ccaggcatgc ccatgtgcct
      781 ggggctgtgg cagactaact ccagtctccg ccccctcctt ctggctggct atgaggatgg
      841 atcggtaacc ctgtgggacg tctcagagcg gaaggtgtgc agccaaatca cctgccatga
      901 agagcctgtc atgggccttg acttcgactc tcagaaggcc aagggcgtct caggctcggc
      961 cgggaaggta ctggctgtct ggagtctgga cgatcagcag tccctgcagg tgaagaagac
     1021 ccatgagctc atcaatcctg gaattgccga ggtcaccctc cgtccagatc acaggctctt
     1081 cgccacagca ggctgggacc accgcatccg tgtgtttcac tggaggacaa ttaagccact
     1141 ggctgtcctg gctttccaca gcgctcctgt gcactgcgtg gcctttgccg ctgatggttt
     1201 gcttgctgca gggtccaagg accagcgaat cagcgtctgg tcactctacc cttgcccatg
     1261 acttagctgt ggggcactgc tgtcttactc cagtcttgac ccagcacagt ggaagctctt
     1321 cagatccctc caaggacaac aaactgtggc caaaggtctg tgagatccac tttctctgtg
     1381 agggtccctg ttccttttgt gactgtcatt cagatgatag acccctggca cctatccctt
     1441 ggtaacaggc atagcttaca cctggtagga ccagactaaa gatatttgac aataaatttc
     1501 ccattgccta cctgaagcct taaggtggga actttccacg aagacatccc tgtgctctcc
     1561 cctcagagtc agagcattca gattgtccgc tgaccagcct tccttgtgag ctgtagttct
     1621 gggtgcaggt tctcagtgct tgtccttggg aggctgtcag ttccacagtc tgctacacct
     1681 ctggcacatt gccccagaca tgttcagaga ctcttgacat ccagggctga ggtcagcatg
     1741 aggaacggat aaaactgggc tccctaaaga gggaggcaga aaagagttaa taatggggtg
     1801 accaaggtgg tcagggaagg agaacttaca gaacacagta taaggccaaa tagaagacca
     1861 ggaaaggagg ctctagcccc tgataggata aggtaaaggg atagcctgtc tcctagtgaa
     1921 cctgtgggta gcaagggaaa gtgcccatga caggccacaa gccagcccct ctgtagtgcc
     1981 cagggcacaa gcacagccat gtggtgtatg gagtaacaag gccttgagag tcaggagtga
     2041 gcatagcata tggctgacag gtgagcagcc tccgaggtag tgttgactgg gggctggggg
     2101 tggggttccg tataggtgag gaggatgcag ctaaggagtg tagacctccg acctttctcc
     2161 tcccatcatt gccagaaaga atcctgtgcc ccaaagtcct ggcatgcccc caagcgctgc
     2221 cctgccaggc actgctgacc ttagaatccc agctgccctt tggcctccag tctgtagcta
     2281 aacactccac atagcctgct gaggctgatg tggctgttaa aagtgtcaca ctaccacact
     2341 tcagcctggt gtccccaagc tggggagcac acgtgggagg ccaggaaagg agtgtgtggt
     2401 gcaggtgaag tgctatccgt ggcagggccc aaggaagcta gttggattgg aggtaagtta
     2461 gttagacaca gtccaaaagg tgagaagcca ggcaggagga ggaatccagg ggtgggaaga
     2521 tgggaatgtg gctggttatg ggtgggtcag gaggatgtgc cttcgcccca tactgagagg
     2581 cagttgccag ggggagccca gaatcctcag agggcttcct gtttgctcct ctctgcacac
     2641 ctgtgaagga tataacctgg tggtaagctc atgcacacag gaggtcctgg ctcccgctaa
     2701 ggccctggga cattaccata acagcacagc ctccagcttg gactctctaa atggagtggt
     2761 gatcattagc tgccacgtgg tgggaacgct cggaacaggc tatgaattgg gagccaccct
     2821 cagcagaacc tgaccggtgg agctctgtaa caggctggct ttcctggagt ctctagaaat
     2881 ggcatggacc aacttagtct acatgggcag aagcatgtag acctagtgag caggctgacc
     2941 caggtcatag gcatagtctt cttcactccc tttgaaggaa gtaccagcca gatactgctc
     3001 atccttctcc cagactccct cagggggcct gccacctatc ttattaccct ggggtggggg
     3061 tggagggcat gggtaggttg gttgcaggga aatcggtgag tccatctatg agtgggaaag
     3121 ataacccagt tcttgtctgt tcccaaaccc tgctgtgata cccaggcagc acagagcaat
     3181 gctgccctgt ggaatgctcc agttgtcttt taccagtgct tttggagatg acctcaagcc
     3241 tgtatagatc aatatggctg cttcagaaag cctcatctca cacaagttct gccaaatctt
     3301 acccacccct tcactgggag gtggtcacca gtgcgcacct gtccataggt tttctcggct
     3361 actcctgtac atgaatggtg tgtagccatt tcctccaaag cggagcagcc tttcctccct
     3421 caaagggagg aggcttataa gactcagttc tgaggctctc agggcccttg cccagagtta
     3481 caaaggcagt agcaattgct ggggagagaa cactccccag tggacttcct gtaagctagg
     3541 ccaggagctc cagggaaaca gcttctgtaa gagatcccca ggactagcct gggtgatctc
     3601 agctcccttg gagccaccta tgctccctaa agttacccca ataaagtcat tggttcacga
     3661 aa
//
