LOCUS       XM_006248531            4878 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus geminin coiled-coil domain containing
            (Gmnc), transcript variant X1, mRNA.
ACCESSION   XM_006248531
VERSION     XM_006248531.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006248531.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006248531.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4878
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4878
                     /gene="Gmnc"
                     /note="geminin coiled-coil domain containing; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 20 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:498102"
                     /db_xref="RGD:1563170"
     CDS             549..1556
                     /gene="Gmnc"
                     /codon_start=1
                     /product="geminin coiled-coil domain-containing protein 1
                     isoform X1"
                     /protein_id="XP_006248593.1"
                     /db_xref="GeneID:498102"
                     /db_xref="RGD:1563170"
                     /translation="MNTILPCQDQYFVGGQSSNCPYSTTTSESGVDVSKETWVSFWAA
                     GLLDNSELQQAPHVLESPSGFSFPVPDSCSWEETELSSQLYRNKQLQDTLLQKEEELA
                     RLHEENNHLRQYLNSTLVKRLEEKAKKLLSSDEFSKVFGKLRKEKRKPKEHRHPPTEI
                     PQSKTAKRNLSTEFTNCEQQPGPHVDPWVLQTLGLKDLNTIDDTLPANYSATAVASHL
                     RTVPSTSSQFVHDEVGYANVPRDLHLDYVHQRTHASHTTSTHQDDCFSFPRLSNPPVR
                     VQTLPYHTADVSPNKTEVAFSTSLSPHCNVKTHSFHQGQAFVCRDEEGGWKFTWVPKQ
                     T"
ORIGIN      
        1 gggaatgcac agagcgccac tcacaccagg gccccttgga tgggctttag tgctgtgcag
       61 agaccaaggt ttggccttca gatgcctccg ggggctggct ggccgccctg cccggccccg
      121 ccctgccggc tgctgggcgc gtggcgcaga gcgagcaggg cagccaagac cccatcgccg
      181 gctgccaccg cgccaggtag actctgtaga ctgagctcac acaggcacag gctttgaccg
      241 ggcgggcgtg ccttggatgc tgcctccgcg tccgcaagga gacgcgcaga tctcacgtcc
      301 cagtgcgggt gtctcgggag tggccgtggc ttaggttggg cggctcccta ggcacgcacg
      361 tcaccttgtt tgacagcctc ctactaaatc agagagcagc gccggccagg agcctcgcgc
      421 gcgtcactgg cagctccggc ggattagaac tcgcctcctt gctcctccct gcagtcccgt
      481 ttaaagttaa ggctggcttt aagagaaagt tgagtgagcc tagtatcttc agcgctttct
      541 tctgcgacat gaacaccatt ctgccttgcc aagatcagta ttttgtagga ggccagagtt
      601 ctaattgccc gtattccact accacgtcag aatctggtgt tgacgtttcc aaggagactt
      661 gggtctcttt ctgggctgct ggtctcctgg acaactctga gctccaacag gcaccacatg
      721 tgttggaatc gcccagtggc ttcagtttcc ctgttcctga ctcgtgttca tgggaagaga
      781 ctgagctctc atcccagctc tacagaaata aacagctcca ggatactcta ctacagaagg
      841 aggaagaact tgctaggcta catgaagaga ataatcacct cagacaatac ctgaattcca
      901 ctttggttaa acgtctggaa gagaaggcca agaaattgtt gtcatcggat gagttttcca
      961 aagtgtttgg aaaactcagg aaagagaaga ggaaacccaa agaacacaga caccccccta
     1021 ctgagattcc ccagtccaaa actgccaaga gaaacctctc cacggagttt actaactgtg
     1081 aacaacaacc tgggccccat gtggacccct gggttcttca aacccttggg ttgaaagacc
     1141 tcaacaccat tgatgacacc ctaccagcta actacagtgc caccgctgtc gcctctcatc
     1201 tcagaacagt tcccagtaca tcctcccagt ttgtacacga tgaagttggc tatgctaatg
     1261 tccccagaga cctacacctt gactatgtac atcagagaac gcatgcctca catacaacct
     1321 ccactcacca ggatgattgt ttcagttttc ctaggctttc taatcctcca gtaagggtgc
     1381 aaactcttcc ttaccacact gcagatgtgt cacccaacaa gacagaggtg gccttttcca
     1441 cttctttgag ccctcactgc aatgtgaaaa cgcattcttt ccaccaggga caagcctttg
     1501 tgtgtcgaga tgaggaggga ggttggaagt ttacctgggt ccctaagcag acctagtgac
     1561 tcccttcttc tatcacagac tactgccagg atctccatct acgaagacct cttgcataag
     1621 gacttgacca ctgagaacac agcagccctt gcctgcctct tgccactgcc aatattcctt
     1681 taggttacac atgtaaactt gtagcgtatg gttgttcata aaccacacta atgggtctgc
     1741 tcttccttta ctcatatttg acccatttac atgttcatac ctgctgttgg ccttctctca
