LOCUS       NM_001004226            1598 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus glycosylated lysosomal membrane protein (Glmp),
            mRNA.
ACCESSION   NM_001004226 XM_215623
VERSION     NM_001004226.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Schieweck,O., Damme,M., Schroder,B., Hasilik,A., Schmidt,B. and
            Lubke,T.
  TITLE     NCU-G1 is a highly glycosylated integral membrane protein of the
            lysosome
  JOURNAL   Biochem J 422 (1), 83-90 (2009)
   PUBMED   19489740
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Sardiello,M., Palmieri,M., di Ronza,A., Medina,D.L., Valenza,M.,
            Gennarino,V.A., Di Malta,C., Donaudy,F., Embrione,V.,
            Polishchuk,R.S., Banfi,S., Parenti,G., Cattaneo,E. and Ballabio,A.
  TITLE     A gene network regulating lysosomal biogenesis and function
  JOURNAL   Science 325 (5939), 473-477 (2009)
   PUBMED   19556463
REFERENCE   3  (bases 1 to 1598)
  AUTHORS   Steffensen,K.R., Bouzga,M., Skjeldal,F., Kasi,C., Karahasan,A.,
            Matre,V., Bakke,O., Guerin,S. and Eskild,W.
  TITLE     Human NCU-G1 can function as a transcription factor and as a
            nuclear receptor co-activator
  JOURNAL   BMC Mol Biol 8, 106 (2007)
   PUBMED   18021396
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079294.1.
            
            On Sep 10, 2004 this sequence version replaced XM_215623.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079294.1, SRR8487226.14894.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1598
                     /gene="Glmp"
                     /gene_synonym="0610031j06rik; RGD1303130"
                     /note="glycosylated lysosomal membrane protein"
                     /db_xref="GeneID:295231"
                     /db_xref="RGD:1303130"
     exon            1..146
                     /gene="Glmp"
                     /gene_synonym="0610031j06rik; RGD1303130"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..1241
                     /gene="Glmp"
                     /gene_synonym="0610031j06rik; RGD1303130"
                     /note="lysosomal protein NCU-G1; kidney predominant
                     protein NCU-G1"
                     /codon_start=1
                     /product="glycosylated lysosomal membrane protein
                     precursor"
                     /protein_id="NP_001004226.1"
                     /db_xref="GeneID:295231"
                     /db_xref="RGD:1303130"
                     /translation="MLRCWGPHWGWVPWAPTPWLLLSLLVCTVPFGLLGEETRQVSME
                     VISGWPNPQNLLHIRAVGSNSTLHYVWSSLGPPAVVLVATNTTQSVLNVNWSLLLSPD
                     PAGALMVLPKNSIQFSSALVFTRLLEFDSTNVSEGTQPPGKPYPPYSLAKFSWNNVTN
                     SLDLATLSAIFRGHPVDDPTGAFANGSLTFKVQAFSRSGRPAQPPRLLHTADVCQVEV
                     ALVGASPRGNHSLFGLEVATLGQGPDCPSVNEQDSIDDEYAPAVFQLNRLLWGSSPSG
                     FMQWRPVAFSQEQRARESALACQASALHPTLAYPLPHSPIVQAFFGSQNNFCAFNLTF
                     GAPTGPGYWDQHYLCWSMLLGIGFPPVDSFSPLVLGIMAVALGAPGLMFLGGGLFLLL
                     RHKQYSEYQSIN"
     exon            147..401
                     /gene="Glmp"
                     /gene_synonym="0610031j06rik; RGD1303130"
                     /inference="alignment:Splign:2.1.0"
     exon            402..599
                     /gene="Glmp"
                     /gene_synonym="0610031j06rik; RGD1303130"
                     /inference="alignment:Splign:2.1.0"
     exon            600..818
                     /gene="Glmp"
                     /gene_synonym="0610031j06rik; RGD1303130"
                     /inference="alignment:Splign:2.1.0"
     exon            819..1075
                     /gene="Glmp"
                     /gene_synonym="0610031j06rik; RGD1303130"
                     /inference="alignment:Splign:2.1.0"
     exon            1076..1571
                     /gene="Glmp"
                     /gene_synonym="0610031j06rik; RGD1303130"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgctgagttt agctagctgt ggctgtatgt tacgctgttg gggacctcac tggggctggg
       61 tcccctgggc cccaacccca tggctccttt tgagtctact tgtgtgtaca gttccatttg
      121 gcctgctagg agaagagact cgccaggtat ctatggaagt tatttctggc tggccaaatc
      181 cccagaacct gcttcatatc cgggcagtgg gcagcaactc taccctgcac tatgtgtgga
      241 gcagcctggg gcctccagct gtggtgctgg tggccaccaa caccactcag agtgtcctga
      301 atgtcaactg gagtctcctg ctgtctcctg atcctgctgg ggccctgatg gtgctcccca
      361 agaacagcat tcagttttct tccgctcttg tcttcaccag gctgcttgag tttgacagca
      421 ccaatgtgtc agaggggaca cagcccccag gaaagccata ccctccgtac tccttggcca
      481 agttctcctg gaacaatgtc accaactcat tggatcttgc caccctgagt gccatctttc
      541 gaggccaccc tgtagatgac cctactggag catttgccaa tggcagcctg accttcaagg
      601 tccaggcctt ttctagatct ggtcgacctg cccagccccc tcgcctcctg cacacagccg
      661 atgtctgcca ggtagaagtg gccctggttg gagcttctcc tcgtggaaac cactccctat
      721 ttggtctaga ggtagccacc ttgggacagg gccccgactg cccctcagtg aacgaacagg
      781 actccatcga tgatgagtac gcacctgctg tcttccagct gaaccggttg ctgtggggct
      841 cttcaccgtc tggcttcatg caatggcggc cagtggcttt ctctcaggag cagcgggccc
      901 gagaatctgc cctcgcctgc caggcttctg ctcttcaccc caccttggca tatcctctcc
      961 ctcattcacc aattgttcaa gccttctttg ggtcccagaa caacttctgt gccttcaacc
     1021 tgacctttgg ggctcccaca ggccctggct actgggatca acactacctt tgctggtcaa
     1081 tgcttctggg cataggcttc cctccagtag attccttctc tccactagtc ctcggaatca
     1141 tggcggtagc cctgggagct ccaggactca tgtttctcgg gggaggccta tttctgctgc
     1201 tgcgccacaa gcagtattct gagtaccagt ccataaattg aagcctactc tccagaggga
     1261 cgggcagaac cacatcctct gccttgctgt gcctcaaact gtcagaagct ggagtgccag
     1321 tgctgtgatc tgcttctctg cagaacctca gaagccagcc tcaacctact ggggggctcc
     1381 cagtaagttg tccttccgaa cccacgggaa ggctacgatt actggtcccc cacattccca
     1441 tttcctgtgg atgaaacttg aaggcctaca tgagagtgac tgttggctgc cctaggggac
     1501 atgaaataga caatttcccc atacaagatt ccagtctcac tctgattttt aaattagatt
     1561 tatgtatttt aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
