LOCUS       XM_006253927             986 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus geminin, DNA replication inhibitor
            (Gmnn), transcript variant X1, mRNA.
ACCESSION   XM_006253927
VERSION     XM_006253927.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006253927.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006253927.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..986
                     /gene="Gmnn"
                     /note="geminin, DNA replication inhibitor; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 10 ESTs, 10 long SRA reads, 5 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 223 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:291137"
                     /db_xref="RGD:1308137"
     CDS             161..781
                     /gene="Gmnn"
                     /codon_start=1
                     /product="geminin isoform X1"
                     /protein_id="XP_006253989.1"
                     /db_xref="GeneID:291137"
                     /db_xref="RGD:1308137"
                     /translation="MNLSMKQKQEGAQENVKSSPVPRRTLKMIQPSAAGSLVGRENEL
                     PKGLSKRKLWDDQLTSKISSCGPEANENNSVGDLTQEACDLMTKENPSSQYWKEVAEQ
                     RRKALYEALTENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQYMAEVIERLSNEPL
                     DNFESPDSQEFDSEKETVEYSEPEDSDTGTCAEETVSSSSDGTACT"
ORIGIN      
        1 tggctgaatg ccgaggctcc gcctctcagt gcgtcagcga ccggggcggc gggttagtct
       61 gcaggttcgg gtcgttttgg cgcggttggg tccggtgtgg tgccaggggc ttgtacggct
      121 ctcacgctcg ctgggaacgg agcactgctg tctctgagaa atgaatctca gtatgaagca
      181 gaaacaggaa ggagcccaag agaacgtgaa gagtagtcct gtcccaagga gaacgctgaa
      241 gatgatccag ccttctgcag ctgggtctct tgttggcaga gaaaatgagt tgccaaaagg
      301 cttgtccaaa aggaaacttt gggatgacca gttaacatct aagatttcaa gctgtggtcc
      361 tgaagccaat gaaaataaca gtgttggaga cctcacccag gaagcatgtg atcttatgac
      421 taaagaaaac ccatcttctc agtattggaa agaagtggca gaacaacgga ggaaagctct
      481 ctatgaagca cttacggaga acgagaaact tcataaagaa attgagcaga aggacagtga
      541 gattgcccgc ctgagaaagg agaataaaga cctggcagaa gtggctgagc acgtacagta
      601 catggcagag gtaatcgaga ggctgagtaa tgaacctctg gataactttg aatcaccgga
      661 tagtcaagaa tttgattctg aaaaagaaac tgttgagtat tctgaaccgg aagactcaga
      721 cactgggaca tgtgctgaag agactgtgtc ttcctcttcc gatggcacgg cgtgtacatg
      781 agatgtgact gccctttggt atagctcttg gtaaattaac tacatggtgc aagtgctgga
      841 atccaggagt cctggggtta ctaatacatt aaaaacagat agtatgtatt tttaacctgt
      901 tttatgtaaa taacattttc atttttgtca gtgtcagatg tgaattgtgt atattaaata
      961 aacttcaact tcctattgaa cattta
//