     1801 ttgtctggtg cctgggaata tattttctaa ttaccggtgc atttttgttt ttctgttttt
     1861 gttttttaag acaaaactgt tcttttccaa ttatggccag tttaacagta tatcatattc
     1921 agtcaaagtg taaacctggc ttccattcat cctctgcttg tctttatttc tgaaggctac
     1981 atttagagtg agtcccaatt ctctttcaca tacttgccac tggatgttta cagatggggg
     2041 tactgccctt tggcactact gaagacacag ggtggatgtg agtaacatca tatccatgga
     2101 agatcaaaca attaaatgta ccatagtgag tgtctcttaa acaaagctaa cctcactgat
     2161 aagcaatacc aatgacagat tacagcagtc aaaagaactg catctgcttt aaagtgtcac
     2221 gtggtatatt aatctctatt ggcagctaac attgtttctt tgagcaatac ggtacaaact
     2281 tctttgaggg actttaattt tttttttttt aaaaaaaagc aaggtttccc aaactataca
     2341 gagcctgaca actgtttcac tggaacagta agttgatgtt gtcttaccct tgttcaccct
     2401 tcattcagca attccaccaa aatatttatg gaatacgtag tatctgtgtt ggacaaggta
     2461 cagtgacata tgtcccaaga tcaacaacag cgccccagtt aaccttgaaa aagctatttg
     2521 atttgtgtga aggtttgact tttctgactc tagattacag gcagaagact aggaaaccac
     2581 taacattctg aatgtttgtg tgggttccat cagcttcagt ccaaaataac atcccagcct
     2641 attcccttta attttggtaa gtgatgcagg cattgcatag ggtttatata caatcaaaac
     2701 aagaaaaatg atgataagca atctatttgt agcatcacca attctgttct catatatttt
     2761 tcagcatcag ccagttttgt gtgttagtga gcctggtaga gaatcatttg catctaccaa
     2821 tagatacgaa ttaattctca gactgtgcat aggttgaatg caaatcctaa cagcaaggat
     2881 tcatcctttt ctagattaaa gaaatgttcc cacgtgtttg tttcctttcc accctgttct
     2941 tgtcagaatt aatcatacat catggacatt cacctgtact gtctgcacac agttcattac
     3001 tatttctttc tccatcatcc tcctcatcct gtcacttcac agaaagcacg tctgaaatgt
     3061 ctactgactg taattttttt gttagaaaga tgtgcctttg gtttttggtc tttgttctct
     3121 gttttagttt gatcataaaa ttcaaagaat ctgtgttata atttctatcg ctaatcagtt
     3181 ttgtttactg gtactcactg gggtgttttc ataacttatg gagcgataga acttttaaaa
     3241 gcttcctttt caaaagagtt ccttttacat tttagtatcc acatccctgg tgggtaatgt
     3301 caatctcatt ttagaataac aaagtgaaca ttagaataga ttgtgtgtta ctctgctagg
     3361 aattgtgtaa ataacacaat tactttgaaa gtcgaataca cagaaaatca aattggcaaa
     3421 caaatattta tgttacgttg tttaagcact gtattgtgtg atgtatgcca tgaagaaata
     3481 ctcaagttca gcacagtatt ttgggacaca aagaacagcc acatacacat cacagctttg
     3541 agatcatttc acatcaactt tgtctcagcc taatgtatag aagttacatc ccattgataa
     3601 cttgtttaga tgtataatat aaaaggtggt aacagaggga ttaccacata gtttttgcaa
     3661 ttatatcttg aaatttctca tatttatttg agttacatat agactctcat tttgttgatg
     3721 tgtaagaaat tccaaatttc attatgtgag tacatgttct gacttttatg ggttgatctt
     3781 tcctctccag ccatccactt aatattttac aaggtaaagt gacaaatgaa aaccctgtct
     3841 tttgctgaat gggatgggca ctttcacatg gtagaaatga tttccaaaaa tagatatcgc
     3901 tccttctagg ttgtaaccat aatcttctct atttgcacta attttgtaac atgtttatag
     3961 ctggattagt atcgttggga cttagggtta ctgattgttt cctttttcca ggtatataag
     4021 tgagactttt gaataatctg tggcctaaaa gggatcaaat gcttaatcag tgcaactgtc
     4081 ttaaacctac cttcacagga gaatttgaat ctaatgttga ttttaatcat attaataata
     4141 ttatattaat tattcaaaat tttatataat gtattttgat gactaatatc tccaacccct
     4201 cccagatcca ccttctctac ccttacaaac ccaatatctt tgctttgact tatttatgaa
     4261 tcaacctgat aggtttagtt cttataatat acatttatgg catacctatg ttttaaaata
     4321 tgtttaaatc ttcattttct tagatggaca tagacatttg gttttaattc ttacaaaaat
     4381 atctataaat gtcaagaaca atttacttct tggagtgtaa atgctaagat tttttttgat
     4441 tggaactatt tctaagtata taagtcaact ttgtaatcaa tctatgacca ataaattaca
     4501 taacttattt tattgccttt tgactcttat tttggaaatg atttgcagtg agtggaacag
     4561 tgttctaaga aagagaattt tgaacctatt tctgctatat attttgcatc ataaaatagg
     4621 ttttcctttc caaatcagtt ttttaaaagc acaattatta acaagggaga aactgtttac
     4681 ctgatatgac ctatgacagg ctttaatgat gatattagga tacaacatat tagctgcaaa
     4741 tgggaagcac cacttgaaca tgtttcatca aaggcaagga aactgctggc tctcaagaag
     4801 ggccatctgc tccaatggga actaatccat gttcaaggtt tggtcatggc aatctttcct
     4861 gagagaggct ataattgg
//
