LOCUS       XM_222147               3106 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glycosyltransferase 1 domain
            containing 1 (Glt1d1), transcript variant X1, mRNA.
ACCESSION   XM_222147
VERSION     XM_222147.10
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_222147.11.
            
            On Jan 21, 2021 this sequence version replaced XM_222147.9.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3106
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3106
                     /gene="Glt1d1"
                     /note="glycosyltransferase 1 domain containing 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     113 samples with support for all annotated introns"
                     /db_xref="GeneID:304445"
                     /db_xref="RGD:1304896"
     CDS             362..1402
                     /gene="Glt1d1"
                     /codon_start=1
                     /product="glycosyltransferase 1 domain-containing protein
                     1 isoform X1"
                     /protein_id="XP_222147.4"
                     /db_xref="GeneID:304445"
                     /db_xref="RGD:1304896"
                     /translation="MRLLFLAVLRPHTGNAVTAGRLRDHLEAAGHMCVLRDAFDFESP
                     SEIANLIVGENLEAALALHLYRGGRLLQGHGIPFGVIFGGTDLNEDANHKEKKEVMGK
                     VLEEARFAVAFTEAMKDTAEVQWPHATGKIFVQSQGIATIPNADFNWNTFLQQSEIDQ
                     SADDLHIFLVICGLRPVKDPLYLVDAFSEWHQETPNVYMVIVGPEVDPVFTREVKDRV
                     RRASGVRLIREMCQEDLHAVVKSCFALVNSSVSEGMSAAILEAMDLEVPVLARNIPGN
                     SAVVEHGVTGLLFSNPQEFIQLAKRLVSDPALEKEIVTNGREYVRTHHSWQVERDTYQ
                     RLIGKLEACSED"
ORIGIN      
        1 gcggggagac acagggtcac ctgtgttctt ggtccccgga acagtggaca ccctgccccc
       61 atcttcctga gctcgtggct gcctgacacc tggcctcgtg accctctccc cacccgctag
      121 tctcctcagg tcctctctgg cccccagctc tcccttctcc cttccctctc ctccccttcc
      181 cttcccctct cttctcctcc cctcccctct cctccgtgcc tttccccttc cttccctatc
      241 tctcccctct tcccctccct acccctgaac ctgcgggctc cgccttggag cagcgggcgg
      301 gaccgaatcc acctctaccc cgccgcccgg gcctggtggc ccagtccctg gctgtagcga
      361 catgcggctc ctgttcctgg cagtactgag gcctcacact ggcaacgcgg tcacggctgg
      421 gcgcctgcgg gaccacctag aagctgcagg ccacatgtgc gttctgagag atgcctttga
      481 ctttgaaagc ccatctgaaa tcgccaacct gatcgtgggc gagaatctgg aagcagcact
      541 agcccttcac ctctaccgag gaggcagact tctccaaggt catggcattc cttttggggt
      601 catctttggt ggaacggatt taaatgaaga tgccaatcac aaagaaaaaa aggaagtcat
      661 ggggaaagtt ctggaggaag ccaggtttgc ggtagctttc acagaggcaa tgaaggacac
      721 ggcagaggta cagtggccac atgcaactgg aaagatcttt gtccagagtc aaggaattgc
      781 aacaatacca aatgctgact ttaactggaa caccttcctc cagcaatcag agatcgacca
      841 aagcgctgac gacctgcaca tattccttgt catatgtgga ctcagaccag tgaaggatcc
      901 tttgtacctg gtggatgcct tctcagaatg gcatcaagaa acacccaatg tttacatggt
      961 gattgtaggt cctgaggtag atccagtatt tacaagggaa gtgaaagacc gggtaaggag
     1021 ggcgtcaggg gtgcgactga tccgagagat gtgccaggaa gatctgcatg cagtggtgaa
     1081 gagctgcttt gcgctggtca acagctcagt ctccgaggga atgtcagccg ccatcttgga
     1141 ggcaatggat ttagaagttc ccgtgctagc caggaacatc cctgggaact cggctgtggt
     1201 agagcatgga gtcacaggac tgctgttttc aaaccctcag gagtttattc agttggcaaa
     1261 gagactggtt agcgatcccg cactggagaa ggaaatcgtg accaacggaa gggaatacgt
     1321 gaggacacat cactcctggc aggtggaaag agacacctac cagcgcctca ttgggaagct
     1381 ggaggcgtgc tcggaggatt aagtgatgga agtctgtgct cgccacatct gtcccagtaa
     1441 ctgtcaagtg ctcagctctg ggtagatgcc acgaaatggg acccagtcct ggactactgg
     1501 gaccctagag tctgcaggaa cacatccacc cccaactctc ctcctgtgtg gcagacagtt
     1561 ctgctgtgct tacagctcag ttctggacgg acttatagct cacttctgag agtgcttgta
     1621 gctcagtccc agaggtgctt acagatcagt cctcagtgga cttgtaggct cactgctgaa
     1681 agttcttatg gctcagtccc agaagtgttt gcagctcagt gcaggagatg gaggtgtatc
     1741 tcaggggcct taggaggagt gttccaagaa ctgcttttac accttgtgga ggcttattta
     1801 taagcaacca cagagcagac ccttcccctg ccttcacaaa gaagaaacaa aaaggccagg
     1861 attgtcaatg gagtggaacc ggcagcagtt ttgatatgat cttgatctgc aggccaccgc
     1921 gggatcctga tgggcatgag agcggcggca ggggtgaggg gaggggaggc aagctgtggc
     1981 tggcacgcta acaagctctg gacaggctgt agctaggttg tatcaggttg ccttgctttt
     2041 cactggtgca caggagaacc tagcaagctt tccaaaatag gccctgccca ccagtatgac
     2101 atcacaagga gcctggacga tgattggatg gcccccacaa tggaggctgg aaccttgaat
     2161 tcagtgtagg cgttcttccc tatgactgct agggaattga ggatgagttt tgacttgaag
     2221 actccaggca acggtggtat ccaaggctgt gacaagaggt cactggggta tgggaggtca
     2281 gctttagggg atatcttttg atgagatctc cctacaacag cgctccgtac ctccagtggc
     2341 cccttccttg aatttcaaca aggctgtgct actgtgagca ggatgcggaa tagccacctg
     2401 tgctaaagca agcagcttgg aggaggaggg aagaagaatg cagccaagag ctacacgtgc
     2461 atagaaagta tcaggctctg gaggaaacgg aggaggagtc cgaatccaga tcatatttgc
     2521 tccaactcag aggcacatct gggccttttg cttttcttag cagtagcaag catctccttt
     2581 taagagaagc aggctggaag gaggcaaact ttgtaaacca gaacttcagg gatgaaatca
     2641 gagctcgatt ctataggatg caattctcgg ctttctagtc tgtacctcac atccagcacc
     2701 gtcactttca tgaaggctcc agcggaggca gcagcaatcc ggatgcattg cgcaatgaga
     2761 aatgtgtcca tttccttagc ccgaactgag ctggggtctt acctctctgg gcacaagaag
     2821 gggaagtagg tgggagggga ggttgagtaa ggaggcctga atctccagag cagctcttct
     2881 gagcccagag ttcaaaccca cctccggaga ggtgtgtaga ggattcaaag gtcaggtgtc
     2941 acgtttgttt acaagagcgg gatgctctga aatgcttgcc cctcctttgc ctggggatga
     3001 catcactgcc taactactct gccagcatca ctaagctaca tctgcaaatg cactttgggg
     3061 aagcaggggt tcttaactaa taaagcacgt taccatctgc catata
//
