LOCUS       NM_001007683            1644 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus glycosyltransferase 8 domain containing 1
            (Glt8d1), mRNA.
ACCESSION   NM_001007683 XM_224611
VERSION     NM_001007683.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079066.1.
            
            On Nov 29, 2004 this sequence version replaced XM_224611.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079066.1, SRR8487226.16047.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p16"
     gene            1..1644
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /note="glycosyltransferase 8 domain containing 1"
                     /db_xref="GeneID:306253"
                     /db_xref="RGD:1359293"
     exon            1..139
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /inference="alignment:Splign:2.1.0"
     exon            140..193
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /inference="alignment:Splign:2.1.0"
     CDS             178..1293
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /note="glycosyltransferase AD-017"
                     /codon_start=1
                     /product="glycosyltransferase 8 domain-containing protein
                     1"
                     /protein_id="NP_001007684.1"
                     /db_xref="GeneID:306253"
                     /db_xref="RGD:1359293"
                     /translation="MSFRKVTIIIWALAVILFLLALHHNFLSLSSLLRNDVSDSGIVG
                     LQPIDFTANFHQHPVNERQEEIPVVIAASEDRLGGTIAAINSIHQNTRSNVIFYIVTF
                     NRTADHLRSWLNSGSLKSIRYKIVNFDTKLLEGKVKEDPDQGESMKPLTFARFYLPIL
                     VPSAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVMIRGAGNQYNY
                     IGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNVTNQLEKWMKLNVEEGLYS
                     RTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLGSSAGKRYSPQFVKAAKLLHWNGHFK
                     PWGRAASYADVWEKWYIPDPTGKFSLIRRHMDTSNIK"
     exon            194..292
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /inference="alignment:Splign:2.1.0"
     exon            293..506
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /inference="alignment:Splign:2.1.0"
     exon            507..624
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /inference="alignment:Splign:2.1.0"
     exon            625..709
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /inference="alignment:Splign:2.1.0"
     exon            710..822
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /inference="alignment:Splign:2.1.0"
     exon            823..989
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /inference="alignment:Splign:2.1.0"
     exon            990..1102
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /inference="alignment:Splign:2.1.0"
     exon            1103..1619
                     /gene="Glt8d1"
                     /gene_synonym="Da2-24"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtccctcctc ccagcgcagg taaaggcggc agcgctgaac ctctgaaggc gacgattcgt
       61 cggacgccgc cctaacctgt ggtgtcagtg cgtggcggga tcccgggagc gcctcagcac
      121 gtccccatca ctcctaagcg attaattttt aatgtttatg taagacagaa gaaaaggatg
      181 tcattccgta aagtaaccat catcatctgg gccctggccg tcattctctt cctactggct
      241 ttgcaccata acttcctcag cttgagcagt ttgttaagga atgacgtttc agattcagga
      301 attgtggggc ttcagcccat agactttacc gcaaattttc atcaacatcc agtaaatgag
      361 agacaagaag agattcccgt ggttattgct gcctctgaag ataggctggg tgggaccatt
      421 gcagccataa atagcattca tcaaaacact cgctctaatg taatttttta cattgttaca
      481 ttcaatagaa cagcggacca tctcaggtcc tggcttaaca gtggttccct gaaaagcatc
      541 aggtacaaaa ttgtaaattt tgacactaaa cttttggaag ggaaagtaaa ggaggatcct
      601 gaccaggggg agtccatgaa accattaact tttgcaaggt tctacttgcc aattctggtt
      661 cccagtgcaa agaaggccat ttacatggat gacgatgtaa ttgtacaagg tgatatactt
      721 gccttataca ataccccact gaagccagga catgctgctg cattttcaga agactgtgac
      781 tcagcttcta ctaaagtcat gatccgtgga gcagggaacc agtacaatta cattggttat
      841 cttgactata aaaaggaaag aattcgtaag ctatccatga aagccagcac ctgctccttt
      901 aatcctggag tttttgttgc caacttgact gagtggaaaa gacagaatgt aactaaccag
      961 ctggaaaaat ggatgaagct caatgtagaa gagggactgt acagcagaac cctggctggc
     1021 agcatcacca cacctcctct gcttatcgta ttttatcagc agcattccac cattgaccct
     1081 atgtggaatg tccgccacct tggttccagt gctggaaaac ggtattcacc ccagtttgta
     1141 aaggctgcca agttacttca ctggaatggt cacttcaagc cttggggaag agctgcttca
     1201 tatgctgacg tttgggagaa atggtatatt ccagacccaa caggcaaatt tagtttaatc
     1261 cgaagacata tggatacctc aaacataaag tgaactacaa tctaagctaa acatgacact
     1321 caggaaatcc tggaagacac actatgtggg aagataacag ttgtagggct tgagagtctt
     1381 ctctgtacca accacagaaa acatgtcagc tgggtagaga tcacagatct ccagatgact
     1441 accaatgtct ccatctgcct taccaaatgt ttgcttactt actatactgc tgactgacct
     1501 gaaggacaga atgaggacac cagcctaagt tcattaagct gctgtaggta ggaactgctg
     1561 tttggtttta gttttgtaac ctgtggcctg gtttgtaaat aaaataaaac tttccaataa
     1621 aaaaaaaaaa aaaaaaaaaa aaaa
//
